RNA–Protein interactions for RNA: ENST00000453514.5

PAPD4-204, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PAPD4, Length 3,523 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-204ENST00000453514 NISCHQ9Y2I1 1504 aa18.85■□□□□ 0.61
PAPD4-204ENST00000453514 DCAF8L2P0C7V8 631 aa16.25■□□□□ 0.19
PAPD4-204ENST00000453514 CCDC180Q9P1Z9 1646 aa16.23■□□□□ 0.19
PAPD4-204ENST00000453514 ZCCHC6Q5VYS8 1495 aaKnown RBP15.97■□□□□ 0.15
PAPD4-204ENST00000453514 ABCC9O60706 1549 aa15.67■□□□□ 0.1
PAPD4-204ENST00000453514 PELP1Q8IZL8 1130 aaKnown RBP15.67■□□□□ 0.1
PAPD4-204ENST00000453514 DCAF1Q9Y4B6 1507 aa15.6■□□□□ 0.09
PAPD4-204ENST00000453514 SHROOM4Q9ULL8 1493 aa15.55■□□□□ 0.08
PAPD4-204ENST00000453514 MYT1Q01538 1121 aa15.27■□□□□ 0.04
PAPD4-204ENST00000453514 MYO15BQ96JP2 1530 aa15.23■□□□□ 0.03
PAPD4-204ENST00000453514 HRCP23327 699 aa15.13■□□□□ 0.01
PAPD4-204ENST00000453514 SUPT5HO00267 1087 aaKnown RBP15.09■□□□□ 0.01
PAPD4-204ENST00000453514 PABPN1Q86U42 306 aaKnown RBP eCLIP15.02■□□□□ -0
PAPD4-204ENST00000453514 SCRIBQ14160 1630 aa14.95□□□□□ -0.02
PAPD4-204ENST00000453514 NACADO15069 1562 aa14.92□□□□□ -0.02
PAPD4-204ENST00000453514 CHIC1Q5VXU3 224 aa14.86□□□□□ -0.03
PAPD4-204ENST00000453514 RSF1Q96T23 1441 aaPredicted RBP14.81□□□□□ -0.04
PAPD4-204ENST00000453514 PPARGC1BQ86YN6 1023 aaKnown RBP14.78□□□□□ -0.04
PAPD4-204ENST00000453514 RB1CC1Q8TDY2 1594 aa14.75□□□□□ -0.05
PAPD4-204ENST00000453514 SCAF1Q9H7N4 1312 aaKnown RBP14.72□□□□□ -0.05
PAPD4-204ENST00000453514 UNC13AQ9UPW8 1703 aa14.7□□□□□ -0.06
PAPD4-204ENST00000453514 CECR2Q9BXF3 1484 aa14.67□□□□□ -0.06
PAPD4-204ENST00000453514 MROH2BQ7Z745 1585 aa14.63□□□□□ -0.07
PAPD4-204ENST00000453514 WIZO95785 1651 aa14.57□□□□□ -0.08
PAPD4-204ENST00000453514 TTBK1Q5TCY1 1321 aaPredicted RBP14.56□□□□□ -0.08
PAPD4-204ENST00000453514 EIF4G1Q04637 1599 aaKnown RBP14.54□□□□□ -0.08
PAPD4-204ENST00000453514 BAZ1AQ9NRL2 1556 aaPredicted RBP14.5□□□□□ -0.09
PAPD4-204ENST00000453514 BICRAQ9NZM4 1560 aa14.46□□□□□ -0.1
PAPD4-204ENST00000453514 PCGF6Q9BYE7 350 aa14.45□□□□□ -0.1
PAPD4-204ENST00000453514 SMARCA4P51532 1647 aa14.41□□□□□ -0.1
PAPD4-204ENST00000453514 TOP2AP11388 1531 aaKnown RBP14.33□□□□□ -0.12
PAPD4-204ENST00000453514 LOC105371045A0A1W2PR82 267 aa14.31□□□□□ -0.12
PAPD4-204ENST00000453514 SMARCA2P51531 1590 aa14.29□□□□□ -0.12
PAPD4-204ENST00000453514 PEG3Q9GZU2 1588 aa14.28□□□□□ -0.12
PAPD4-204ENST00000453514 PRKCSHP14314 528 aaPredicted RBP14.22□□□□□ -0.13
PAPD4-204ENST00000453514 CCDC88BA6NC98 1476 aa14.21□□□□□ -0.14
PAPD4-204ENST00000453514 BCL11AQ9H165 835 aa14.2□□□□□ -0.14
PAPD4-204ENST00000453514 ACIN1Q9UKV3 1341 aaKnown RBP14.13□□□□□ -0.15
PAPD4-204ENST00000453514 TRIM41Q8WV44 630 aa14.11□□□□□ -0.15
PAPD4-204ENST00000453514 ABCC8Q09428 1581 aa14.1□□□□□ -0.15
PAPD4-204ENST00000453514 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
PAPD4-204ENST00000453514 FAM9AQ8IZU1 332 aaPredicted RBP14.08□□□□□ -0.16
PAPD4-204ENST00000453514 NEUROD1Q13562 356 aa14.05□□□□□ -0.16
PAPD4-204ENST00000453514 GTF3C3Q9Y5Q9 886 aa14.05□□□□□ -0.16
PAPD4-204ENST00000453514 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
PAPD4-204ENST00000453514 ATAD2BQ9ULI0 1458 aa14.01□□□□□ -0.17
PAPD4-204ENST00000453514 CENPBP07199 599 aaPredicted RBP13.99□□□□□ -0.17
PAPD4-204ENST00000453514 ZEB1P37275 1124 aaPredicted RBP13.94□□□□□ -0.18
PAPD4-204ENST00000453514 BAZ1BQ9UIG0 1483 aaKnown RBP13.93□□□□□ -0.18
PAPD4-204ENST00000453514 SYNJ1O43426 1573 aa13.91□□□□□ -0.18
PAPD4-204ENST00000453514 RUSC2Q8N2Y8 1516 aa13.9□□□□□ -0.18
PAPD4-204ENST00000453514 SOGA1O94964 1423 aa13.89□□□□□ -0.19
PAPD4-204ENST00000453514 TRIM26Q12899 539 aaPredicted RBP13.88□□□□□ -0.19
PAPD4-204ENST00000453514 ERICH6Q7L0X2 663 aa13.85□□□□□ -0.19
PAPD4-204ENST00000453514 HMGXB3Q12766 1538 aa13.83□□□□□ -0.2
PAPD4-204ENST00000453514 NCAPD3P42695 1498 aa13.8□□□□□ -0.2
PAPD4-204ENST00000453514 CC2D2AQ9P2K1 1620 aa13.8□□□□□ -0.2
PAPD4-204ENST00000453514 BIVM-ERCC5R4GMW8 1640 aa13.8□□□□□ -0.2
PAPD4-204ENST00000453514 WRNQ14191 1432 aaPredicted RBP eCLIP13.79□□□□□ -0.2
PAPD4-204ENST00000453514 APLP2Q06481 763 aa13.78□□□□□ -0.2
PAPD4-204ENST00000453514 EEA1Q15075 1411 aa13.77□□□□□ -0.2
PAPD4-204ENST00000453514 TOP2BQ02880 1626 aa13.77□□□□□ -0.21
PAPD4-204ENST00000453514 KIF21BO75037 1637 aa13.76□□□□□ -0.21
PAPD4-204ENST00000453514 TNIKQ9UKE5 1360 aa13.73□□□□□ -0.21
PAPD4-204ENST00000453514 ANP32EQ9BTT0 268 aa13.73□□□□□ -0.21
PAPD4-204ENST00000453514 PRDM2Q13029 1718 aa13.72□□□□□ -0.21
PAPD4-204ENST00000453514 CEP162Q5TB80 1403 aa13.7□□□□□ -0.22
PAPD4-204ENST00000453514 RANGAP1P46060 587 aaPredicted RBP13.69□□□□□ -0.22
PAPD4-204ENST00000453514 CSRNP3Q8WYN3 585 aa13.65□□□□□ -0.22
PAPD4-204ENST00000453514 GOLGA3Q08378 1498 aa13.64□□□□□ -0.23
PAPD4-204ENST00000453514 CUX1P39880 1505 aa13.64□□□□□ -0.23
PAPD4-204ENST00000453514 CFTRP13569 1480 aa13.64□□□□□ -0.23
PAPD4-204ENST00000453514 CEP164Q9UPV0 1460 aa13.59□□□□□ -0.23
PAPD4-204ENST00000453514 RAPGEF2Q9Y4G8 1499 aa13.58□□□□□ -0.24
PAPD4-204ENST00000453514 NESP48681 1621 aa13.57□□□□□ -0.24
PAPD4-204ENST00000453514 PRXQ9BXM0 1461 aa13.56□□□□□ -0.24
PAPD4-204ENST00000453514 CADPSQ9ULU8 1353 aa13.55□□□□□ -0.24
PAPD4-204ENST00000453514 ERICH3Q5RHP9 1530 aa13.53□□□□□ -0.24
PAPD4-204ENST00000453514 ERCC6Q03468 1493 aa13.53□□□□□ -0.24
PAPD4-204ENST00000453514 UBTFP17480 764 aaKnown RBP13.51□□□□□ -0.25
PAPD4-204ENST00000453514 DIEXFQ68CQ4 756 aaKnown RBP13.49□□□□□ -0.25
PAPD4-204ENST00000453514 FBLN2P98095 1184 aa13.46□□□□□ -0.25
PAPD4-204ENST00000453514 CLIP1P30622 1438 aa13.45□□□□□ -0.26
PAPD4-204ENST00000453514 VPS8Q8N3P4 1428 aa13.43□□□□□ -0.26
PAPD4-204ENST00000453514 ARAP1Q96P48 1450 aa13.43□□□□□ -0.26
PAPD4-204ENST00000453514 PDS5BQ9NTI5 1447 aa13.41□□□□□ -0.26
PAPD4-204ENST00000453514 FANCD2Q9BXW9 1451 aa13.4□□□□□ -0.26
PAPD4-204ENST00000453514 TSHZ2Q9NRE2 1034 aa13.35□□□□□ -0.27
PAPD4-204ENST00000453514 YTHDC1Q96MU7 727 aaKnown RBP13.34□□□□□ -0.27
PAPD4-204ENST00000453514 KIF27Q86VH2 1401 aa13.33□□□□□ -0.27
PAPD4-204ENST00000453514 WDR97A6NE52 1622 aa13.33□□□□□ -0.28
PAPD4-204ENST00000453514 FGD5Q6ZNL6 1462 aa13.32□□□□□ -0.28
PAPD4-204ENST00000453514 ATP1B4Q9UN42 357 aaPredicted RBP13.32□□□□□ -0.28
PAPD4-204ENST00000453514 IGF1RP08069 1367 aa13.31□□□□□ -0.28
PAPD4-204ENST00000453514 ARHGAP35Q9NRY4 1499 aa13.31□□□□□ -0.28
PAPD4-204ENST00000453514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.3□□□□□ -0.28
PAPD4-204ENST00000453514 TDRD9Q8NDG6 1382 aaKnown RBP13.3□□□□□ -0.28
PAPD4-204ENST00000453514 DNMBPQ6XZF7 1577 aa13.28□□□□□ -0.28
PAPD4-204ENST00000453514 ANO8Q9HCE9 1232 aaPredicted RBP13.25□□□□□ -0.29
PAPD4-204ENST00000453514 CUX2O14529 1486 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms