RNA–Protein interactions for RNA: ENST00000428308.6

PAPD4-203, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PAPD4, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-203ENST00000428308 CHIC1Q5VXU3 224 aa14.78□□□□□ -0.04
PAPD4-203ENST00000428308 NISCHQ9Y2I1 1504 aa14.63□□□□□ -0.07
PAPD4-203ENST00000428308 AEBP2Q6ZN18 517 aaPredicted RBP13.99□□□□□ -0.17
PAPD4-203ENST00000428308 SLC24A1O60721 1099 aa13.55□□□□□ -0.24
PAPD4-203ENST00000428308 EHMT2Q96KQ7 1210 aa13.32□□□□□ -0.28
PAPD4-203ENST00000428308 ABCC9O60706 1549 aa13.24□□□□□ -0.29
PAPD4-203ENST00000428308 PHF23Q9BUL5 403 aaPredicted RBP13.24□□□□□ -0.29
PAPD4-203ENST00000428308 CCDC180Q9P1Z9 1646 aa12.87□□□□□ -0.35
PAPD4-203ENST00000428308 PLPPR3Q6T4P5 718 aa12.68□□□□□ -0.38
PAPD4-203ENST00000428308 DNAJC5BQ9UF47 199 aa12.67□□□□□ -0.38
PAPD4-203ENST00000428308 RTN4Q9NQC3 1192 aaKnown RBP12.57□□□□□ -0.4
PAPD4-203ENST00000428308 DCAF8L2P0C7V8 631 aa12.54□□□□□ -0.4
PAPD4-203ENST00000428308 KCNA4P22459 653 aa12.53□□□□□ -0.4
PAPD4-203ENST00000428308 CSRNP3Q8WYN3 585 aa12.53□□□□□ -0.4
PAPD4-203ENST00000428308 PABPN1Q86U42 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
PAPD4-203ENST00000428308 POTEDQ86YR6 584 aa12.43□□□□□ -0.42
PAPD4-203ENST00000428308 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
PAPD4-203ENST00000428308 RB1CC1Q8TDY2 1594 aa12.37□□□□□ -0.43
PAPD4-203ENST00000428308 NACADO15069 1562 aa12.25□□□□□ -0.45
PAPD4-203ENST00000428308 ZCCHC6Q5VYS8 1495 aaKnown RBP12.19□□□□□ -0.46
PAPD4-203ENST00000428308 NCBP3Q53F19 620 aaKnown RBP12.12□□□□□ -0.47
PAPD4-203ENST00000428308 BICRAQ9NZM4 1560 aa12.09□□□□□ -0.47
PAPD4-203ENST00000428308 SLC4A1APQ9BWU0 796 aaKnown RBP12.07□□□□□ -0.48
PAPD4-203ENST00000428308 UNC13AQ9UPW8 1703 aa12.06□□□□□ -0.48
PAPD4-203ENST00000428308 SCRIBQ14160 1630 aa12.01□□□□□ -0.49
PAPD4-203ENST00000428308 MYO15BQ96JP2 1530 aa12□□□□□ -0.49
PAPD4-203ENST00000428308 DCAF1Q9Y4B6 1507 aa11.93□□□□□ -0.5
PAPD4-203ENST00000428308 DAXXQ9UER7 740 aaPredicted RBP11.91□□□□□ -0.5
PAPD4-203ENST00000428308 SHROOM4Q9ULL8 1493 aa11.91□□□□□ -0.5
PAPD4-203ENST00000428308 CECR2Q9BXF3 1484 aa11.89□□□□□ -0.51
PAPD4-203ENST00000428308 ADRA2BP18089 450 aa11.85□□□□□ -0.51
PAPD4-203ENST00000428308 CC2D2AQ9P2K1 1620 aa11.85□□□□□ -0.51
PAPD4-203ENST00000428308 EIF4G1Q04637 1599 aaKnown RBP11.79□□□□□ -0.52
PAPD4-203ENST00000428308 PRKCSHP14314 528 aaPredicted RBP11.77□□□□□ -0.53
PAPD4-203ENST00000428308 ZBTB22O15209 634 aa11.61□□□□□ -0.55
PAPD4-203ENST00000428308 DNAJC5Q9H3Z4 198 aa11.59□□□□□ -0.55
PAPD4-203ENST00000428308 TAOK2Q9UL54 1235 aa11.52□□□□□ -0.56
PAPD4-203ENST00000428308 SENP3Q9H4L4 574 aaPredicted RBP11.5□□□□□ -0.57
PAPD4-203ENST00000428308 BCANQ96GW7 911 aa11.47□□□□□ -0.57
PAPD4-203ENST00000428308 ARXQ96QS3 562 aa11.47□□□□□ -0.57
PAPD4-203ENST00000428308 TIMELESSQ9UNS1 1208 aa11.44□□□□□ -0.58
PAPD4-203ENST00000428308 NCAPD3P42695 1498 aa11.4□□□□□ -0.58
PAPD4-203ENST00000428308 PLCB2Q00722 1185 aa11.4□□□□□ -0.58
PAPD4-203ENST00000428308 MROH2BQ7Z745 1585 aa11.38□□□□□ -0.59
PAPD4-203ENST00000428308 ERCC6Q03468 1493 aa11.38□□□□□ -0.59
PAPD4-203ENST00000428308 ATAD2BQ9ULI0 1458 aa11.38□□□□□ -0.59
PAPD4-203ENST00000428308 SMARCA4P51532 1647 aa11.37□□□□□ -0.59
PAPD4-203ENST00000428308 NESP48681 1621 aa11.36□□□□□ -0.59
PAPD4-203ENST00000428308 TPRNQ4KMQ1 711 aa11.32□□□□□ -0.6
PAPD4-203ENST00000428308 WIZO95785 1651 aa11.31□□□□□ -0.6
PAPD4-203ENST00000428308 BAZ1AQ9NRL2 1556 aaPredicted RBP11.29□□□□□ -0.6
PAPD4-203ENST00000428308 TULP1O00294 542 aaPredicted RBP11.29□□□□□ -0.6
PAPD4-203ENST00000428308 PPP6R1Q9UPN7 881 aa11.29□□□□□ -0.6
PAPD4-203ENST00000428308 CUX2O14529 1486 aa11.29□□□□□ -0.6
PAPD4-203ENST00000428308 NPM3O75607 178 aaKnown RBP11.26□□□□□ -0.61
PAPD4-203ENST00000428308 HAP1P54257 671 aaPredicted RBP11.24□□□□□ -0.61
PAPD4-203ENST00000428308 PPP4R3CPQ6ZMV5 832 aa11.24□□□□□ -0.61
PAPD4-203ENST00000428308 BAZ1BQ9UIG0 1483 aaKnown RBP11.23□□□□□ -0.61
PAPD4-203ENST00000428308 SMARCA2P51531 1590 aa11.23□□□□□ -0.61
PAPD4-203ENST00000428308 RSF1Q96T23 1441 aaPredicted RBP11.22□□□□□ -0.61
PAPD4-203ENST00000428308 FKBP8Q14318 412 aa11.22□□□□□ -0.61
PAPD4-203ENST00000428308 HMGXB3Q12766 1538 aa11.21□□□□□ -0.62
PAPD4-203ENST00000428308 SUPT5HO00267 1087 aaKnown RBP11.17□□□□□ -0.62
PAPD4-203ENST00000428308 PEG3Q9GZU2 1588 aa11.14□□□□□ -0.63
PAPD4-203ENST00000428308 HOMEZQ8IX15 550 aa11.13□□□□□ -0.63
PAPD4-203ENST00000428308 TRIM41Q8WV44 630 aa11.13□□□□□ -0.63
PAPD4-203ENST00000428308 PDS5BQ9NTI5 1447 aa11.1□□□□□ -0.63
PAPD4-203ENST00000428308 CADPSQ9ULU8 1353 aa11.09□□□□□ -0.63
PAPD4-203ENST00000428308 THOC2Q8NI27 1593 aaKnown RBP11.09□□□□□ -0.63
PAPD4-203ENST00000428308 LAMC3Q9Y6N6 1575 aa11.07□□□□□ -0.64
PAPD4-203ENST00000428308 FOXD4L1Q9NU39 408 aa11.06□□□□□ -0.64
PAPD4-203ENST00000428308 KIF21AQ7Z4S6 1674 aa11.04□□□□□ -0.64
PAPD4-203ENST00000428308 GTF3C3Q9Y5Q9 886 aa11.04□□□□□ -0.64
PAPD4-203ENST00000428308 VSIG10Q8N0Z9 540 aa11.03□□□□□ -0.64
PAPD4-203ENST00000428308 TOP2AP11388 1531 aaKnown RBP11.02□□□□□ -0.64
PAPD4-203ENST00000428308 MRC2Q9UBG0 1479 aa10.99□□□□□ -0.65
PAPD4-203ENST00000428308 CCDC88BA6NC98 1476 aa10.98□□□□□ -0.65
PAPD4-203ENST00000428308 RANGAP1P46060 587 aaPredicted RBP10.96□□□□□ -0.65
PAPD4-203ENST00000428308 FANCD2Q9BXW9 1451 aa10.95□□□□□ -0.66
PAPD4-203ENST00000428308 CEP164Q9UPV0 1460 aa10.93□□□□□ -0.66
PAPD4-203ENST00000428308 WDR62O43379 1518 aa10.93□□□□□ -0.66
PAPD4-203ENST00000428308 OSCARQ8IYS5 282 aa10.93□□□□□ -0.66
PAPD4-203ENST00000428308 CFTRP13569 1480 aa10.91□□□□□ -0.66
PAPD4-203ENST00000428308 ERICH6Q7L0X2 663 aa10.9□□□□□ -0.66
PAPD4-203ENST00000428308 URB2Q14146 1524 aaKnown RBP10.88□□□□□ -0.67
PAPD4-203ENST00000428308 KDM2AQ9Y2K7 1162 aa10.88□□□□□ -0.67
PAPD4-203ENST00000428308 PODXL2Q9NZ53 605 aa10.82□□□□□ -0.68
PAPD4-203ENST00000428308 ZNF608Q9ULD9 1512 aaPredicted RBP10.82□□□□□ -0.68
PAPD4-203ENST00000428308 TMEM132AQ24JP5 1023 aa10.81□□□□□ -0.68
PAPD4-203ENST00000428308 FBLN2P98095 1184 aa10.78□□□□□ -0.68
PAPD4-203ENST00000428308 CYB5RLQ6IPT4 315 aa10.77□□□□□ -0.69
PAPD4-203ENST00000428308 PRDM2Q13029 1718 aa10.76□□□□□ -0.69
PAPD4-203ENST00000428308 AQRO60306 1485 aaKnown RBP eCLIP10.73□□□□□ -0.69
PAPD4-203ENST00000428308 ABCC8Q09428 1581 aa10.73□□□□□ -0.69
PAPD4-203ENST00000428308 APLP2Q06481 763 aa10.72□□□□□ -0.69
PAPD4-203ENST00000428308 TOPBP1Q92547 1522 aa10.71□□□□□ -0.69
PAPD4-203ENST00000428308 C14orf37Q86TY3 774 aa10.71□□□□□ -0.69
PAPD4-203ENST00000428308 IFT140Q96RY7 1462 aa10.7□□□□□ -0.7
PAPD4-203ENST00000428308 TDRD9Q8NDG6 1382 aaKnown RBP10.68□□□□□ -0.7
PAPD4-203ENST00000428308 RIMBP3CA6NJZ7 1639 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms