RNA–Protein interactions for RNA: ENST00000554345.5

AP4S1-205, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

TSL 3 BASIC

Gene AP4S1, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-205ENST00000554345 NISCHQ9Y2I1 1504 aa27.51■■□□□ 1.99
AP4S1-205ENST00000554345 CCDC180Q9P1Z9 1646 aa24.33■■□□□ 1.49
AP4S1-205ENST00000554345 ABCC9O60706 1549 aa23.94■■□□□ 1.42
AP4S1-205ENST00000554345 DCAF8L2P0C7V8 631 aa23.12■■□□□ 1.29
AP4S1-205ENST00000554345 RB1CC1Q8TDY2 1594 aa22.93■■□□□ 1.26
AP4S1-205ENST00000554345 NACADO15069 1562 aa22.92■■□□□ 1.26
AP4S1-205ENST00000554345 ZCCHC6Q5VYS8 1495 aaKnown RBP22.88■■□□□ 1.25
AP4S1-205ENST00000554345 MYO15BQ96JP2 1530 aa22.77■■□□□ 1.24
AP4S1-205ENST00000554345 DCAF1Q9Y4B6 1507 aa22.7■■□□□ 1.22
AP4S1-205ENST00000554345 PABPN1Q86U42 306 aaKnown RBP eCLIP22.46■■□□□ 1.19
AP4S1-205ENST00000554345 UNC13AQ9UPW8 1703 aa22.41■■□□□ 1.18
AP4S1-205ENST00000554345 BICRAQ9NZM4 1560 aa22.3■■□□□ 1.16
AP4S1-205ENST00000554345 SCRIBQ14160 1630 aa22.29■■□□□ 1.16
AP4S1-205ENST00000554345 DNAJC5BQ9UF47 199 aa22.07■■□□□ 1.12
AP4S1-205ENST00000554345 SHROOM4Q9ULL8 1493 aa21.98■■□□□ 1.11
AP4S1-205ENST00000554345 EIF4G1Q04637 1599 aaKnown RBP21.68■■□□□ 1.06
AP4S1-205ENST00000554345 CC2D2AQ9P2K1 1620 aa21.59■■□□□ 1.05
AP4S1-205ENST00000554345 CECR2Q9BXF3 1484 aa21.5■■□□□ 1.03
AP4S1-205ENST00000554345 SUPT5HO00267 1087 aaKnown RBP21.41■■□□□ 1.02
AP4S1-205ENST00000554345 SMARCA4P51532 1647 aa21.3■■□□□ 1
AP4S1-205ENST00000554345 BAZ1AQ9NRL2 1556 aaPredicted RBP21.27■□□□□ 0.99
AP4S1-205ENST00000554345 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
AP4S1-205ENST00000554345 ATAD2BQ9ULI0 1458 aa21.23■□□□□ 0.99
AP4S1-205ENST00000554345 NCAPD3P42695 1498 aa21.21■□□□□ 0.99
AP4S1-205ENST00000554345 SMARCA2P51531 1590 aa21.14■□□□□ 0.97
AP4S1-205ENST00000554345 PEG3Q9GZU2 1588 aa21.07■□□□□ 0.96
AP4S1-205ENST00000554345 BAZ1BQ9UIG0 1483 aaKnown RBP21.03■□□□□ 0.96
AP4S1-205ENST00000554345 HMGXB3Q12766 1538 aa21.02■□□□□ 0.96
AP4S1-205ENST00000554345 RSF1Q96T23 1441 aaPredicted RBP21.01■□□□□ 0.95
AP4S1-205ENST00000554345 WIZO95785 1651 aa20.98■□□□□ 0.95
AP4S1-205ENST00000554345 CHIC1Q5VXU3 224 aa20.81■□□□□ 0.92
AP4S1-205ENST00000554345 NESP48681 1621 aa20.73■□□□□ 0.91
AP4S1-205ENST00000554345 TOP2AP11388 1531 aaKnown RBP20.71■□□□□ 0.91
AP4S1-205ENST00000554345 CADPSQ9ULU8 1353 aa20.62■□□□□ 0.89
AP4S1-205ENST00000554345 LAMC3Q9Y6N6 1575 aa20.57■□□□□ 0.88
AP4S1-205ENST00000554345 ERCC6Q03468 1493 aa20.57■□□□□ 0.88
AP4S1-205ENST00000554345 CCDC88BA6NC98 1476 aa20.56■□□□□ 0.88
AP4S1-205ENST00000554345 PDS5BQ9NTI5 1447 aa20.49■□□□□ 0.87
AP4S1-205ENST00000554345 CFTRP13569 1480 aa20.47■□□□□ 0.87
AP4S1-205ENST00000554345 KIF21AQ7Z4S6 1674 aa20.4■□□□□ 0.86
AP4S1-205ENST00000554345 FANCD2Q9BXW9 1451 aa20.35■□□□□ 0.85
AP4S1-205ENST00000554345 CUX2O14529 1486 aa20.31■□□□□ 0.84
AP4S1-205ENST00000554345 THOC2Q8NI27 1593 aaKnown RBP20.31■□□□□ 0.84
AP4S1-205ENST00000554345 CEP164Q9UPV0 1460 aa20.29■□□□□ 0.84
AP4S1-205ENST00000554345 MRC2Q9UBG0 1479 aa20.26■□□□□ 0.83
AP4S1-205ENST00000554345 TRIM41Q8WV44 630 aa20.21■□□□□ 0.83
AP4S1-205ENST00000554345 PRDM2Q13029 1718 aa20.19■□□□□ 0.82
AP4S1-205ENST00000554345 WDR62O43379 1518 aa20.16■□□□□ 0.82
AP4S1-205ENST00000554345 URB2Q14146 1524 aaKnown RBP20.16■□□□□ 0.82
AP4S1-205ENST00000554345 TOPBP1Q92547 1522 aa20.03■□□□□ 0.8
AP4S1-205ENST00000554345 ABCC8Q09428 1581 aa19.99■□□□□ 0.79
AP4S1-205ENST00000554345 DNMBPQ6XZF7 1577 aa19.96■□□□□ 0.79
AP4S1-205ENST00000554345 LOC105371045A0A1W2PR82 267 aa19.91■□□□□ 0.78
AP4S1-205ENST00000554345 CUX1P39880 1505 aa19.9■□□□□ 0.78
AP4S1-205ENST00000554345 IFT140Q96RY7 1462 aa19.88■□□□□ 0.77
AP4S1-205ENST00000554345 POLA1P09884 1462 aaPredicted RBP19.86■□□□□ 0.77
AP4S1-205ENST00000554345 ZNF608Q9ULD9 1512 aaPredicted RBP19.85■□□□□ 0.77
AP4S1-205ENST00000554345 RAD54L2Q9Y4B4 1467 aa19.83■□□□□ 0.77
AP4S1-205ENST00000554345 SOGA1O94964 1423 aa19.82■□□□□ 0.76
AP4S1-205ENST00000554345 FGD5Q6ZNL6 1462 aa19.82■□□□□ 0.76
AP4S1-205ENST00000554345 EEA1Q15075 1411 aa19.81■□□□□ 0.76
AP4S1-205ENST00000554345 DNAJC5Q9H3Z4 198 aa19.79■□□□□ 0.76
AP4S1-205ENST00000554345 TARBP1Q13395 1621 aaKnown RBP19.78■□□□□ 0.76
AP4S1-205ENST00000554345 WRNQ14191 1432 aaPredicted RBP eCLIP19.78■□□□□ 0.76
AP4S1-205ENST00000554345 AQRO60306 1485 aaKnown RBP eCLIP19.76■□□□□ 0.75
AP4S1-205ENST00000554345 TDRD9Q8NDG6 1382 aaKnown RBP19.74■□□□□ 0.75
AP4S1-205ENST00000554345 SYNJ1O43426 1573 aa19.71■□□□□ 0.75
AP4S1-205ENST00000554345 FAM9AQ8IZU1 332 aaPredicted RBP19.69■□□□□ 0.74
AP4S1-205ENST00000554345 TOP2BQ02880 1626 aa19.69■□□□□ 0.74
AP4S1-205ENST00000554345 EIF4G3O43432 1585 aaKnown RBP19.67■□□□□ 0.74
AP4S1-205ENST00000554345 BIVM-ERCC5R4GMW8 1640 aa19.66■□□□□ 0.74
AP4S1-205ENST00000554345 ABCA10Q8WWZ4 1543 aa19.61■□□□□ 0.73
AP4S1-205ENST00000554345 OSCARQ8IYS5 282 aa19.59■□□□□ 0.73
AP4S1-205ENST00000554345 WDR97A6NE52 1622 aa19.57■□□□□ 0.72
AP4S1-205ENST00000554345 GAPVD1Q14C86 1478 aa19.55■□□□□ 0.72
AP4S1-205ENST00000554345 CSRNP3Q8WYN3 585 aa19.55■□□□□ 0.72
AP4S1-205ENST00000554345 FBLN2P98095 1184 aa19.54■□□□□ 0.72
AP4S1-205ENST00000554345 GRIN2BQ13224 1484 aa19.53■□□□□ 0.72
AP4S1-205ENST00000554345 TRIM26Q12899 539 aaPredicted RBP19.51■□□□□ 0.71
AP4S1-205ENST00000554345 SNAPC4Q5SXM2 1469 aa19.51■□□□□ 0.71
AP4S1-205ENST00000554345 TNIKQ9UKE5 1360 aa19.5■□□□□ 0.71
AP4S1-205ENST00000554345 ABCA5Q8WWZ7 1642 aa19.49■□□□□ 0.71
AP4S1-205ENST00000554345 CHMP7Q8WUX9 453 aaPredicted RBP19.47■□□□□ 0.71
AP4S1-205ENST00000554345 PCGF6Q9BYE7 350 aa19.47■□□□□ 0.71
AP4S1-205ENST00000554345 GOLGA3Q08378 1498 aa19.45■□□□□ 0.7
AP4S1-205ENST00000554345 MAGI1Q96QZ7 1491 aaPredicted RBP19.45■□□□□ 0.7
AP4S1-205ENST00000554345 KIF21BO75037 1637 aa19.43■□□□□ 0.7
AP4S1-205ENST00000554345 PBRM1Q86U86 1689 aa19.43■□□□□ 0.7
AP4S1-205ENST00000554345 CHD1O14646 1710 aa19.42■□□□□ 0.7
AP4S1-205ENST00000554345 SYNJ2O15056 1496 aa19.4■□□□□ 0.7
AP4S1-205ENST00000554345 RUSC2Q8N2Y8 1516 aa19.4■□□□□ 0.7
AP4S1-205ENST00000554345 KIF27Q86VH2 1401 aa19.35■□□□□ 0.69
AP4S1-205ENST00000554345 IGF1RP08069 1367 aa19.35■□□□□ 0.69
AP4S1-205ENST00000554345 ERICH3Q5RHP9 1530 aa19.35■□□□□ 0.69
AP4S1-205ENST00000554345 CEP162Q5TB80 1403 aa19.34■□□□□ 0.69
AP4S1-205ENST00000554345 HRCP23327 699 aa19.34■□□□□ 0.69
AP4S1-205ENST00000554345 FHAD1B1AJZ9 1412 aa19.33■□□□□ 0.68
AP4S1-205ENST00000554345 ADAMTS12P58397 1594 aa19.31■□□□□ 0.68
AP4S1-205ENST00000554345 GRIN2AQ12879 1464 aa19.28■□□□□ 0.68
AP4S1-205ENST00000554345 UBTFP17480 764 aaKnown RBP19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms