RNA–Protein interactions for RNA: ENST00000513259.5

SNHG4-207, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 5

Gene SNHG4, Length 444 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-207ENST00000513259 AEBP2Q6ZN18 517 aaPredicted RBP23.57■■□□□ 1.36
SNHG4-207ENST00000513259 CHIC1Q5VXU3 224 aa22.76■■□□□ 1.23
SNHG4-207ENST00000513259 NISCHQ9Y2I1 1504 aa22.57■■□□□ 1.2
SNHG4-207ENST00000513259 ABCC9O60706 1549 aa20.65■□□□□ 0.9
SNHG4-207ENST00000513259 CCDC180Q9P1Z9 1646 aa20.34■□□□□ 0.85
SNHG4-207ENST00000513259 SENP3Q9H4L4 574 aaPredicted RBP20.21■□□□□ 0.83
SNHG4-207ENST00000513259 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
SNHG4-207ENST00000513259 DNAJC5BQ9UF47 199 aa19.65■□□□□ 0.74
SNHG4-207ENST00000513259 RB1CC1Q8TDY2 1594 aa19.49■□□□□ 0.71
SNHG4-207ENST00000513259 NACADO15069 1562 aa19.29■□□□□ 0.68
SNHG4-207ENST00000513259 DCAF8L2P0C7V8 631 aa19.24■□□□□ 0.67
SNHG4-207ENST00000513259 PABPN1Q86U42 306 aaKnown RBP eCLIP19.22■□□□□ 0.67
SNHG4-207ENST00000513259 UNC13AQ9UPW8 1703 aa19.11■□□□□ 0.65
SNHG4-207ENST00000513259 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
SNHG4-207ENST00000513259 MYO15BQ96JP2 1530 aa18.91■□□□□ 0.62
SNHG4-207ENST00000513259 FOXD1Q16676 465 aa18.7■□□□□ 0.58
SNHG4-207ENST00000513259 ZCCHC6Q5VYS8 1495 aaKnown RBP18.63■□□□□ 0.57
SNHG4-207ENST00000513259 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
SNHG4-207ENST00000513259 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
SNHG4-207ENST00000513259 SHROOM4Q9ULL8 1493 aa18.6■□□□□ 0.57
SNHG4-207ENST00000513259 DCAF1Q9Y4B6 1507 aa18.59■□□□□ 0.57
SNHG4-207ENST00000513259 SCRIBQ14160 1630 aa18.56■□□□□ 0.56
SNHG4-207ENST00000513259 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
SNHG4-207ENST00000513259 PLPPR3Q6T4P5 718 aa18.38■□□□□ 0.53
SNHG4-207ENST00000513259 DNAJC5Q9H3Z4 198 aa18.19■□□□□ 0.5
SNHG4-207ENST00000513259 CUX2O14529 1486 aa17.84■□□□□ 0.45
SNHG4-207ENST00000513259 NCAPD3P42695 1498 aa17.82■□□□□ 0.44
SNHG4-207ENST00000513259 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
SNHG4-207ENST00000513259 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
SNHG4-207ENST00000513259 NESP48681 1621 aa17.68■□□□□ 0.42
SNHG4-207ENST00000513259 SMARCA4P51532 1647 aa17.66■□□□□ 0.42
SNHG4-207ENST00000513259 PPP6R1Q9UPN7 881 aa17.66■□□□□ 0.42
SNHG4-207ENST00000513259 SMARCA2P51531 1590 aa17.66■□□□□ 0.42
SNHG4-207ENST00000513259 ADRA2BP18089 450 aa17.65■□□□□ 0.42
SNHG4-207ENST00000513259 HMGXB3Q12766 1538 aa17.64■□□□□ 0.41
SNHG4-207ENST00000513259 PIAS4Q8N2W9 510 aaPredicted RBP17.61■□□□□ 0.41
SNHG4-207ENST00000513259 BAZ1BQ9UIG0 1483 aaKnown RBP17.55■□□□□ 0.4
SNHG4-207ENST00000513259 BAZ1AQ9NRL2 1556 aaPredicted RBP17.52■□□□□ 0.39
SNHG4-207ENST00000513259 MSH5O43196 834 aa17.51■□□□□ 0.39
SNHG4-207ENST00000513259 THOC2Q8NI27 1593 aaKnown RBP17.5■□□□□ 0.39
SNHG4-207ENST00000513259 PEG3Q9GZU2 1588 aa17.46■□□□□ 0.39
SNHG4-207ENST00000513259 LAMC3Q9Y6N6 1575 aa17.45■□□□□ 0.38
SNHG4-207ENST00000513259 KIF21AQ7Z4S6 1674 aa17.42■□□□□ 0.38
SNHG4-207ENST00000513259 MROH2BQ7Z745 1585 aa17.42■□□□□ 0.38
SNHG4-207ENST00000513259 PDS5BQ9NTI5 1447 aa17.37■□□□□ 0.37
SNHG4-207ENST00000513259 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
SNHG4-207ENST00000513259 CADPSQ9ULU8 1353 aa17.28■□□□□ 0.36
SNHG4-207ENST00000513259 MRC2Q9UBG0 1479 aa17.24■□□□□ 0.35
SNHG4-207ENST00000513259 WIZO95785 1651 aa17.2■□□□□ 0.34
SNHG4-207ENST00000513259 WDR62O43379 1518 aa17.2■□□□□ 0.34
SNHG4-207ENST00000513259 CEP164Q9UPV0 1460 aa17.12■□□□□ 0.33
SNHG4-207ENST00000513259 FANCD2Q9BXW9 1451 aa17.09■□□□□ 0.33
SNHG4-207ENST00000513259 OSCARQ8IYS5 282 aa17.04■□□□□ 0.32
SNHG4-207ENST00000513259 CFTRP13569 1480 aa17.02■□□□□ 0.32
SNHG4-207ENST00000513259 URB2Q14146 1524 aaKnown RBP16.98■□□□□ 0.31
SNHG4-207ENST00000513259 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.3
SNHG4-207ENST00000513259 TOP2AP11388 1531 aaKnown RBP16.92■□□□□ 0.3
SNHG4-207ENST00000513259 RIMBP3CA6NJZ7 1639 aa16.85■□□□□ 0.29
SNHG4-207ENST00000513259 RIMBP3BA6NNM3 1639 aa16.85■□□□□ 0.29
SNHG4-207ENST00000513259 RIMBP3Q9UFD9 1639 aa16.85■□□□□ 0.29
SNHG4-207ENST00000513259 PRDM2Q13029 1718 aa16.83■□□□□ 0.28
SNHG4-207ENST00000513259 ZNF608Q9ULD9 1512 aaPredicted RBP16.82■□□□□ 0.28
SNHG4-207ENST00000513259 IFT140Q96RY7 1462 aa16.79■□□□□ 0.28
SNHG4-207ENST00000513259 CCDC88BA6NC98 1476 aa16.77■□□□□ 0.28
SNHG4-207ENST00000513259 ARHGEF11O15085 1522 aa16.74■□□□□ 0.27
SNHG4-207ENST00000513259 TOPBP1Q92547 1522 aa16.74■□□□□ 0.27
SNHG4-207ENST00000513259 CYB5RLQ6IPT4 315 aa16.69■□□□□ 0.26
SNHG4-207ENST00000513259 EIF4G3O43432 1585 aaKnown RBP16.68■□□□□ 0.26
SNHG4-207ENST00000513259 ABCC8Q09428 1581 aa16.66■□□□□ 0.26
SNHG4-207ENST00000513259 DNMBPQ6XZF7 1577 aa16.64■□□□□ 0.25
SNHG4-207ENST00000513259 AQRO60306 1485 aaKnown RBP eCLIP16.64■□□□□ 0.254e-10■■■■■ 32.5
SNHG4-207ENST00000513259 CHD1O14646 1710 aa16.64■□□□□ 0.25
SNHG4-207ENST00000513259 TARBP1Q13395 1621 aaKnown RBP16.62■□□□□ 0.25
SNHG4-207ENST00000513259 FBLN2P98095 1184 aa16.6■□□□□ 0.25
SNHG4-207ENST00000513259 TRHP20396 242 aaPredicted RBP16.57■□□□□ 0.24
SNHG4-207ENST00000513259 ARAP1Q96P48 1450 aa16.56■□□□□ 0.24
SNHG4-207ENST00000513259 POLA1P09884 1462 aaPredicted RBP16.54■□□□□ 0.24
SNHG4-207ENST00000513259 RAD54L2Q9Y4B4 1467 aa16.53■□□□□ 0.24
SNHG4-207ENST00000513259 TDRD9Q8NDG6 1382 aaKnown RBP16.51■□□□□ 0.23
SNHG4-207ENST00000513259 SOGA1O94964 1423 aa16.49■□□□□ 0.23
SNHG4-207ENST00000513259 POTEDQ86YR6 584 aa16.47■□□□□ 0.23
SNHG4-207ENST00000513259 SNAPC4Q5SXM2 1469 aa16.44■□□□□ 0.22
SNHG4-207ENST00000513259 CHMP7Q8WUX9 453 aaPredicted RBP16.42■□□□□ 0.22
SNHG4-207ENST00000513259 FGD5Q6ZNL6 1462 aa16.42■□□□□ 0.22
SNHG4-207ENST00000513259 CLASP1Q7Z460 1538 aa16.41■□□□□ 0.22
SNHG4-207ENST00000513259 WDR97A6NE52 1622 aa16.37■□□□□ 0.21
SNHG4-207ENST00000513259 CUX1P39880 1505 aa16.37■□□□□ 0.21
SNHG4-207ENST00000513259 SYNJ1O43426 1573 aa16.37■□□□□ 0.21
SNHG4-207ENST00000513259 MAGI1Q96QZ7 1491 aaPredicted RBP16.35■□□□□ 0.21
SNHG4-207ENST00000513259 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
SNHG4-207ENST00000513259 SYNJ2O15056 1496 aa16.32■□□□□ 0.2
SNHG4-207ENST00000513259 SCAF1Q9H7N4 1312 aaKnown RBP16.31■□□□□ 0.2
SNHG4-207ENST00000513259 PBRM1Q86U86 1689 aa16.28■□□□□ 0.2
SNHG4-207ENST00000513259 GAPVD1Q14C86 1478 aa16.27■□□□□ 0.19
SNHG4-207ENST00000513259 ABCA5Q8WWZ7 1642 aa16.2■□□□□ 0.18
SNHG4-207ENST00000513259 ABCA10Q8WWZ4 1543 aa16.19■□□□□ 0.18
SNHG4-207ENST00000513259 ERCC6L2Q5T890 1561 aa16.18■□□□□ 0.18
SNHG4-207ENST00000513259 GRIN2AQ12879 1464 aa16.14■□□□□ 0.17
SNHG4-207ENST00000513259 CEP170Q5SW79 1584 aa16.11■□□□□ 0.17
SNHG4-207ENST00000513259 ADAMTS12P58397 1594 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms