RNA–Protein interactions for RNA: ENST00000473540.5

TRIM16-205, Transcript of tripartite motif containing 16, humanhuman

TSL 5

Gene TRIM16, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-205ENST00000473540 NISCHQ9Y2I1 1504 aa21.26■□□□□ 0.99
TRIM16-205ENST00000473540 CCDC180Q9P1Z9 1646 aa18.82■□□□□ 0.6
TRIM16-205ENST00000473540 ABCC9O60706 1549 aa18.46■□□□□ 0.55
TRIM16-205ENST00000473540 DCAF8L2P0C7V8 631 aa17.75■□□□□ 0.43
TRIM16-205ENST00000473540 NACADO15069 1562 aa17.7■□□□□ 0.42
TRIM16-205ENST00000473540 RB1CC1Q8TDY2 1594 aa17.7■□□□□ 0.42
TRIM16-205ENST00000473540 ZCCHC6Q5VYS8 1495 aaKnown RBP17.69■□□□□ 0.42
TRIM16-205ENST00000473540 MYO15BQ96JP2 1530 aa17.62■□□□□ 0.41
TRIM16-205ENST00000473540 DCAF1Q9Y4B6 1507 aa17.56■□□□□ 0.4
TRIM16-205ENST00000473540 UNC13AQ9UPW8 1703 aa17.41■□□□□ 0.38
TRIM16-205ENST00000473540 PABPN1Q86U42 306 aaKnown RBP eCLIP17.3■□□□□ 0.36
TRIM16-205ENST00000473540 BICRAQ9NZM4 1560 aa17.28■□□□□ 0.36
TRIM16-205ENST00000473540 SCRIBQ14160 1630 aa17.21■□□□□ 0.35
TRIM16-205ENST00000473540 DNAJC5BQ9UF47 199 aa17.07■□□□□ 0.32
TRIM16-205ENST00000473540 SHROOM4Q9ULL8 1493 aa16.94■□□□□ 0.3
TRIM16-205ENST00000473540 EIF4G1Q04637 1599 aaKnown RBP16.76■□□□□ 0.27
TRIM16-205ENST00000473540 CC2D2AQ9P2K1 1620 aa16.7■□□□□ 0.26
TRIM16-205ENST00000473540 CECR2Q9BXF3 1484 aa16.62■□□□□ 0.25
TRIM16-205ENST00000473540 SMARCA4P51532 1647 aa16.48■□□□□ 0.23
TRIM16-205ENST00000473540 BAZ1AQ9NRL2 1556 aaPredicted RBP16.43■□□□□ 0.22
TRIM16-205ENST00000473540 MROH2BQ7Z745 1585 aa16.42■□□□□ 0.22
TRIM16-205ENST00000473540 ATAD2BQ9ULI0 1458 aa16.4■□□□□ 0.22
TRIM16-205ENST00000473540 NCAPD3P42695 1498 aa16.39■□□□□ 0.21
TRIM16-205ENST00000473540 PEG3Q9GZU2 1588 aa16.32■□□□□ 0.2
TRIM16-205ENST00000473540 SMARCA2P51531 1590 aa16.31■□□□□ 0.2
TRIM16-205ENST00000473540 HMGXB3Q12766 1538 aa16.25■□□□□ 0.19
TRIM16-205ENST00000473540 WIZO95785 1651 aa16.24■□□□□ 0.19
TRIM16-205ENST00000473540 RSF1Q96T23 1441 aaPredicted RBP16.24■□□□□ 0.19
TRIM16-205ENST00000473540 BAZ1BQ9UIG0 1483 aaKnown RBP16.21■□□□□ 0.19
TRIM16-205ENST00000473540 NESP48681 1621 aa16.02■□□□□ 0.16
TRIM16-205ENST00000473540 TOP2AP11388 1531 aaKnown RBP16■□□□□ 0.15
TRIM16-205ENST00000473540 CADPSQ9ULU8 1353 aa15.9■□□□□ 0.14
TRIM16-205ENST00000473540 LAMC3Q9Y6N6 1575 aa15.89■□□□□ 0.13
TRIM16-205ENST00000473540 CCDC88BA6NC98 1476 aa15.88■□□□□ 0.13
TRIM16-205ENST00000473540 SUPT5HO00267 1087 aaKnown RBP15.83■□□□□ 0.12
TRIM16-205ENST00000473540 ERCC6Q03468 1493 aa15.82■□□□□ 0.12
TRIM16-205ENST00000473540 CFTRP13569 1480 aa15.81■□□□□ 0.12
TRIM16-205ENST00000473540 KIF21AQ7Z4S6 1674 aa15.79■□□□□ 0.12
TRIM16-205ENST00000473540 PDS5BQ9NTI5 1447 aa15.77■□□□□ 0.12
TRIM16-205ENST00000473540 THOC2Q8NI27 1593 aaKnown RBP15.72■□□□□ 0.11
TRIM16-205ENST00000473540 FANCD2Q9BXW9 1451 aa15.7■□□□□ 0.1
TRIM16-205ENST00000473540 CUX2O14529 1486 aa15.66■□□□□ 0.1
TRIM16-205ENST00000473540 PRDM2Q13029 1718 aa15.65■□□□□ 0.1
TRIM16-205ENST00000473540 CEP164Q9UPV0 1460 aa15.64■□□□□ 0.09
TRIM16-205ENST00000473540 MRC2Q9UBG0 1479 aa15.63■□□□□ 0.09
TRIM16-205ENST00000473540 WDR62O43379 1518 aa15.59■□□□□ 0.09
TRIM16-205ENST00000473540 URB2Q14146 1524 aaKnown RBP15.58■□□□□ 0.09
TRIM16-205ENST00000473540 TOPBP1Q92547 1522 aa15.47■□□□□ 0.07
TRIM16-205ENST00000473540 DNMBPQ6XZF7 1577 aa15.42■□□□□ 0.06
TRIM16-205ENST00000473540 ABCC8Q09428 1581 aa15.4■□□□□ 0.06
TRIM16-205ENST00000473540 CUX1P39880 1505 aa15.38■□□□□ 0.05
TRIM16-205ENST00000473540 POLA1P09884 1462 aaPredicted RBP15.33■□□□□ 0.05
TRIM16-205ENST00000473540 ZNF608Q9ULD9 1512 aaPredicted RBP15.33■□□□□ 0.05
TRIM16-205ENST00000473540 IFT140Q96RY7 1462 aa15.33■□□□□ 0.04
TRIM16-205ENST00000473540 TARBP1Q13395 1621 aaKnown RBP15.32■□□□□ 0.04
TRIM16-205ENST00000473540 RAD54L2Q9Y4B4 1467 aa15.31■□□□□ 0.04
TRIM16-205ENST00000473540 FGD5Q6ZNL6 1462 aa15.3■□□□□ 0.04
TRIM16-205ENST00000473540 SOGA1O94964 1423 aa15.27■□□□□ 0.04
TRIM16-205ENST00000473540 DNAJC5Q9H3Z4 198 aa15.26■□□□□ 0.03
TRIM16-205ENST00000473540 SYNJ1O43426 1573 aa15.25■□□□□ 0.03
TRIM16-205ENST00000473540 AQRO60306 1485 aaKnown RBP eCLIP15.25■□□□□ 0.03
TRIM16-205ENST00000473540 WRNQ14191 1432 aaPredicted RBP eCLIP15.25■□□□□ 0.03
TRIM16-205ENST00000473540 TOP2BQ02880 1626 aa15.22■□□□□ 0.03
TRIM16-205ENST00000473540 BIVM-ERCC5R4GMW8 1640 aa15.22■□□□□ 0.03
TRIM16-205ENST00000473540 TDRD9Q8NDG6 1382 aaKnown RBP15.22■□□□□ 0.03
TRIM16-205ENST00000473540 EIF4G3O43432 1585 aaKnown RBP15.2■□□□□ 0.02
TRIM16-205ENST00000473540 WDR97A6NE52 1622 aa15.17■□□□□ 0.02
TRIM16-205ENST00000473540 ABCA10Q8WWZ4 1543 aa15.15■□□□□ 0.02
TRIM16-205ENST00000473540 GAPVD1Q14C86 1478 aa15.08■□□□□ 0.01
TRIM16-205ENST00000473540 ABCA5Q8WWZ7 1642 aa15.08■□□□□ 0
TRIM16-205ENST00000473540 OSCARQ8IYS5 282 aa15.08■□□□□ 0
TRIM16-205ENST00000473540 GRIN2BQ13224 1484 aa15.06■□□□□ 0
TRIM16-205ENST00000473540 SNAPC4Q5SXM2 1469 aa15.05■□□□□ -0
TRIM16-205ENST00000473540 CHD1O14646 1710 aa15.04■□□□□ -0
TRIM16-205ENST00000473540 PBRM1Q86U86 1689 aa15.04■□□□□ -0
TRIM16-205ENST00000473540 MAGI1Q96QZ7 1491 aaPredicted RBP15.01□□□□□ -0.01
TRIM16-205ENST00000473540 FBLN2P98095 1184 aa15□□□□□ -0.01
TRIM16-205ENST00000473540 SYNJ2O15056 1496 aa14.96□□□□□ -0.01
TRIM16-205ENST00000473540 CHMP7Q8WUX9 453 aaPredicted RBP14.96□□□□□ -0.01
TRIM16-205ENST00000473540 ERICH3Q5RHP9 1530 aa14.94□□□□□ -0.02
TRIM16-205ENST00000473540 IGF1RP08069 1367 aa14.94□□□□□ -0.02
TRIM16-205ENST00000473540 ADAMTS12P58397 1594 aa14.92□□□□□ -0.02
TRIM16-205ENST00000473540 RUSC2Q8N2Y8 1516 aa14.92□□□□□ -0.02
TRIM16-205ENST00000473540 TRIM41Q8WV44 630 aa14.91□□□□□ -0.02
TRIM16-205ENST00000473540 KIF27Q86VH2 1401 aa14.91□□□□□ -0.02
TRIM16-205ENST00000473540 FHAD1B1AJZ9 1412 aa14.9□□□□□ -0.02
TRIM16-205ENST00000473540 GRIN2AQ12879 1464 aa14.88□□□□□ -0.03
TRIM16-205ENST00000473540 CLASP1Q7Z460 1538 aa14.87□□□□□ -0.03
TRIM16-205ENST00000473540 CEP170Q5SW79 1584 aa14.84□□□□□ -0.03
TRIM16-205ENST00000473540 RIMBP3CA6NJZ7 1639 aa14.84□□□□□ -0.03
TRIM16-205ENST00000473540 RIMBP3BA6NNM3 1639 aa14.84□□□□□ -0.03
TRIM16-205ENST00000473540 RIMBP3Q9UFD9 1639 aa14.84□□□□□ -0.03
TRIM16-205ENST00000473540 NUP160Q12769 1436 aa14.83□□□□□ -0.03
TRIM16-205ENST00000473540 CHIC1Q5VXU3 224 aa14.83□□□□□ -0.04
TRIM16-205ENST00000473540 ARHGEF11O15085 1522 aa14.82□□□□□ -0.04
TRIM16-205ENST00000473540 CARMIL1Q5VZK9 1371 aa14.8□□□□□ -0.04
TRIM16-205ENST00000473540 CUL7Q14999 1698 aa14.78□□□□□ -0.04
TRIM16-205ENST00000473540 ERCC6L2Q5T890 1561 aa14.73□□□□□ -0.05
TRIM16-205ENST00000473540 ARAP1Q96P48 1450 aa14.72□□□□□ -0.05
TRIM16-205ENST00000473540 SHROOM2Q13796 1616 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms