RNA–Protein interactions for RNA: ENST00000557346.5

AP4S1-210, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

TSL 3

Gene AP4S1, Length 663 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-210ENST00000557346 AEBP2Q6ZN18 517 aaPredicted RBP21.71■■□□□ 1.07
AP4S1-210ENST00000557346 CHIC1Q5VXU3 224 aa20.95■□□□□ 0.94
AP4S1-210ENST00000557346 PHF23Q9BUL5 403 aaPredicted RBP18.44■□□□□ 0.54
AP4S1-210ENST00000557346 SENP3Q9H4L4 574 aaPredicted RBP18.36■□□□□ 0.53
AP4S1-210ENST00000557346 FOXD1Q16676 465 aa17.12■□□□□ 0.33
AP4S1-210ENST00000557346 PLPPR3Q6T4P5 718 aa16.85■□□□□ 0.29
AP4S1-210ENST00000557346 PPP6R1Q9UPN7 881 aa16.34■□□□□ 0.21
AP4S1-210ENST00000557346 ADRA2BP18089 450 aa16.25■□□□□ 0.19
AP4S1-210ENST00000557346 PIAS4Q8N2W9 510 aaPredicted RBP16.01■□□□□ 0.15
AP4S1-210ENST00000557346 POTEDQ86YR6 584 aa15.82■□□□□ 0.12
AP4S1-210ENST00000557346 MSH5O43196 834 aa15.81■□□□□ 0.12
AP4S1-210ENST00000557346 PPP4R3CPQ6ZMV5 832 aa14.84□□□□□ -0.03
AP4S1-210ENST00000557346 MAPK8IP2Q13387 824 aaPredicted RBP14.83□□□□□ -0.04
AP4S1-210ENST00000557346 SCAF1Q9H7N4 1312 aaKnown RBP14.79□□□□□ -0.04
AP4S1-210ENST00000557346 DMRT2Q9Y5R5 561 aa14.66□□□□□ -0.06
AP4S1-210ENST00000557346 CNKSR2Q8WXI2 1034 aa14.47□□□□□ -0.09
AP4S1-210ENST00000557346 NCBP3Q53F19 620 aaKnown RBP14.32□□□□□ -0.12
AP4S1-210ENST00000557346 HOXD11P31277 338 aaPredicted RBP14.31□□□□□ -0.12
AP4S1-210ENST00000557346 KCNA4P22459 653 aa14.29□□□□□ -0.12
AP4S1-210ENST00000557346 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.13
AP4S1-210ENST00000557346 NPM3O75607 178 aaKnown RBP14.2□□□□□ -0.14
AP4S1-210ENST00000557346 DNAJC5BQ9UF47 199 aa13.94□□□□□ -0.18
AP4S1-210ENST00000557346 DCAF8L1A6NGE4 600 aa13.87□□□□□ -0.19
AP4S1-210ENST00000557346 RNF39Q9H2S5 420 aa13.58□□□□□ -0.24
AP4S1-210ENST00000557346 SLC4A1APQ9BWU0 796 aaKnown RBP13.57□□□□□ -0.24
AP4S1-210ENST00000557346 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
AP4S1-210ENST00000557346 SLC4A2P04920 1241 aa13.51□□□□□ -0.25
AP4S1-210ENST00000557346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.49□□□□□ -0.25
AP4S1-210ENST00000557346 C1QBPQ07021 282 aaKnown RBP13.37□□□□□ -0.27
AP4S1-210ENST00000557346 U3KPZ7 1027 aaPredicted RBP13.36□□□□□ -0.27
AP4S1-210ENST00000557346 EHMT2Q96KQ7 1210 aa13.19□□□□□ -0.3
AP4S1-210ENST00000557346 ZBTB22O15209 634 aa13.18□□□□□ -0.3
AP4S1-210ENST00000557346 FOXD4L1Q9NU39 408 aa13.15□□□□□ -0.3
AP4S1-210ENST00000557346 MYCNP04198 464 aaPredicted RBP13.09□□□□□ -0.31
AP4S1-210ENST00000557346 CSRNP3Q8WYN3 585 aa13.03□□□□□ -0.32
AP4S1-210ENST00000557346 SPINK5Q9NQ38 1064 aaPredicted RBP13.03□□□□□ -0.32
AP4S1-210ENST00000557346 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.02□□□□□ -0.33
AP4S1-210ENST00000557346 HNRNPUL2Q1KMD3 747 aaKnown RBP13.02□□□□□ -0.33
AP4S1-210ENST00000557346 SAMD1Q6SPF0 538 aaPredicted RBP12.98□□□□□ -0.33
AP4S1-210ENST00000557346 APLP2Q06481 763 aa12.9□□□□□ -0.34
AP4S1-210ENST00000557346 CAPN15O75808 1086 aa12.89□□□□□ -0.35
AP4S1-210ENST00000557346 DSG3P32926 999 aa12.84□□□□□ -0.35
AP4S1-210ENST00000557346 ATF5Q9Y2D1 282 aaPredicted RBP12.82□□□□□ -0.36
AP4S1-210ENST00000557346 ZNF219Q9P2Y4 722 aaPredicted RBP12.81□□□□□ -0.36
AP4S1-210ENST00000557346 TRHP20396 242 aaPredicted RBP12.79□□□□□ -0.36
AP4S1-210ENST00000557346 ATXN8OSP0DMR3 200 aa12.75□□□□□ -0.37
AP4S1-210ENST00000557346 ABCB7O75027 752 aa12.66□□□□□ -0.38
AP4S1-210ENST00000557346 POLA2Q14181 598 aa12.58□□□□□ -0.4
AP4S1-210ENST00000557346 ZBTB12Q9Y330 459 aaPredicted RBP12.32□□□□□ -0.44
AP4S1-210ENST00000557346 POTEHQ6S545 545 aa12.29□□□□□ -0.44
AP4S1-210ENST00000557346 MKRN4PQ13434 485 aaPredicted RBP12.26□□□□□ -0.45
AP4S1-210ENST00000557346 FBLN2P98095 1184 aa12.17□□□□□ -0.46
AP4S1-210ENST00000557346 OSCARQ8IYS5 282 aa12.16□□□□□ -0.46
AP4S1-210ENST00000557346 RBM42Q9BTD8 480 aaKnown RBP12.16□□□□□ -0.46
AP4S1-210ENST00000557346 SPDYE2BA6NHP3 402 aa12.01□□□□□ -0.49
AP4S1-210ENST00000557346 SPDYE6P0CI01 402 aa12.01□□□□□ -0.49
AP4S1-210ENST00000557346 SPDYE2Q495Y8 402 aa12.01□□□□□ -0.49
AP4S1-210ENST00000557346 AKT1S1Q96B36 256 aa12.01□□□□□ -0.49
AP4S1-210ENST00000557346 SSUH2Q9Y2M2 353 aa11.96□□□□□ -0.49
AP4S1-210ENST00000557346 REM2Q8IYK8 340 aaPredicted RBP11.91□□□□□ -0.5
AP4S1-210ENST00000557346 ZNF692Q9BU19 519 aaPredicted RBP11.89□□□□□ -0.51
AP4S1-210ENST00000557346 SPDYE4A6NLX3 237 aa11.78□□□□□ -0.52
AP4S1-210ENST00000557346 FKBP8Q14318 412 aa11.78□□□□□ -0.52
AP4S1-210ENST00000557346 PITPNM1O00562 1244 aa11.77□□□□□ -0.53
AP4S1-210ENST00000557346 CHRDL2Q6WN34 429 aa11.77□□□□□ -0.53
AP4S1-210ENST00000557346 PABPN1Q86U42 306 aaKnown RBP eCLIP11.75□□□□□ -0.53
AP4S1-210ENST00000557346 PROM2Q8N271 834 aa11.69□□□□□ -0.54
AP4S1-210ENST00000557346 SPDYE1Q8NFV5 336 aaPredicted RBP11.69□□□□□ -0.54
AP4S1-210ENST00000557346 FXR2P51116 673 aaKnown RBP eCLIP11.64□□□□□ -0.55
AP4S1-210ENST00000557346 PIP4P2Q8N4L2 257 aa11.61□□□□□ -0.55
AP4S1-210ENST00000557346 CLEC11AQ9Y240 323 aa11.59□□□□□ -0.55
AP4S1-210ENST00000557346 PRR29P0C7W0 189 aa11.49□□□□□ -0.57
AP4S1-210ENST00000557346 STAG3Q9UJ98 1225 aa11.49□□□□□ -0.57
AP4S1-210ENST00000557346 PRKAR2AP13861 404 aaKnown RBP11.43□□□□□ -0.58
AP4S1-210ENST00000557346 CHADLQ6NUI6 762 aa11.4□□□□□ -0.58
AP4S1-210ENST00000557346 SP7Q8TDD2 431 aaPredicted RBP11.39□□□□□ -0.59
AP4S1-210ENST00000557346 CREBZFQ9NS37 354 aa11.39□□□□□ -0.59
AP4S1-210ENST00000557346 FBXO3Q9UK99 471 aa11.3□□□□□ -0.6
AP4S1-210ENST00000557346 MNX1P50219 401 aaPredicted RBP11.29□□□□□ -0.6
AP4S1-210ENST00000557346 EVX2Q03828 476 aa11.29□□□□□ -0.6
AP4S1-210ENST00000557346 FARP1Q9Y4F1 1045 aaPredicted RBP11.28□□□□□ -0.6
AP4S1-210ENST00000557346 C19orf67A6NJJ6 358 aa11.24□□□□□ -0.61
AP4S1-210ENST00000557346 HAX1O00165 279 aa11.21□□□□□ -0.61
AP4S1-210ENST00000557346 VASPP50552 380 aaPredicted RBP11.2□□□□□ -0.62
AP4S1-210ENST00000557346 MIER1Q8N108 512 aa11.18□□□□□ -0.62
AP4S1-210ENST00000557346 PLCD3Q8N3E9 789 aa11.16□□□□□ -0.62
AP4S1-210ENST00000557346 NPM1P06748 294 aaKnown RBP eCLIP11.09□□□□□ -0.63
AP4S1-210ENST00000557346 CD44P16070 742 aaKnown RBP11.08□□□□□ -0.64
AP4S1-210ENST00000557346 IFNLR1Q8IU57 520 aaPredicted RBP11.07□□□□□ -0.64
AP4S1-210ENST00000557346 PLEKHG5O94827 1062 aa11.06□□□□□ -0.64
AP4S1-210ENST00000557346 KLHL34Q8N239 644 aa11.02□□□□□ -0.65
AP4S1-210ENST00000557346 NUBP1P53384 320 aa11.01□□□□□ -0.65
AP4S1-210ENST00000557346 ZNF579Q8NAF0 562 aaKnown RBP10.99□□□□□ -0.65
AP4S1-210ENST00000557346 ZBTB47Q9UFB7 747 aaPredicted RBP10.99□□□□□ -0.65
AP4S1-210ENST00000557346 RASEFQ8IZ41 740 aa10.98□□□□□ -0.65
AP4S1-210ENST00000557346 ZRANB1Q9UGI0 708 aa10.98□□□□□ -0.65
AP4S1-210ENST00000557346 GABBR2O75899 941 aa10.95□□□□□ -0.66
AP4S1-210ENST00000557346 CCDC61Q9Y6R9 512 aa10.92□□□□□ -0.66
AP4S1-210ENST00000557346 PAK3O75914 559 aaPredicted RBP10.91□□□□□ -0.66
AP4S1-210ENST00000557346 SPOCK2Q92563 424 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms