RNA–Protein interactions for RNA: ENST00000327492.3

TOB2-201, Transcript of transducer of ERBB2, 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOB2, Length 4,561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOB2-201ENST00000327492 NISCHQ9Y2I1 1504 aa27.91■■■□□ 2.06
TOB2-201ENST00000327492 DCAF8L2P0C7V8 631 aa27.04■■□□□ 1.92
TOB2-201ENST00000327492 SUPT5HO00267 1087 aaKnown RBP25.74■■□□□ 1.71
TOB2-201ENST00000327492 SHROOM4Q9ULL8 1493 aa25.61■■□□□ 1.69
TOB2-201ENST00000327492 EHMT2Q96KQ7 1210 aa24.3■■□□□ 1.48
TOB2-201ENST00000327492 FAM9AQ8IZU1 332 aaPredicted RBP24.1■■□□□ 1.45
TOB2-201ENST00000327492 TRIM41Q8WV44 630 aa24.02■■□□□ 1.44
TOB2-201ENST00000327492 APLP2Q06481 763 aa24■■□□□ 1.43
TOB2-201ENST00000327492 PCGF6Q9BYE7 350 aa23.63■■□□□ 1.37
TOB2-201ENST00000327492 ABCC9O60706 1549 aa23.62■■□□□ 1.37
TOB2-201ENST00000327492 UBTFP17480 764 aaKnown RBP23.51■■□□□ 1.35
TOB2-201ENST00000327492 TTBK1Q5TCY1 1321 aaPredicted RBP23.44■■□□□ 1.34
TOB2-201ENST00000327492 CHIC1Q5VXU3 224 aa23.43■■□□□ 1.34
TOB2-201ENST00000327492 RANGAP1P46060 587 aaPredicted RBP23.41■■□□□ 1.34
TOB2-201ENST00000327492 ZEB1P37275 1124 aaPredicted RBP23.27■■□□□ 1.32
TOB2-201ENST00000327492 CCDC180Q9P1Z9 1646 aa23.19■■□□□ 1.3
TOB2-201ENST00000327492 ZCCHC6Q5VYS8 1495 aaKnown RBP23.19■■□□□ 1.3
TOB2-201ENST00000327492 ATP1B4Q9UN42 357 aaPredicted RBP23.17■■□□□ 1.3
TOB2-201ENST00000327492 PABPN1Q86U42 306 aaKnown RBP eCLIP23.16■■□□□ 1.3
TOB2-201ENST00000327492 CCER1Q8TC90 406 aaPredicted RBP23.13■■□□□ 1.29
TOB2-201ENST00000327492 LOC105371045A0A1W2PR82 267 aa23.05■■□□□ 1.28
TOB2-201ENST00000327492 TRIM26Q12899 539 aaPredicted RBP23.01■■□□□ 1.27
TOB2-201ENST00000327492 PPARGC1BQ86YN6 1023 aaKnown RBP22.88■■□□□ 1.25
TOB2-201ENST00000327492 PELP1Q8IZL8 1130 aaKnown RBP22.86■■□□□ 1.25
TOB2-201ENST00000327492 SCRIBQ14160 1630 aa22.73■■□□□ 1.23
TOB2-201ENST00000327492 CENPBP07199 599 aaPredicted RBP22.62■■□□□ 1.21
TOB2-201ENST00000327492 HRCP23327 699 aa22.6■■□□□ 1.21
TOB2-201ENST00000327492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.51■■□□□ 1.19
TOB2-201ENST00000327492 HNRNPUL2Q1KMD3 747 aaKnown RBP22.51■■□□□ 1.19
TOB2-201ENST00000327492 ITGAEP38570 1179 aa22.48■■□□□ 1.19
TOB2-201ENST00000327492 RB1CC1Q8TDY2 1594 aa22.44■■□□□ 1.18
TOB2-201ENST00000327492 NACADO15069 1562 aa22.4■■□□□ 1.18
TOB2-201ENST00000327492 CSRNP3Q8WYN3 585 aa22.39■■□□□ 1.17
TOB2-201ENST00000327492 DCAF1Q9Y4B6 1507 aa22.35■■□□□ 1.17
TOB2-201ENST00000327492 RSF1Q96T23 1441 aaPredicted RBP22.2■■□□□ 1.14
TOB2-201ENST00000327492 MYT1LQ9UL68 1186 aa22.14■■□□□ 1.14
TOB2-201ENST00000327492 FAM50AQ14320 339 aaKnown RBP22.12■■□□□ 1.13
TOB2-201ENST00000327492 YTHDC1Q96MU7 727 aaKnown RBP22.1■■□□□ 1.13
TOB2-201ENST00000327492 NEFLP07196 543 aa22.04■■□□□ 1.12
TOB2-201ENST00000327492 FBLN2P98095 1184 aa21.99■■□□□ 1.11
TOB2-201ENST00000327492 P3H3Q8IVL6 736 aa21.9■■□□□ 1.1
TOB2-201ENST00000327492 BAZ1AQ9NRL2 1556 aaPredicted RBP21.89■■□□□ 1.1
TOB2-201ENST00000327492 TRIM52Q96A61 297 aa21.86■■□□□ 1.09
TOB2-201ENST00000327492 POLR3GLQ9BT43 218 aa21.84■■□□□ 1.09
TOB2-201ENST00000327492 DIEXFQ68CQ4 756 aaKnown RBP21.83■■□□□ 1.08
TOB2-201ENST00000327492 BAZ1BQ9UIG0 1483 aaKnown RBP21.83■■□□□ 1.08
TOB2-201ENST00000327492 EEA1Q15075 1411 aa21.81■■□□□ 1.08
TOB2-201ENST00000327492 CECR2Q9BXF3 1484 aa21.8■■□□□ 1.08
TOB2-201ENST00000327492 MYO15BQ96JP2 1530 aa21.8■■□□□ 1.08
TOB2-201ENST00000327492 CDK11AQ9UQ88 783 aaPredicted RBP21.75■■□□□ 1.07
TOB2-201ENST00000327492 NEUROD1Q13562 356 aa21.73■■□□□ 1.07
TOB2-201ENST00000327492 WRNQ14191 1432 aaPredicted RBP eCLIP21.73■■□□□ 1.07
TOB2-201ENST00000327492 ERICH6Q7L0X2 663 aa21.66■■□□□ 1.06
TOB2-201ENST00000327492 ARID3CA6NKF2 412 aa21.63■■□□□ 1.05
TOB2-201ENST00000327492 CLIP1P30622 1438 aa21.61■■□□□ 1.05
TOB2-201ENST00000327492 GOLGA3Q08378 1498 aa21.58■■□□□ 1.05
TOB2-201ENST00000327492 ZNF316A6NFI3 1004 aaPredicted RBP21.56■■□□□ 1.04
TOB2-201ENST00000327492 MROH2BQ7Z745 1585 aa21.55■■□□□ 1.04
TOB2-201ENST00000327492 CNGB1Q14028 1251 aaPredicted RBP21.53■■□□□ 1.04
TOB2-201ENST00000327492 KIF27Q86VH2 1401 aa21.51■■□□□ 1.03
TOB2-201ENST00000327492 ZNF777Q9ULD5 760 aaPredicted RBP21.49■■□□□ 1.03
TOB2-201ENST00000327492 CEP162Q5TB80 1403 aa21.49■■□□□ 1.03
TOB2-201ENST00000327492 TNIKQ9UKE5 1360 aa21.47■■□□□ 1.03
TOB2-201ENST00000327492 CEP164Q9UPV0 1460 aa21.45■■□□□ 1.02
TOB2-201ENST00000327492 ZNF326Q5BKZ1 582 aaKnown RBP21.44■■□□□ 1.02
TOB2-201ENST00000327492 CHMP7Q8WUX9 453 aaPredicted RBP21.43■■□□□ 1.02
TOB2-201ENST00000327492 ANP32CO43423 234 aa21.41■■□□□ 1.02
TOB2-201ENST00000327492 MTUS2Q5JR59 1369 aa21.4■■□□□ 1.02
TOB2-201ENST00000327492 SMARCA2P51531 1590 aa21.39■■□□□ 1.01
TOB2-201ENST00000327492 SLC4A1APQ9BWU0 796 aaKnown RBP21.38■■□□□ 1.01
TOB2-201ENST00000327492 CCDC88BA6NC98 1476 aa21.38■■□□□ 1.01
TOB2-201ENST00000327492 TONSLQ96HA7 1378 aa21.3■■□□□ 1
TOB2-201ENST00000327492 NPM1P06748 294 aaKnown RBP eCLIP21.29■■□□□ 1
TOB2-201ENST00000327492 TOP2AP11388 1531 aaKnown RBP21.25■□□□□ 0.99
TOB2-201ENST00000327492 SOGA1O94964 1423 aa21.23■□□□□ 0.99
TOB2-201ENST00000327492 TSPY4P0CV99 314 aa21.21■□□□□ 0.99
TOB2-201ENST00000327492 TSPY10P0CW01 314 aa21.21■□□□□ 0.99
TOB2-201ENST00000327492 CHIC2Q9UKJ5 165 aa21.21■□□□□ 0.99
TOB2-201ENST00000327492 WIZO95785 1651 aa21.19■□□□□ 0.98
TOB2-201ENST00000327492 CUX2O14529 1486 aa21.16■□□□□ 0.98
TOB2-201ENST00000327492 CARMIL1Q5VZK9 1371 aa21.16■□□□□ 0.98
TOB2-201ENST00000327492 ERCC6Q03468 1493 aa21.12■□□□□ 0.97
TOB2-201ENST00000327492 ATAD2BQ9ULI0 1458 aa21.12■□□□□ 0.97
TOB2-201ENST00000327492 ABCC8Q09428 1581 aa21.12■□□□□ 0.97
TOB2-201ENST00000327492 PLEKHD1A6NEE1 506 aa21.11■□□□□ 0.97
TOB2-201ENST00000327492 ACIN1Q9UKV3 1341 aaKnown RBP21.09■□□□□ 0.97
TOB2-201ENST00000327492 SMARCA4P51532 1647 aa21.09■□□□□ 0.97
TOB2-201ENST00000327492 FHAD1B1AJZ9 1412 aa21.07■□□□□ 0.96
TOB2-201ENST00000327492 DAXXQ9UER7 740 aaPredicted RBP21.07■□□□□ 0.96
TOB2-201ENST00000327492 PDS5BQ9NTI5 1447 aa21.07■□□□□ 0.96
TOB2-201ENST00000327492 GTF3C3Q9Y5Q9 886 aa21.05■□□□□ 0.96
TOB2-201ENST00000327492 CADPSQ9ULU8 1353 aa21.03■□□□□ 0.96
TOB2-201ENST00000327492 ESF1Q9H501 851 aaKnown RBP20.99■□□□□ 0.95
TOB2-201ENST00000327492 RRP7BPQ9NSQ0 103 aa20.99■□□□□ 0.95
TOB2-201ENST00000327492 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.98■□□□□ 0.953e-6■□□□□ 9
TOB2-201ENST00000327492 DDX10Q13206 875 aaKnown RBP20.97■□□□□ 0.95
TOB2-201ENST00000327492 VPS8Q8N3P4 1428 aa20.97■□□□□ 0.95
TOB2-201ENST00000327492 CFDP1Q9UEE9 299 aaPredicted RBP20.95■□□□□ 0.95
TOB2-201ENST00000327492 MYT1Q01538 1121 aa20.94■□□□□ 0.94
TOB2-201ENST00000327492 CHGAP10645 457 aaKnown RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms