RNA–Protein interactions for RNA: ENST00000357244.6

RC3H2-202, Transcript of ring finger and CCCH-type domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RC3H2, Length 3,991 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-202ENST00000357244 NISCHQ9Y2I1 1504 aa25.03■■□□□ 1.6
RC3H2-202ENST00000357244 CCDC180Q9P1Z9 1646 aa21.93■■□□□ 1.1
RC3H2-202ENST00000357244 ZCCHC6Q5VYS8 1495 aaKnown RBP21.12■□□□□ 0.97
RC3H2-202ENST00000357244 DCAF1Q9Y4B6 1507 aa20.96■□□□□ 0.95
RC3H2-202ENST00000357244 MYO15BQ96JP2 1530 aa20.67■□□□□ 0.9
RC3H2-202ENST00000357244 NACADO15069 1562 aa20.31■□□□□ 0.84
RC3H2-202ENST00000357244 SHROOM4Q9ULL8 1493 aa20.13■□□□□ 0.81
RC3H2-202ENST00000357244 DCAF8L2P0C7V8 631 aa20.12■□□□□ 0.81
RC3H2-202ENST00000357244 RB1CC1Q8TDY2 1594 aa20.01■□□□□ 0.79
RC3H2-202ENST00000357244 ABCC9O60706 1549 aa20■□□□□ 0.79
RC3H2-202ENST00000357244 SCRIBQ14160 1630 aa19.81■□□□□ 0.76
RC3H2-202ENST00000357244 SUPT5HO00267 1087 aaKnown RBP19.57■□□□□ 0.72
RC3H2-202ENST00000357244 RSF1Q96T23 1441 aaPredicted RBP19.43■□□□□ 0.7
RC3H2-202ENST00000357244 UNC13AQ9UPW8 1703 aa19.41■□□□□ 0.7
RC3H2-202ENST00000357244 BAZ1AQ9NRL2 1556 aaPredicted RBP19.39■□□□□ 0.69
RC3H2-202ENST00000357244 BICRAQ9NZM4 1560 aa19.22■□□□□ 0.67
RC3H2-202ENST00000357244 MROH2BQ7Z745 1585 aa19.2■□□□□ 0.66
RC3H2-202ENST00000357244 CECR2Q9BXF3 1484 aa19.19■□□□□ 0.66
RC3H2-202ENST00000357244 SMARCA4P51532 1647 aa19.18■□□□□ 0.66
RC3H2-202ENST00000357244 PEG3Q9GZU2 1588 aa19.09■□□□□ 0.65
RC3H2-202ENST00000357244 TOP2AP11388 1531 aaKnown RBP19.07■□□□□ 0.64
RC3H2-202ENST00000357244 CHIC1Q5VXU3 224 aa19.06■□□□□ 0.64
RC3H2-202ENST00000357244 WIZO95785 1651 aa19.03■□□□□ 0.64
RC3H2-202ENST00000357244 SMARCA2P51531 1590 aa18.92■□□□□ 0.62
RC3H2-202ENST00000357244 EIF4G1Q04637 1599 aaKnown RBP18.8■□□□□ 0.6
RC3H2-202ENST00000357244 PABPN1Q86U42 306 aaKnown RBP eCLIP18.77■□□□□ 0.6
RC3H2-202ENST00000357244 ATAD2BQ9ULI0 1458 aa18.76■□□□□ 0.59
RC3H2-202ENST00000357244 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
RC3H2-202ENST00000357244 CCDC88BA6NC98 1476 aa18.72■□□□□ 0.59
RC3H2-202ENST00000357244 BAZ1BQ9UIG0 1483 aaKnown RBP18.69■□□□□ 0.58
RC3H2-202ENST00000357244 NCAPD3P42695 1498 aa18.66■□□□□ 0.58
RC3H2-202ENST00000357244 TRIM41Q8WV44 630 aa18.6■□□□□ 0.57
RC3H2-202ENST00000357244 EEA1Q15075 1411 aa18.48■□□□□ 0.55
RC3H2-202ENST00000357244 PRDM2Q13029 1718 aa18.34■□□□□ 0.53
RC3H2-202ENST00000357244 WRNQ14191 1432 aaPredicted RBP eCLIP18.33■□□□□ 0.52
RC3H2-202ENST00000357244 CFTRP13569 1480 aa18.27■□□□□ 0.52
RC3H2-202ENST00000357244 ABCC8Q09428 1581 aa18.27■□□□□ 0.52
RC3H2-202ENST00000357244 CC2D2AQ9P2K1 1620 aa18.25■□□□□ 0.51
RC3H2-202ENST00000357244 BIVM-ERCC5R4GMW8 1640 aa18.25■□□□□ 0.51
RC3H2-202ENST00000357244 TOP2BQ02880 1626 aa18.23■□□□□ 0.51
RC3H2-202ENST00000357244 SYNJ1O43426 1573 aa18.16■□□□□ 0.5
RC3H2-202ENST00000357244 CADPSQ9ULU8 1353 aa18.12■□□□□ 0.49
RC3H2-202ENST00000357244 KIF21BO75037 1637 aa18.11■□□□□ 0.49
RC3H2-202ENST00000357244 LOC105371045A0A1W2PR82 267 aa18.09■□□□□ 0.49
RC3H2-202ENST00000357244 GOLGA3Q08378 1498 aa18.06■□□□□ 0.48
RC3H2-202ENST00000357244 CEP164Q9UPV0 1460 aa18.06■□□□□ 0.48
RC3H2-202ENST00000357244 TNIKQ9UKE5 1360 aa18.05■□□□□ 0.48
RC3H2-202ENST00000357244 CSRNP3Q8WYN3 585 aa18.04■□□□□ 0.48
RC3H2-202ENST00000357244 LAMC3Q9Y6N6 1575 aa18.02■□□□□ 0.48
RC3H2-202ENST00000357244 SOGA1O94964 1423 aa18■□□□□ 0.47
RC3H2-202ENST00000357244 CUX1P39880 1505 aa17.98■□□□□ 0.47
RC3H2-202ENST00000357244 ERICH3Q5RHP9 1530 aa17.97■□□□□ 0.47
RC3H2-202ENST00000357244 FAM9AQ8IZU1 332 aaPredicted RBP17.97■□□□□ 0.47
RC3H2-202ENST00000357244 KIF27Q86VH2 1401 aa17.91■□□□□ 0.46
RC3H2-202ENST00000357244 DNMBPQ6XZF7 1577 aa17.89■□□□□ 0.45
RC3H2-202ENST00000357244 FANCD2Q9BXW9 1451 aa17.88■□□□□ 0.45
RC3H2-202ENST00000357244 TRIM26Q12899 539 aaPredicted RBP17.87■□□□□ 0.45
RC3H2-202ENST00000357244 CEP162Q5TB80 1403 aa17.85■□□□□ 0.45
RC3H2-202ENST00000357244 RUSC2Q8N2Y8 1516 aa17.84■□□□□ 0.45
RC3H2-202ENST00000357244 PRXQ9BXM0 1461 aa17.83■□□□□ 0.44
RC3H2-202ENST00000357244 PDS5BQ9NTI5 1447 aa17.83■□□□□ 0.44
RC3H2-202ENST00000357244 FGD5Q6ZNL6 1462 aa17.75■□□□□ 0.43
RC3H2-202ENST00000357244 ABCA10Q8WWZ4 1543 aa17.73■□□□□ 0.43
RC3H2-202ENST00000357244 TOPBP1Q92547 1522 aa17.73■□□□□ 0.43
RC3H2-202ENST00000357244 UBTFP17480 764 aaKnown RBP17.72■□□□□ 0.43
RC3H2-202ENST00000357244 RAPGEF2Q9Y4G8 1499 aa17.68■□□□□ 0.42
RC3H2-202ENST00000357244 CLIP1P30622 1438 aa17.68■□□□□ 0.42
RC3H2-202ENST00000357244 CUL7Q14999 1698 aa17.67■□□□□ 0.42
RC3H2-202ENST00000357244 CUX2O14529 1486 aa17.67■□□□□ 0.42
RC3H2-202ENST00000357244 WDR97A6NE52 1622 aa17.66■□□□□ 0.42
RC3H2-202ENST00000357244 PCGF6Q9BYE7 350 aa17.64■□□□□ 0.41
RC3H2-202ENST00000357244 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
RC3H2-202ENST00000357244 VPS8Q8N3P4 1428 aa17.62■□□□□ 0.41
RC3H2-202ENST00000357244 NESP48681 1621 aa17.6■□□□□ 0.41
RC3H2-202ENST00000357244 IGF1RP08069 1367 aa17.6■□□□□ 0.41
RC3H2-202ENST00000357244 URB2Q14146 1524 aaKnown RBP17.58■□□□□ 0.41
RC3H2-202ENST00000357244 HRCP23327 699 aa17.57■□□□□ 0.4
RC3H2-202ENST00000357244 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
RC3H2-202ENST00000357244 KIF21AQ7Z4S6 1674 aa17.55■□□□□ 0.4
RC3H2-202ENST00000357244 CARMIL1Q5VZK9 1371 aa17.55■□□□□ 0.4
RC3H2-202ENST00000357244 ZEB1P37275 1124 aaPredicted RBP17.54■□□□□ 0.4
RC3H2-202ENST00000357244 ABCA5Q8WWZ7 1642 aa17.54■□□□□ 0.4
RC3H2-202ENST00000357244 EFCAB5A4FU69 1503 aa17.49■□□□□ 0.39
RC3H2-202ENST00000357244 MAP3K1Q13233 1512 aa17.48■□□□□ 0.39
RC3H2-202ENST00000357244 WDR62O43379 1518 aa17.47■□□□□ 0.39
RC3H2-202ENST00000357244 EHMT2Q96KQ7 1210 aa17.47■□□□□ 0.39
RC3H2-202ENST00000357244 TARBP1Q13395 1621 aaKnown RBP17.46■□□□□ 0.39
RC3H2-202ENST00000357244 APLP2Q06481 763 aa17.44■□□□□ 0.38
RC3H2-202ENST00000357244 ARAP1Q96P48 1450 aa17.43■□□□□ 0.38
RC3H2-202ENST00000357244 RAD54L2Q9Y4B4 1467 aa17.43■□□□□ 0.38
RC3H2-202ENST00000357244 IFT140Q96RY7 1462 aa17.43■□□□□ 0.38
RC3H2-202ENST00000357244 CTTNBP2Q8WZ74 1663 aa17.43■□□□□ 0.38
RC3H2-202ENST00000357244 GAPVD1Q14C86 1478 aa17.43■□□□□ 0.38
RC3H2-202ENST00000357244 FHAD1B1AJZ9 1412 aa17.4■□□□□ 0.38
RC3H2-202ENST00000357244 ARHGAP35Q9NRY4 1499 aa17.38■□□□□ 0.37
RC3H2-202ENST00000357244 AQRO60306 1485 aaKnown RBP eCLIP17.37■□□□□ 0.372e-6■■■■■ 34.3
RC3H2-202ENST00000357244 PBRM1Q86U86 1689 aa17.35■□□□□ 0.37
RC3H2-202ENST00000357244 GRIN2BQ13224 1484 aa17.32■□□□□ 0.36
RC3H2-202ENST00000357244 ADAMTS12P58397 1594 aa17.29■□□□□ 0.36
RC3H2-202ENST00000357244 THOC2Q8NI27 1593 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms