RNA–Protein interactions for RNA: ENST00000423041.6

PAPD4-202, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAPD4, Length 3,223 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-202ENST00000423041 NISCHQ9Y2I1 1504 aa18.04■□□□□ 0.48
PAPD4-202ENST00000423041 PELP1Q8IZL8 1130 aaKnown RBP16.57■□□□□ 0.24
PAPD4-202ENST00000423041 MYT1Q01538 1121 aa16.21■□□□□ 0.19
PAPD4-202ENST00000423041 HRCP23327 699 aa15.82■□□□□ 0.12
PAPD4-202ENST00000423041 CCDC180Q9P1Z9 1646 aa15.65■□□□□ 0.1
PAPD4-202ENST00000423041 DCAF8L2P0C7V8 631 aa15.58■□□□□ 0.09
PAPD4-202ENST00000423041 ABCC9O60706 1549 aa15.44■□□□□ 0.06
PAPD4-202ENST00000423041 TTBK1Q5TCY1 1321 aaPredicted RBP15.44■□□□□ 0.06
PAPD4-202ENST00000423041 PPARGC1BQ86YN6 1023 aaKnown RBP15.44■□□□□ 0.06
PAPD4-202ENST00000423041 SCAF1Q9H7N4 1312 aaKnown RBP15.4■□□□□ 0.06
PAPD4-202ENST00000423041 PCGF6Q9BYE7 350 aa15.12■□□□□ 0.01
PAPD4-202ENST00000423041 ZCCHC6Q5VYS8 1495 aaKnown RBP15.05■□□□□ 0
PAPD4-202ENST00000423041 PRKCSHP14314 528 aaPredicted RBP15.03■□□□□ -0
PAPD4-202ENST00000423041 SHROOM4Q9ULL8 1493 aa15□□□□□ -0.01
PAPD4-202ENST00000423041 BCL11AQ9H165 835 aa14.98□□□□□ -0.01
PAPD4-202ENST00000423041 ACIN1Q9UKV3 1341 aaKnown RBP14.81□□□□□ -0.04
PAPD4-202ENST00000423041 FAM9AQ8IZU1 332 aaPredicted RBP14.81□□□□□ -0.04
PAPD4-202ENST00000423041 CENPBP07199 599 aaPredicted RBP14.78□□□□□ -0.04
PAPD4-202ENST00000423041 ERICH6Q7L0X2 663 aa14.75□□□□□ -0.05
PAPD4-202ENST00000423041 GTF3C3Q9Y5Q9 886 aa14.75□□□□□ -0.05
PAPD4-202ENST00000423041 NACADO15069 1562 aa14.74□□□□□ -0.05
PAPD4-202ENST00000423041 RB1CC1Q8TDY2 1594 aa14.73□□□□□ -0.05
PAPD4-202ENST00000423041 DCAF1Q9Y4B6 1507 aa14.73□□□□□ -0.05
PAPD4-202ENST00000423041 NEUROD1Q13562 356 aa14.71□□□□□ -0.06
PAPD4-202ENST00000423041 SCRIBQ14160 1630 aa14.66□□□□□ -0.06
PAPD4-202ENST00000423041 PABPN1Q86U42 306 aaKnown RBP eCLIP14.65□□□□□ -0.06
PAPD4-202ENST00000423041 ZEB1P37275 1124 aaPredicted RBP14.63□□□□□ -0.07
PAPD4-202ENST00000423041 MYO15BQ96JP2 1530 aa14.61□□□□□ -0.07
PAPD4-202ENST00000423041 APLP2Q06481 763 aa14.56□□□□□ -0.08
PAPD4-202ENST00000423041 ANP32EQ9BTT0 268 aa14.44□□□□□ -0.1
PAPD4-202ENST00000423041 TRIM26Q12899 539 aaPredicted RBP14.41□□□□□ -0.1
PAPD4-202ENST00000423041 SUPT5HO00267 1087 aaKnown RBP14.36□□□□□ -0.11
PAPD4-202ENST00000423041 UNC13AQ9UPW8 1703 aa14.31□□□□□ -0.12
PAPD4-202ENST00000423041 CSRNP3Q8WYN3 585 aa14.29□□□□□ -0.12
PAPD4-202ENST00000423041 BICRAQ9NZM4 1560 aa14.23□□□□□ -0.13
PAPD4-202ENST00000423041 CHIC1Q5VXU3 224 aa14.17□□□□□ -0.14
PAPD4-202ENST00000423041 CECR2Q9BXF3 1484 aa14.16□□□□□ -0.14
PAPD4-202ENST00000423041 DIEXFQ68CQ4 756 aaKnown RBP14.13□□□□□ -0.15
PAPD4-202ENST00000423041 SLC24A1O60721 1099 aa14.02□□□□□ -0.17
PAPD4-202ENST00000423041 YTHDC1Q96MU7 727 aaKnown RBP14.02□□□□□ -0.17
PAPD4-202ENST00000423041 MROH2BQ7Z745 1585 aa13.99□□□□□ -0.17
PAPD4-202ENST00000423041 RSF1Q96T23 1441 aaPredicted RBP13.98□□□□□ -0.17
PAPD4-202ENST00000423041 TSHZ2Q9NRE2 1034 aa13.97□□□□□ -0.17
PAPD4-202ENST00000423041 LOC105371045A0A1W2PR82 267 aa13.96□□□□□ -0.18
PAPD4-202ENST00000423041 ANO8Q9HCE9 1232 aaPredicted RBP13.96□□□□□ -0.18
PAPD4-202ENST00000423041 BAZ1AQ9NRL2 1556 aaPredicted RBP13.95□□□□□ -0.18
PAPD4-202ENST00000423041 EIF4G1Q04637 1599 aaKnown RBP13.91□□□□□ -0.18
PAPD4-202ENST00000423041 SMARCA4P51532 1647 aa13.89□□□□□ -0.19
PAPD4-202ENST00000423041 DNAJC5BQ9UF47 199 aa13.86□□□□□ -0.19
PAPD4-202ENST00000423041 WIZO95785 1651 aa13.86□□□□□ -0.19
PAPD4-202ENST00000423041 EIF5BO60841 1220 aaKnown RBP13.81□□□□□ -0.2
PAPD4-202ENST00000423041 SUPT16HQ9Y5B9 1047 aaKnown RBP13.81□□□□□ -0.2
PAPD4-202ENST00000423041 UBE2Q2Q8WVN8 375 aa13.8□□□□□ -0.2
PAPD4-202ENST00000423041 ATAD2BQ9ULI0 1458 aa13.79□□□□□ -0.2
PAPD4-202ENST00000423041 CLSPNQ9HAW4 1339 aa13.79□□□□□ -0.2
PAPD4-202ENST00000423041 CC2D2AQ9P2K1 1620 aa13.79□□□□□ -0.2
PAPD4-202ENST00000423041 BAZ1BQ9UIG0 1483 aaKnown RBP13.77□□□□□ -0.21
PAPD4-202ENST00000423041 CCER1Q8TC90 406 aaPredicted RBP13.76□□□□□ -0.21
PAPD4-202ENST00000423041 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
PAPD4-202ENST00000423041 SMARCA2P51531 1590 aa13.73□□□□□ -0.21
PAPD4-202ENST00000423041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.71□□□□□ -0.21
PAPD4-202ENST00000423041 SALL2Q9Y467 1007 aaPredicted RBP13.69□□□□□ -0.22
PAPD4-202ENST00000423041 MIER1Q8N108 512 aa13.66□□□□□ -0.22
PAPD4-202ENST00000423041 NCAPD3P42695 1498 aa13.66□□□□□ -0.22
PAPD4-202ENST00000423041 CCDC136Q96JN2 1154 aa13.66□□□□□ -0.22
PAPD4-202ENST00000423041 ZNF316A6NFI3 1004 aaPredicted RBP13.65□□□□□ -0.22
PAPD4-202ENST00000423041 DAXXQ9UER7 740 aaPredicted RBP13.65□□□□□ -0.22
PAPD4-202ENST00000423041 TOP2AP11388 1531 aaKnown RBP13.62□□□□□ -0.23
PAPD4-202ENST00000423041 MYT1LQ9UL68 1186 aa13.61□□□□□ -0.23
PAPD4-202ENST00000423041 PEG3Q9GZU2 1588 aa13.59□□□□□ -0.23
PAPD4-202ENST00000423041 CCDC88BA6NC98 1476 aa13.59□□□□□ -0.23
PAPD4-202ENST00000423041 RBM19Q9Y4C8 960 aaKnown RBP13.58□□□□□ -0.23
PAPD4-202ENST00000423041 DEKP35659 375 aaKnown RBP13.58□□□□□ -0.24
PAPD4-202ENST00000423041 ERICH6BQ5W0A0 696 aa13.58□□□□□ -0.24
PAPD4-202ENST00000423041 HMGXB3Q12766 1538 aa13.55□□□□□ -0.24
PAPD4-202ENST00000423041 PKNOX2Q96KN3 472 aa13.51□□□□□ -0.25
PAPD4-202ENST00000423041 MSH5O43196 834 aa13.51□□□□□ -0.25
PAPD4-202ENST00000423041 PLEKHG5O94827 1062 aa13.51□□□□□ -0.25
PAPD4-202ENST00000423041 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.47□□□□□ -0.25
PAPD4-202ENST00000423041 BCANQ96GW7 911 aa13.45□□□□□ -0.26
PAPD4-202ENST00000423041 NESP48681 1621 aa13.43□□□□□ -0.26
PAPD4-202ENST00000423041 PODXL2Q9NZ53 605 aa13.42□□□□□ -0.26
PAPD4-202ENST00000423041 CADPSQ9ULU8 1353 aa13.4□□□□□ -0.26
PAPD4-202ENST00000423041 FANCIQ9NVI1 1328 aa13.33□□□□□ -0.27
PAPD4-202ENST00000423041 EHMT2Q96KQ7 1210 aa13.32□□□□□ -0.28
PAPD4-202ENST00000423041 RTN4Q9NQC3 1192 aaKnown RBP13.32□□□□□ -0.28
PAPD4-202ENST00000423041 CFTRP13569 1480 aa13.31□□□□□ -0.28
PAPD4-202ENST00000423041 FKBP8Q14318 412 aa13.3□□□□□ -0.28
PAPD4-202ENST00000423041 ABCC8Q09428 1581 aa13.29□□□□□ -0.28
PAPD4-202ENST00000423041 ERCC6Q03468 1493 aa13.29□□□□□ -0.28
PAPD4-202ENST00000423041 IL27Q8NEV9 243 aa13.28□□□□□ -0.28
PAPD4-202ENST00000423041 PDS5BQ9NTI5 1447 aa13.26□□□□□ -0.29
PAPD4-202ENST00000423041 FANCD2Q9BXW9 1451 aa13.26□□□□□ -0.29
PAPD4-202ENST00000423041 WRNQ14191 1432 aaPredicted RBP eCLIP13.23□□□□□ -0.29
PAPD4-202ENST00000423041 ITGAEP38570 1179 aa13.22□□□□□ -0.29
PAPD4-202ENST00000423041 NEFLP07196 543 aa13.21□□□□□ -0.29
PAPD4-202ENST00000423041 LAMC3Q9Y6N6 1575 aa13.21□□□□□ -0.3
PAPD4-202ENST00000423041 NBR1Q14596 966 aa13.2□□□□□ -0.3
PAPD4-202ENST00000423041 CEP164Q9UPV0 1460 aa13.2□□□□□ -0.3
PAPD4-202ENST00000423041 RTL5Q5HYW3 569 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms