RNA–Protein interactions for RNA: ENST00000622409.4

AP4S1-212, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene AP4S1, Length 4,113 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-212ENST00000622409 NISCHQ9Y2I1 1504 aa14.12□□□□□ -0.15
AP4S1-212ENST00000622409 CCDC180Q9P1Z9 1646 aa12.75□□□□□ -0.37
AP4S1-212ENST00000622409 ABCC9O60706 1549 aa12.32□□□□□ -0.44
AP4S1-212ENST00000622409 RB1CC1Q8TDY2 1594 aa12□□□□□ -0.49
AP4S1-212ENST00000622409 NACADO15069 1562 aa11.99□□□□□ -0.49
AP4S1-212ENST00000622409 MYO15BQ96JP2 1530 aa11.96□□□□□ -0.49
AP4S1-212ENST00000622409 DCAF1Q9Y4B6 1507 aa11.83□□□□□ -0.52
AP4S1-212ENST00000622409 ZCCHC6Q5VYS8 1495 aaKnown RBP11.76□□□□□ -0.53
AP4S1-212ENST00000622409 SHROOM4Q9ULL8 1493 aa11.68□□□□□ -0.54
AP4S1-212ENST00000622409 DCAF8L2P0C7V8 631 aa11.61□□□□□ -0.55
AP4S1-212ENST00000622409 UNC13AQ9UPW8 1703 aa11.57□□□□□ -0.56
AP4S1-212ENST00000622409 BICRAQ9NZM4 1560 aa11.51□□□□□ -0.57
AP4S1-212ENST00000622409 PABPN1Q86U42 306 aaKnown RBP eCLIP11.4□□□□□ -0.58
AP4S1-212ENST00000622409 SCRIBQ14160 1630 aa11.4□□□□□ -0.59
AP4S1-212ENST00000622409 DNAJC5BQ9UF47 199 aa11.27□□□□□ -0.6
AP4S1-212ENST00000622409 EIF4G1Q04637 1599 aaKnown RBP11.25□□□□□ -0.61
AP4S1-212ENST00000622409 CC2D2AQ9P2K1 1620 aa11.2□□□□□ -0.62
AP4S1-212ENST00000622409 CECR2Q9BXF3 1484 aa11.16□□□□□ -0.62
AP4S1-212ENST00000622409 SMARCA2P51531 1590 aa11.02□□□□□ -0.64
AP4S1-212ENST00000622409 NCAPD3P42695 1498 aa11.01□□□□□ -0.65
AP4S1-212ENST00000622409 BAZ1AQ9NRL2 1556 aaPredicted RBP11.01□□□□□ -0.65
AP4S1-212ENST00000622409 HMGXB3Q12766 1538 aa10.99□□□□□ -0.65
AP4S1-212ENST00000622409 SMARCA4P51532 1647 aa10.98□□□□□ -0.65
AP4S1-212ENST00000622409 PEG3Q9GZU2 1588 aa10.96□□□□□ -0.66
AP4S1-212ENST00000622409 ATAD2BQ9ULI0 1458 aa10.94□□□□□ -0.66
AP4S1-212ENST00000622409 BAZ1BQ9UIG0 1483 aaKnown RBP10.86□□□□□ -0.67
AP4S1-212ENST00000622409 MROH2BQ7Z745 1585 aa10.79□□□□□ -0.68
AP4S1-212ENST00000622409 CUX2O14529 1486 aa10.77□□□□□ -0.68
AP4S1-212ENST00000622409 LAMC3Q9Y6N6 1575 aa10.77□□□□□ -0.69
AP4S1-212ENST00000622409 ERCC6Q03468 1493 aa10.72□□□□□ -0.69
AP4S1-212ENST00000622409 PDS5BQ9NTI5 1447 aa10.69□□□□□ -0.7
AP4S1-212ENST00000622409 TOP2AP11388 1531 aaKnown RBP10.68□□□□□ -0.7
AP4S1-212ENST00000622409 RSF1Q96T23 1441 aaPredicted RBP10.66□□□□□ -0.7
AP4S1-212ENST00000622409 WIZO95785 1651 aa10.65□□□□□ -0.71
AP4S1-212ENST00000622409 CADPSQ9ULU8 1353 aa10.64□□□□□ -0.71
AP4S1-212ENST00000622409 THOC2Q8NI27 1593 aaKnown RBP10.59□□□□□ -0.71
AP4S1-212ENST00000622409 NESP48681 1621 aa10.58□□□□□ -0.72
AP4S1-212ENST00000622409 MRC2Q9UBG0 1479 aa10.57□□□□□ -0.72
AP4S1-212ENST00000622409 CFTRP13569 1480 aa10.56□□□□□ -0.72
AP4S1-212ENST00000622409 PRDM2Q13029 1718 aa10.55□□□□□ -0.72
AP4S1-212ENST00000622409 CEP164Q9UPV0 1460 aa10.54□□□□□ -0.72
AP4S1-212ENST00000622409 KIF21AQ7Z4S6 1674 aa10.54□□□□□ -0.72
AP4S1-212ENST00000622409 WDR62O43379 1518 aa10.53□□□□□ -0.72
AP4S1-212ENST00000622409 FANCD2Q9BXW9 1451 aa10.5□□□□□ -0.73
AP4S1-212ENST00000622409 ABCC8Q09428 1581 aa10.47□□□□□ -0.73
AP4S1-212ENST00000622409 CCDC88BA6NC98 1476 aa10.45□□□□□ -0.74
AP4S1-212ENST00000622409 DNAJC5Q9H3Z4 198 aa10.43□□□□□ -0.74
AP4S1-212ENST00000622409 IFT140Q96RY7 1462 aa10.36□□□□□ -0.75
AP4S1-212ENST00000622409 URB2Q14146 1524 aaKnown RBP10.36□□□□□ -0.75
AP4S1-212ENST00000622409 DNMBPQ6XZF7 1577 aa10.36□□□□□ -0.75
AP4S1-212ENST00000622409 WDR97A6NE52 1622 aa10.35□□□□□ -0.75
AP4S1-212ENST00000622409 TOPBP1Q92547 1522 aa10.32□□□□□ -0.76
AP4S1-212ENST00000622409 TARBP1Q13395 1621 aaKnown RBP10.21□□□□□ -0.77
AP4S1-212ENST00000622409 POLA1P09884 1462 aaPredicted RBP10.2□□□□□ -0.78
AP4S1-212ENST00000622409 EIF4G3O43432 1585 aaKnown RBP10.19□□□□□ -0.78
AP4S1-212ENST00000622409 OSCARQ8IYS5 282 aa10.18□□□□□ -0.78
AP4S1-212ENST00000622409 SOGA1O94964 1423 aa10.17□□□□□ -0.78
AP4S1-212ENST00000622409 FGD5Q6ZNL6 1462 aa10.16□□□□□ -0.78
AP4S1-212ENST00000622409 CUX1P39880 1505 aa10.16□□□□□ -0.78
AP4S1-212ENST00000622409 MAGI1Q96QZ7 1491 aaPredicted RBP10.14□□□□□ -0.79
AP4S1-212ENST00000622409 CHIC1Q5VXU3 224 aa10.14□□□□□ -0.79
AP4S1-212ENST00000622409 ZNF608Q9ULD9 1512 aaPredicted RBP10.14□□□□□ -0.79
AP4S1-212ENST00000622409 BIVM-ERCC5R4GMW8 1640 aa10.13□□□□□ -0.79
AP4S1-212ENST00000622409 SUPT5HO00267 1087 aaKnown RBP10.13□□□□□ -0.79
AP4S1-212ENST00000622409 GRIN2BQ13224 1484 aa10.13□□□□□ -0.79
AP4S1-212ENST00000622409 ABCA10Q8WWZ4 1543 aa10.12□□□□□ -0.79
AP4S1-212ENST00000622409 TOP2BQ02880 1626 aa10.11□□□□□ -0.79
AP4S1-212ENST00000622409 WRNQ14191 1432 aaPredicted RBP eCLIP10.11□□□□□ -0.79
AP4S1-212ENST00000622409 RAD54L2Q9Y4B4 1467 aa10.08□□□□□ -0.8
AP4S1-212ENST00000622409 ABCA5Q8WWZ7 1642 aa10.08□□□□□ -0.8
AP4S1-212ENST00000622409 SYNJ1O43426 1573 aa10.08□□□□□ -0.8
AP4S1-212ENST00000622409 AQRO60306 1485 aaKnown RBP eCLIP10.07□□□□□ -0.8
AP4S1-212ENST00000622409 SYNJ2O15056 1496 aa10.07□□□□□ -0.8
AP4S1-212ENST00000622409 GAPVD1Q14C86 1478 aa10.07□□□□□ -0.8
AP4S1-212ENST00000622409 CHD1O14646 1710 aa10.06□□□□□ -0.8
AP4S1-212ENST00000622409 PBRM1Q86U86 1689 aa10.06□□□□□ -0.8
AP4S1-212ENST00000622409 SNAPC4Q5SXM2 1469 aa10.05□□□□□ -0.8
AP4S1-212ENST00000622409 ERICH3Q5RHP9 1530 aa10.03□□□□□ -0.8
AP4S1-212ENST00000622409 TDRD9Q8NDG6 1382 aaKnown RBP10.03□□□□□ -0.8
AP4S1-212ENST00000622409 CLASP1Q7Z460 1538 aa10.02□□□□□ -0.81
AP4S1-212ENST00000622409 RIMBP3CA6NJZ7 1639 aa10.01□□□□□ -0.81
AP4S1-212ENST00000622409 RIMBP3BA6NNM3 1639 aa10.01□□□□□ -0.81
AP4S1-212ENST00000622409 RIMBP3Q9UFD9 1639 aa10.01□□□□□ -0.81
AP4S1-212ENST00000622409 ARHGEF11O15085 1522 aa10□□□□□ -0.81
AP4S1-212ENST00000622409 ADAMTS12P58397 1594 aa10□□□□□ -0.81
AP4S1-212ENST00000622409 FHAD1B1AJZ9 1412 aa10□□□□□ -0.81
AP4S1-212ENST00000622409 CHMP7Q8WUX9 453 aaPredicted RBP10□□□□□ -0.81
AP4S1-212ENST00000622409 GRIN2AQ12879 1464 aa9.96□□□□□ -0.81
AP4S1-212ENST00000622409 NUP160Q12769 1436 aa9.95□□□□□ -0.82
AP4S1-212ENST00000622409 CUL7Q14999 1698 aa9.94□□□□□ -0.82
AP4S1-212ENST00000622409 KIF27Q86VH2 1401 aa9.94□□□□□ -0.82
AP4S1-212ENST00000622409 FBLN2P98095 1184 aa9.94□□□□□ -0.82
AP4S1-212ENST00000622409 TRIM41Q8WV44 630 aa9.9□□□□□ -0.82
AP4S1-212ENST00000622409 ARAP1Q96P48 1450 aa9.9□□□□□ -0.82
AP4S1-212ENST00000622409 SHROOM2Q13796 1616 aa9.9□□□□□ -0.83
AP4S1-212ENST00000622409 CEP170Q5SW79 1584 aa9.86□□□□□ -0.83
AP4S1-212ENST00000622409 KIAA0586Q9BVV6 1533 aa9.84□□□□□ -0.83
AP4S1-212ENST00000622409 RUSC2Q8N2Y8 1516 aa9.83□□□□□ -0.84
AP4S1-212ENST00000622409 IGF1RP08069 1367 aa9.82□□□□□ -0.84
AP4S1-212ENST00000622409 CYB5RLQ6IPT4 315 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms