RNA–Protein interactions for RNA: ENST00000334725.8

AP4S1-203, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

TSL 1 (best) BASIC

Gene AP4S1, Length 1,122 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-203ENST00000334725 NISCHQ9Y2I1 1504 aa29.42■■■□□ 2.3
AP4S1-203ENST00000334725 CCDC180Q9P1Z9 1646 aa26.14■■□□□ 1.77
AP4S1-203ENST00000334725 ABCC9O60706 1549 aa25.71■■□□□ 1.71
AP4S1-203ENST00000334725 RB1CC1Q8TDY2 1594 aa24.64■■□□□ 1.54
AP4S1-203ENST00000334725 NACADO15069 1562 aa24.61■■□□□ 1.53
AP4S1-203ENST00000334725 DCAF8L2P0C7V8 631 aa24.58■■□□□ 1.53
AP4S1-203ENST00000334725 ZCCHC6Q5VYS8 1495 aaKnown RBP24.5■■□□□ 1.51
AP4S1-203ENST00000334725 MYO15BQ96JP2 1530 aa24.45■■□□□ 1.51
AP4S1-203ENST00000334725 DCAF1Q9Y4B6 1507 aa24.32■■□□□ 1.48
AP4S1-203ENST00000334725 UNC13AQ9UPW8 1703 aa24.13■■□□□ 1.45
AP4S1-203ENST00000334725 PABPN1Q86U42 306 aaKnown RBP eCLIP24.04■■□□□ 1.44
AP4S1-203ENST00000334725 BICRAQ9NZM4 1560 aa23.99■■□□□ 1.43
AP4S1-203ENST00000334725 SCRIBQ14160 1630 aa23.88■■□□□ 1.41
AP4S1-203ENST00000334725 DNAJC5BQ9UF47 199 aa23.77■■□□□ 1.4
AP4S1-203ENST00000334725 SHROOM4Q9ULL8 1493 aa23.62■■□□□ 1.37
AP4S1-203ENST00000334725 EIF4G1Q04637 1599 aaKnown RBP23.31■■□□□ 1.32
AP4S1-203ENST00000334725 CC2D2AQ9P2K1 1620 aa23.24■■□□□ 1.31
AP4S1-203ENST00000334725 CECR2Q9BXF3 1484 aa23.1■■□□□ 1.29
AP4S1-203ENST00000334725 SMARCA4P51532 1647 aa22.83■■□□□ 1.25
AP4S1-203ENST00000334725 BAZ1AQ9NRL2 1556 aaPredicted RBP22.77■■□□□ 1.24
AP4S1-203ENST00000334725 ATAD2BQ9ULI0 1458 aa22.76■■□□□ 1.23
AP4S1-203ENST00000334725 NCAPD3P42695 1498 aa22.75■■□□□ 1.23
AP4S1-203ENST00000334725 MROH2BQ7Z745 1585 aa22.7■■□□□ 1.22
AP4S1-203ENST00000334725 SMARCA2P51531 1590 aa22.66■■□□□ 1.22
AP4S1-203ENST00000334725 PEG3Q9GZU2 1588 aa22.63■■□□□ 1.21
AP4S1-203ENST00000334725 HMGXB3Q12766 1538 aa22.6■■□□□ 1.21
AP4S1-203ENST00000334725 BAZ1BQ9UIG0 1483 aaKnown RBP22.52■■□□□ 1.2
AP4S1-203ENST00000334725 WIZO95785 1651 aa22.43■■□□□ 1.18
AP4S1-203ENST00000334725 RSF1Q96T23 1441 aaPredicted RBP22.41■■□□□ 1.18
AP4S1-203ENST00000334725 NESP48681 1621 aa22.26■■□□□ 1.15
AP4S1-203ENST00000334725 TOP2AP11388 1531 aaKnown RBP22.16■■□□□ 1.14
AP4S1-203ENST00000334725 LAMC3Q9Y6N6 1575 aa22.12■■□□□ 1.13
AP4S1-203ENST00000334725 ERCC6Q03468 1493 aa22.1■■□□□ 1.13
AP4S1-203ENST00000334725 CADPSQ9ULU8 1353 aa22.07■■□□□ 1.12
AP4S1-203ENST00000334725 PDS5BQ9NTI5 1447 aa21.97■■□□□ 1.11
AP4S1-203ENST00000334725 CCDC88BA6NC98 1476 aa21.94■■□□□ 1.1
AP4S1-203ENST00000334725 KIF21AQ7Z4S6 1674 aa21.94■■□□□ 1.1
AP4S1-203ENST00000334725 CFTRP13569 1480 aa21.93■■□□□ 1.1
AP4S1-203ENST00000334725 CUX2O14529 1486 aa21.92■■□□□ 1.1
AP4S1-203ENST00000334725 THOC2Q8NI27 1593 aaKnown RBP21.91■■□□□ 1.1
AP4S1-203ENST00000334725 FANCD2Q9BXW9 1451 aa21.81■■□□□ 1.08
AP4S1-203ENST00000334725 MRC2Q9UBG0 1479 aa21.76■■□□□ 1.07
AP4S1-203ENST00000334725 CEP164Q9UPV0 1460 aa21.76■■□□□ 1.07
AP4S1-203ENST00000334725 SUPT5HO00267 1087 aaKnown RBP21.74■■□□□ 1.07
AP4S1-203ENST00000334725 WDR62O43379 1518 aa21.7■■□□□ 1.07
AP4S1-203ENST00000334725 PRDM2Q13029 1718 aa21.68■■□□□ 1.06
AP4S1-203ENST00000334725 URB2Q14146 1524 aaKnown RBP21.64■■□□□ 1.05
AP4S1-203ENST00000334725 TOPBP1Q92547 1522 aa21.46■■□□□ 1.03
AP4S1-203ENST00000334725 DNMBPQ6XZF7 1577 aa21.4■■□□□ 1.02
AP4S1-203ENST00000334725 DNAJC5Q9H3Z4 198 aa21.4■■□□□ 1.02
AP4S1-203ENST00000334725 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
AP4S1-203ENST00000334725 IFT140Q96RY7 1462 aa21.32■■□□□ 1
AP4S1-203ENST00000334725 CUX1P39880 1505 aa21.29■■□□□ 1
AP4S1-203ENST00000334725 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
AP4S1-203ENST00000334725 POLA1P09884 1462 aaPredicted RBP21.28■■□□□ 1
AP4S1-203ENST00000334725 TARBP1Q13395 1621 aaKnown RBP21.26■□□□□ 0.99
AP4S1-203ENST00000334725 RAD54L2Q9Y4B4 1467 aa21.21■□□□□ 0.99
AP4S1-203ENST00000334725 FGD5Q6ZNL6 1462 aa21.2■□□□□ 0.98
AP4S1-203ENST00000334725 SOGA1O94964 1423 aa21.18■□□□□ 0.98
AP4S1-203ENST00000334725 EIF4G3O43432 1585 aaKnown RBP21.15■□□□□ 0.98
AP4S1-203ENST00000334725 AQRO60306 1485 aaKnown RBP eCLIP21.15■□□□□ 0.98
AP4S1-203ENST00000334725 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
AP4S1-203ENST00000334725 WRNQ14191 1432 aaPredicted RBP eCLIP21.09■□□□□ 0.97
AP4S1-203ENST00000334725 SYNJ1O43426 1573 aa21.07■□□□□ 0.96
AP4S1-203ENST00000334725 TOP2BQ02880 1626 aa21.05■□□□□ 0.96
AP4S1-203ENST00000334725 BIVM-ERCC5R4GMW8 1640 aa21.05■□□□□ 0.96
AP4S1-203ENST00000334725 WDR97A6NE52 1622 aa21.04■□□□□ 0.96
AP4S1-203ENST00000334725 OSCARQ8IYS5 282 aa21.01■□□□□ 0.95
AP4S1-203ENST00000334725 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
AP4S1-203ENST00000334725 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
AP4S1-203ENST00000334725 GRIN2BQ13224 1484 aa20.92■□□□□ 0.94
AP4S1-203ENST00000334725 GAPVD1Q14C86 1478 aa20.92■□□□□ 0.94
AP4S1-203ENST00000334725 SNAPC4Q5SXM2 1469 aa20.92■□□□□ 0.94
AP4S1-203ENST00000334725 CHD1O14646 1710 aa20.89■□□□□ 0.93
AP4S1-203ENST00000334725 MAGI1Q96QZ7 1491 aaPredicted RBP20.87■□□□□ 0.93
AP4S1-203ENST00000334725 PBRM1Q86U86 1689 aa20.86■□□□□ 0.93
AP4S1-203ENST00000334725 FBLN2P98095 1184 aa20.85■□□□□ 0.93
AP4S1-203ENST00000334725 SYNJ2O15056 1496 aa20.8■□□□□ 0.92
AP4S1-203ENST00000334725 CHMP7Q8WUX9 453 aaPredicted RBP20.78■□□□□ 0.92
AP4S1-203ENST00000334725 ERICH3Q5RHP9 1530 aa20.73■□□□□ 0.91
AP4S1-203ENST00000334725 ADAMTS12P58397 1594 aa20.72■□□□□ 0.91
AP4S1-203ENST00000334725 CLASP1Q7Z460 1538 aa20.7■□□□□ 0.9
AP4S1-203ENST00000334725 RIMBP3CA6NJZ7 1639 aa20.7■□□□□ 0.9
AP4S1-203ENST00000334725 RIMBP3BA6NNM3 1639 aa20.7■□□□□ 0.9
AP4S1-203ENST00000334725 RIMBP3Q9UFD9 1639 aa20.7■□□□□ 0.9
AP4S1-203ENST00000334725 ARHGEF11O15085 1522 aa20.68■□□□□ 0.9
AP4S1-203ENST00000334725 FHAD1B1AJZ9 1412 aa20.68■□□□□ 0.9
AP4S1-203ENST00000334725 GRIN2AQ12879 1464 aa20.67■□□□□ 0.9
AP4S1-203ENST00000334725 KIF27Q86VH2 1401 aa20.63■□□□□ 0.89
AP4S1-203ENST00000334725 IGF1RP08069 1367 aa20.63■□□□□ 0.89
AP4S1-203ENST00000334725 TRIM41Q8WV44 630 aa20.62■□□□□ 0.89
AP4S1-203ENST00000334725 NUP160Q12769 1436 aa20.6■□□□□ 0.89
AP4S1-203ENST00000334725 CEP170Q5SW79 1584 aa20.59■□□□□ 0.89
AP4S1-203ENST00000334725 ARAP1Q96P48 1450 aa20.54■□□□□ 0.88
AP4S1-203ENST00000334725 RUSC2Q8N2Y8 1516 aa20.52■□□□□ 0.87
AP4S1-203ENST00000334725 CYB5RLQ6IPT4 315 aa20.5■□□□□ 0.87
AP4S1-203ENST00000334725 CUL7Q14999 1698 aa20.48■□□□□ 0.87
AP4S1-203ENST00000334725 CARMIL1Q5VZK9 1371 aa20.46■□□□□ 0.87
AP4S1-203ENST00000334725 ERCC6L2Q5T890 1561 aa20.45■□□□□ 0.86
AP4S1-203ENST00000334725 SHROOM2Q13796 1616 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms