RNA–Protein interactions for RNA: ENST00000508620.5

PAPD4-211, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 4

Gene PAPD4, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-211ENST00000508620 NISCHQ9Y2I1 1504 aa39.24■■■■□ 3.87
PAPD4-211ENST00000508620 CCDC180Q9P1Z9 1646 aa34.87■■■■□ 3.17
PAPD4-211ENST00000508620 ABCC9O60706 1549 aa34.04■■■■□ 3.04
PAPD4-211ENST00000508620 DCAF8L2P0C7V8 631 aa32.85■■■□□ 2.85
PAPD4-211ENST00000508620 RB1CC1Q8TDY2 1594 aa32.79■■■□□ 2.84
PAPD4-211ENST00000508620 NACADO15069 1562 aa32.77■■■□□ 2.84
PAPD4-211ENST00000508620 ZCCHC6Q5VYS8 1495 aaKnown RBP32.66■■■□□ 2.82
PAPD4-211ENST00000508620 MYO15BQ96JP2 1530 aa32.58■■■□□ 2.81
PAPD4-211ENST00000508620 DCAF1Q9Y4B6 1507 aa32.46■■■□□ 2.79
PAPD4-211ENST00000508620 UNC13AQ9UPW8 1703 aa32.09■■■□□ 2.73
PAPD4-211ENST00000508620 PABPN1Q86U42 306 aaKnown RBP eCLIP31.86■■■□□ 2.69
PAPD4-211ENST00000508620 SCRIBQ14160 1630 aa31.79■■■□□ 2.68
PAPD4-211ENST00000508620 BICRAQ9NZM4 1560 aa31.78■■■□□ 2.68
PAPD4-211ENST00000508620 SHROOM4Q9ULL8 1493 aa31.43■■■□□ 2.62
PAPD4-211ENST00000508620 DNAJC5BQ9UF47 199 aa31.23■■■□□ 2.59
PAPD4-211ENST00000508620 EIF4G1Q04637 1599 aaKnown RBP30.94■■■□□ 2.54
PAPD4-211ENST00000508620 CC2D2AQ9P2K1 1620 aa30.81■■■□□ 2.52
PAPD4-211ENST00000508620 CECR2Q9BXF3 1484 aa30.59■■■□□ 2.49
PAPD4-211ENST00000508620 SMARCA4P51532 1647 aa30.43■■■□□ 2.46
PAPD4-211ENST00000508620 BAZ1AQ9NRL2 1556 aaPredicted RBP30.41■■■□□ 2.46
PAPD4-211ENST00000508620 ATAD2BQ9ULI0 1458 aa30.25■■■□□ 2.43
PAPD4-211ENST00000508620 NCAPD3P42695 1498 aa30.24■■■□□ 2.43
PAPD4-211ENST00000508620 SMARCA2P51531 1590 aa30.23■■■□□ 2.43
PAPD4-211ENST00000508620 MROH2BQ7Z745 1585 aa30.23■■■□□ 2.43
PAPD4-211ENST00000508620 PEG3Q9GZU2 1588 aa30.12■■■□□ 2.41
PAPD4-211ENST00000508620 HMGXB3Q12766 1538 aa30.06■■■□□ 2.4
PAPD4-211ENST00000508620 BAZ1BQ9UIG0 1483 aaKnown RBP30■■■□□ 2.39
PAPD4-211ENST00000508620 WIZO95785 1651 aa29.93■■■□□ 2.38
PAPD4-211ENST00000508620 RSF1Q96T23 1441 aaPredicted RBP29.91■■■□□ 2.38
PAPD4-211ENST00000508620 TOP2AP11388 1531 aaKnown RBP29.59■■■□□ 2.33
PAPD4-211ENST00000508620 NESP48681 1621 aa29.48■■■□□ 2.31
PAPD4-211ENST00000508620 LAMC3Q9Y6N6 1575 aa29.43■■■□□ 2.3
PAPD4-211ENST00000508620 CADPSQ9ULU8 1353 aa29.37■■■□□ 2.29
PAPD4-211ENST00000508620 ERCC6Q03468 1493 aa29.36■■■□□ 2.29
PAPD4-211ENST00000508620 CCDC88BA6NC98 1476 aa29.27■■■□□ 2.28
PAPD4-211ENST00000508620 SUPT5HO00267 1087 aaKnown RBP29.25■■■□□ 2.27
PAPD4-211ENST00000508620 PDS5BQ9NTI5 1447 aa29.24■■■□□ 2.27
PAPD4-211ENST00000508620 CFTRP13569 1480 aa29.18■■■□□ 2.26
PAPD4-211ENST00000508620 KIF21AQ7Z4S6 1674 aa29.16■■■□□ 2.26
PAPD4-211ENST00000508620 PRDM2Q13029 1718 aa29.02■■■□□ 2.24
PAPD4-211ENST00000508620 CUX2O14529 1486 aa29.02■■■□□ 2.24
PAPD4-211ENST00000508620 FANCD2Q9BXW9 1451 aa29.01■■■□□ 2.23
PAPD4-211ENST00000508620 THOC2Q8NI27 1593 aaKnown RBP29.01■■■□□ 2.23
PAPD4-211ENST00000508620 CEP164Q9UPV0 1460 aa28.96■■■□□ 2.23
PAPD4-211ENST00000508620 MRC2Q9UBG0 1479 aa28.91■■■□□ 2.22
PAPD4-211ENST00000508620 WDR62O43379 1518 aa28.8■■■□□ 2.2
PAPD4-211ENST00000508620 URB2Q14146 1524 aaKnown RBP28.7■■■□□ 2.19
PAPD4-211ENST00000508620 ABCC8Q09428 1581 aa28.59■■■□□ 2.17
PAPD4-211ENST00000508620 TOPBP1Q92547 1522 aa28.55■■■□□ 2.16
PAPD4-211ENST00000508620 DNMBPQ6XZF7 1577 aa28.53■■■□□ 2.16
PAPD4-211ENST00000508620 IFT140Q96RY7 1462 aa28.37■■■□□ 2.13
PAPD4-211ENST00000508620 CUX1P39880 1505 aa28.34■■■□□ 2.13
PAPD4-211ENST00000508620 POLA1P09884 1462 aaPredicted RBP28.31■■■□□ 2.12
PAPD4-211ENST00000508620 FGD5Q6ZNL6 1462 aa28.25■■■□□ 2.11
PAPD4-211ENST00000508620 TARBP1Q13395 1621 aaKnown RBP28.25■■■□□ 2.11
PAPD4-211ENST00000508620 SOGA1O94964 1423 aa28.24■■■□□ 2.11
PAPD4-211ENST00000508620 ZNF608Q9ULD9 1512 aaPredicted RBP28.22■■■□□ 2.11
PAPD4-211ENST00000508620 WRNQ14191 1432 aaPredicted RBP eCLIP28.2■■■□□ 2.11
PAPD4-211ENST00000508620 RAD54L2Q9Y4B4 1467 aa28.2■■■□□ 2.1
PAPD4-211ENST00000508620 BIVM-ERCC5R4GMW8 1640 aa28.14■■■□□ 2.1
PAPD4-211ENST00000508620 TOP2BQ02880 1626 aa28.14■■■□□ 2.09
PAPD4-211ENST00000508620 SYNJ1O43426 1573 aa28.11■■■□□ 2.09
PAPD4-211ENST00000508620 DNAJC5Q9H3Z4 198 aa28.11■■■□□ 2.09
PAPD4-211ENST00000508620 EIF4G3O43432 1585 aaKnown RBP28.1■■■□□ 2.09
PAPD4-211ENST00000508620 AQRO60306 1485 aaKnown RBP eCLIP28.09■■■□□ 2.09
PAPD4-211ENST00000508620 TDRD9Q8NDG6 1382 aaKnown RBP28.05■■■□□ 2.08
PAPD4-211ENST00000508620 WDR97A6NE52 1622 aa28.03■■■□□ 2.08
PAPD4-211ENST00000508620 ABCA10Q8WWZ4 1543 aa27.99■■■□□ 2.07
PAPD4-211ENST00000508620 OSCARQ8IYS5 282 aa27.9■■■□□ 2.06
PAPD4-211ENST00000508620 GAPVD1Q14C86 1478 aa27.89■■■□□ 2.06
PAPD4-211ENST00000508620 GRIN2BQ13224 1484 aa27.87■■■□□ 2.05
PAPD4-211ENST00000508620 ABCA5Q8WWZ7 1642 aa27.85■■■□□ 2.05
PAPD4-211ENST00000508620 PBRM1Q86U86 1689 aa27.84■■■□□ 2.05
PAPD4-211ENST00000508620 SNAPC4Q5SXM2 1469 aa27.8■■■□□ 2.04
PAPD4-211ENST00000508620 FBLN2P98095 1184 aa27.79■■■□□ 2.04
PAPD4-211ENST00000508620 CHD1O14646 1710 aa27.78■■■□□ 2.04
PAPD4-211ENST00000508620 MAGI1Q96QZ7 1491 aaPredicted RBP27.78■■■□□ 2.04
PAPD4-211ENST00000508620 CHMP7Q8WUX9 453 aaPredicted RBP27.73■■■□□ 2.03
PAPD4-211ENST00000508620 SYNJ2O15056 1496 aa27.68■■■□□ 2.02
PAPD4-211ENST00000508620 ERICH3Q5RHP9 1530 aa27.66■■■□□ 2.02
PAPD4-211ENST00000508620 TRIM41Q8WV44 630 aa27.64■■■□□ 2.02
PAPD4-211ENST00000508620 KIF27Q86VH2 1401 aa27.63■■■□□ 2.01
PAPD4-211ENST00000508620 ADAMTS12P58397 1594 aa27.57■■■□□ 2
PAPD4-211ENST00000508620 FHAD1B1AJZ9 1412 aa27.57■■■□□ 2
PAPD4-211ENST00000508620 IGF1RP08069 1367 aa27.52■■■□□ 2
PAPD4-211ENST00000508620 GRIN2AQ12879 1464 aa27.5■■□□□ 1.99
PAPD4-211ENST00000508620 CLASP1Q7Z460 1538 aa27.44■■□□□ 1.98
PAPD4-211ENST00000508620 CUL7Q14999 1698 aa27.43■■□□□ 1.98
PAPD4-211ENST00000508620 RUSC2Q8N2Y8 1516 aa27.39■■□□□ 1.98
PAPD4-211ENST00000508620 RIMBP3CA6NJZ7 1639 aa27.38■■□□□ 1.97
PAPD4-211ENST00000508620 RIMBP3BA6NNM3 1639 aa27.38■■□□□ 1.97
PAPD4-211ENST00000508620 RIMBP3Q9UFD9 1639 aa27.38■■□□□ 1.97
PAPD4-211ENST00000508620 NUP160Q12769 1436 aa27.37■■□□□ 1.97
PAPD4-211ENST00000508620 ARHGEF11O15085 1522 aa27.36■■□□□ 1.97
PAPD4-211ENST00000508620 CARMIL1Q5VZK9 1371 aa27.36■■□□□ 1.97
PAPD4-211ENST00000508620 CEP170Q5SW79 1584 aa27.35■■□□□ 1.97
PAPD4-211ENST00000508620 CHIC1Q5VXU3 224 aa27.34■■□□□ 1.97
PAPD4-211ENST00000508620 RAPGEF2Q9Y4G8 1499 aa27.19■■□□□ 1.94
PAPD4-211ENST00000508620 CYB5RLQ6IPT4 315 aa27.18■■□□□ 1.94
PAPD4-211ENST00000508620 SHROOM2Q13796 1616 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms