RNA–Protein interactions for RNA: ENST00000367330.5

TMEM9-201, Transcript of transmembrane protein 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM9, Length 1,959 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM9-201ENST00000367330 NISCHQ9Y2I1 1504 aa54.52■■■■■ 6.32
TMEM9-201ENST00000367330 CCDC180Q9P1Z9 1646 aa46.88■■■■■ 5.1
TMEM9-201ENST00000367330 ZCCHC6Q5VYS8 1495 aaKnown RBP46.16■■■■■ 4.98
TMEM9-201ENST00000367330 SHROOM4Q9ULL8 1493 aa45.52■■■■■ 4.88
TMEM9-201ENST00000367330 DCAF1Q9Y4B6 1507 aa45.1■■■■■ 4.81
TMEM9-201ENST00000367330 SUPT5HO00267 1087 aaKnown RBP44.5■■■■■ 4.71
TMEM9-201ENST00000367330 DCAF8L2P0C7V8 631 aa44.31■■■■■ 4.68
TMEM9-201ENST00000367330 MYO15BQ96JP2 1530 aa43.96■■■■■ 4.63
TMEM9-201ENST00000367330 ABCC9O60706 1549 aa43.56■■■■■ 4.56
TMEM9-201ENST00000367330 CHIC1Q5VXU3 224 aa43.49■■■■■ 4.55
TMEM9-201ENST00000367330 SCRIBQ14160 1630 aa43.32■■■■■ 4.53
TMEM9-201ENST00000367330 NACADO15069 1562 aa43.21■■■■■ 4.51
TMEM9-201ENST00000367330 RSF1Q96T23 1441 aaPredicted RBP42.88■■■■■ 4.46
TMEM9-201ENST00000367330 RB1CC1Q8TDY2 1594 aa42.59■■■■■ 4.41
TMEM9-201ENST00000367330 CECR2Q9BXF3 1484 aa42.25■■■■■ 4.35
TMEM9-201ENST00000367330 MROH2BQ7Z745 1585 aa42.22■■■■■ 4.35
TMEM9-201ENST00000367330 WIZO95785 1651 aa42.01■■■■■ 4.31
TMEM9-201ENST00000367330 BAZ1AQ9NRL2 1556 aaPredicted RBP41.99■■■■■ 4.31
TMEM9-201ENST00000367330 UNC13AQ9UPW8 1703 aa41.89■■■■■ 4.3
TMEM9-201ENST00000367330 LOC105371045A0A1W2PR82 267 aa41.86■■■■■ 4.29
TMEM9-201ENST00000367330 HRCP23327 699 aa41.74■■■■■ 4.27
TMEM9-201ENST00000367330 TRIM41Q8WV44 630 aa41.7■■■■■ 4.27
TMEM9-201ENST00000367330 EIF4G1Q04637 1599 aaKnown RBP41.66■■■■■ 4.26
TMEM9-201ENST00000367330 SMARCA4P51532 1647 aa41.64■■■■■ 4.26
TMEM9-201ENST00000367330 PCGF6Q9BYE7 350 aa41.57■■■■■ 4.25
TMEM9-201ENST00000367330 TOP2AP11388 1531 aaKnown RBP41.56■■■■■ 4.24
TMEM9-201ENST00000367330 BICRAQ9NZM4 1560 aa41.27■■■■■ 4.2
TMEM9-201ENST00000367330 SMARCA2P51531 1590 aa41.25■■■■■ 4.19
TMEM9-201ENST00000367330 TRIM26Q12899 539 aaPredicted RBP41.19■■■■■ 4.18
TMEM9-201ENST00000367330 CCDC88BA6NC98 1476 aa41.13■■■■■ 4.17
TMEM9-201ENST00000367330 PEG3Q9GZU2 1588 aa41.06■■■■■ 4.16
TMEM9-201ENST00000367330 FAM9AQ8IZU1 332 aaPredicted RBP41.01■■■■■ 4.16
TMEM9-201ENST00000367330 ABCC8Q09428 1581 aa40.82■■■■■ 4.12
TMEM9-201ENST00000367330 PABPN1Q86U42 306 aaKnown RBP eCLIP40.65■■■■■ 4.1
TMEM9-201ENST00000367330 EEA1Q15075 1411 aa40.54■■■■■ 4.08
TMEM9-201ENST00000367330 ATAD2BQ9ULI0 1458 aa40.49■■■■■ 4.07
TMEM9-201ENST00000367330 PPARGC1BQ86YN6 1023 aaKnown RBP40.49■■■■■ 4.07
TMEM9-201ENST00000367330 ZEB1P37275 1124 aaPredicted RBP40.36■■■■■ 4.05
TMEM9-201ENST00000367330 EHMT2Q96KQ7 1210 aa40.36■■■■■ 4.05
TMEM9-201ENST00000367330 BAZ1BQ9UIG0 1483 aaKnown RBP40.34■■■■■ 4.05
TMEM9-201ENST00000367330 SOGA1O94964 1423 aa40.32■■■■■ 4.04
TMEM9-201ENST00000367330 WRNQ14191 1432 aaPredicted RBP eCLIP40.29■■■■■ 4.04
TMEM9-201ENST00000367330 TNIKQ9UKE5 1360 aa40.23■■■■■ 4.03
TMEM9-201ENST00000367330 SYNJ1O43426 1573 aa40.17■■■■■ 4.02
TMEM9-201ENST00000367330 CEP162Q5TB80 1403 aa40.14■■■■■ 4.02
TMEM9-201ENST00000367330 RUSC2Q8N2Y8 1516 aa40.11■■■■■ 4.01
TMEM9-201ENST00000367330 CSRNP3Q8WYN3 585 aa40.09■■■■■ 4.01
TMEM9-201ENST00000367330 GOLGA3Q08378 1498 aa40.07■■■■■ 4.01
TMEM9-201ENST00000367330 KIF21BO75037 1637 aa40.04■■■■■ 4
TMEM9-201ENST00000367330 HMGXB3Q12766 1538 aa39.99■■■■□ 3.99
TMEM9-201ENST00000367330 CEP164Q9UPV0 1460 aa39.9■■■■□ 3.98
TMEM9-201ENST00000367330 TOP2BQ02880 1626 aa39.87■■■■□ 3.97
TMEM9-201ENST00000367330 NCAPD3P42695 1498 aa39.85■■■■□ 3.97
TMEM9-201ENST00000367330 BIVM-ERCC5R4GMW8 1640 aa39.85■■■■□ 3.97
TMEM9-201ENST00000367330 UBTFP17480 764 aaKnown RBP39.67■■■■□ 3.94
TMEM9-201ENST00000367330 PRDM2Q13029 1718 aa39.51■■■■□ 3.92
TMEM9-201ENST00000367330 CLIP1P30622 1438 aa39.46■■■■□ 3.91
TMEM9-201ENST00000367330 ERICH3Q5RHP9 1530 aa39.44■■■■□ 3.9
TMEM9-201ENST00000367330 RAPGEF2Q9Y4G8 1499 aa39.44■■■■□ 3.9
TMEM9-201ENST00000367330 CFTRP13569 1480 aa39.42■■■■□ 3.9
TMEM9-201ENST00000367330 CUX1P39880 1505 aa39.37■■■■□ 3.89
TMEM9-201ENST00000367330 VPS8Q8N3P4 1428 aa39.36■■■■□ 3.89
TMEM9-201ENST00000367330 PRXQ9BXM0 1461 aa39.3■■■■□ 3.88
TMEM9-201ENST00000367330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.28■■■■□ 3.88
TMEM9-201ENST00000367330 CCER1Q8TC90 406 aaPredicted RBP39.27■■■■□ 3.88
TMEM9-201ENST00000367330 KIF27Q86VH2 1401 aa39.1■■■■□ 3.85
TMEM9-201ENST00000367330 TTBK1Q5TCY1 1321 aaPredicted RBP39.09■■■■□ 3.85
TMEM9-201ENST00000367330 ARAP1Q96P48 1450 aa38.96■■■■□ 3.83
TMEM9-201ENST00000367330 CADPSQ9ULU8 1353 aa38.91■■■■□ 3.82
TMEM9-201ENST00000367330 CC2D2AQ9P2K1 1620 aa38.87■■■■□ 3.81
TMEM9-201ENST00000367330 APLP2Q06481 763 aa38.84■■■■□ 3.81
TMEM9-201ENST00000367330 CUX2O14529 1486 aa38.68■■■■□ 3.78
TMEM9-201ENST00000367330 FGD5Q6ZNL6 1462 aa38.67■■■■□ 3.78
TMEM9-201ENST00000367330 ARHGAP35Q9NRY4 1499 aa38.64■■■■□ 3.78
TMEM9-201ENST00000367330 IGF1RP08069 1367 aa38.6■■■■□ 3.77
TMEM9-201ENST00000367330 RANGAP1P46060 587 aaPredicted RBP38.55■■■■□ 3.76
TMEM9-201ENST00000367330 HNRNPUL2Q1KMD3 747 aaKnown RBP38.54■■■■□ 3.76
TMEM9-201ENST00000367330 FANCD2Q9BXW9 1451 aa38.53■■■■□ 3.76
TMEM9-201ENST00000367330 DNMBPQ6XZF7 1577 aa38.53■■■■□ 3.76
TMEM9-201ENST00000367330 RRBP1Q9P2E9 1410 aaKnown RBP38.47■■■■□ 3.75
TMEM9-201ENST00000367330 MAP3K1Q13233 1512 aa38.45■■■■□ 3.75
TMEM9-201ENST00000367330 CARMIL1Q5VZK9 1371 aa38.42■■■■□ 3.74
TMEM9-201ENST00000367330 DIEXFQ68CQ4 756 aaKnown RBP38.41■■■■□ 3.74
TMEM9-201ENST00000367330 ABCA10Q8WWZ4 1543 aa38.36■■■■□ 3.73
TMEM9-201ENST00000367330 KANK4Q5T7N3 995 aaPredicted RBP38.34■■■■□ 3.73
TMEM9-201ENST00000367330 ZNF316A6NFI3 1004 aaPredicted RBP38.33■■■■□ 3.73
TMEM9-201ENST00000367330 TOPBP1Q92547 1522 aa38.33■■■■□ 3.73
TMEM9-201ENST00000367330 CLSPNQ9HAW4 1339 aa38.32■■■■□ 3.72
TMEM9-201ENST00000367330 TIAM1Q13009 1591 aa38.31■■■■□ 3.72
TMEM9-201ENST00000367330 LAMC3Q9Y6N6 1575 aa38.29■■■■□ 3.72
TMEM9-201ENST00000367330 CUL7Q14999 1698 aa38.29■■■■□ 3.72
TMEM9-201ENST00000367330 POLA1P09884 1462 aaPredicted RBP38.25■■■■□ 3.71
TMEM9-201ENST00000367330 WDR97A6NE52 1622 aa38.24■■■■□ 3.71
TMEM9-201ENST00000367330 CFAP43Q8NDM7 1665 aa38.22■■■■□ 3.71
TMEM9-201ENST00000367330 DHX57Q6P158 1386 aaKnown RBP38.16■■■■□ 3.7
TMEM9-201ENST00000367330 CCNB3Q8WWL7 1395 aa38.16■■■■□ 3.7
TMEM9-201ENST00000367330 CTTNBP2Q8WZ74 1663 aa38.15■■■■□ 3.7
TMEM9-201ENST00000367330 NESP48681 1621 aa38.15■■■■□ 3.7
TMEM9-201ENST00000367330 EFCAB5A4FU69 1503 aa38.14■■■■□ 3.7
TMEM9-201ENST00000367330 FHAD1B1AJZ9 1412 aa38.13■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms