RNA–Protein interactions for RNA: ENST00000579272.5

TRIM16-215, Transcript of tripartite motif containing 16, humanhuman

TSL 4

Gene TRIM16, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-215ENST00000579272 NISCHQ9Y2I1 1504 aa22.06■■□□□ 1.12
TRIM16-215ENST00000579272 AEBP2Q6ZN18 517 aaPredicted RBP20.39■□□□□ 0.85
TRIM16-215ENST00000579272 CHIC1Q5VXU3 224 aa19.89■□□□□ 0.77
TRIM16-215ENST00000579272 CCDC180Q9P1Z9 1646 aa19.31■□□□□ 0.68
TRIM16-215ENST00000579272 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.56
TRIM16-215ENST00000579272 DCAF1Q9Y4B6 1507 aa18.36■□□□□ 0.53
TRIM16-215ENST00000579272 MYO15BQ96JP2 1530 aa18.14■□□□□ 0.49
TRIM16-215ENST00000579272 DCAF8L2P0C7V8 631 aa18.1■□□□□ 0.49
TRIM16-215ENST00000579272 NACADO15069 1562 aa17.95■□□□□ 0.46
TRIM16-215ENST00000579272 ABCC9O60706 1549 aa17.93■□□□□ 0.46
TRIM16-215ENST00000579272 SHROOM4Q9ULL8 1493 aa17.86■□□□□ 0.45
TRIM16-215ENST00000579272 RB1CC1Q8TDY2 1594 aa17.75■□□□□ 0.43
TRIM16-215ENST00000579272 SCRIBQ14160 1630 aa17.57■□□□□ 0.4
TRIM16-215ENST00000579272 PHF23Q9BUL5 403 aaPredicted RBP17.49■□□□□ 0.39
TRIM16-215ENST00000579272 SUPT5HO00267 1087 aaKnown RBP17.33■□□□□ 0.36
TRIM16-215ENST00000579272 SENP3Q9H4L4 574 aaPredicted RBP17.31■□□□□ 0.36
TRIM16-215ENST00000579272 UNC13AQ9UPW8 1703 aa17.28■□□□□ 0.36
TRIM16-215ENST00000579272 RSF1Q96T23 1441 aaPredicted RBP17.1■□□□□ 0.33
TRIM16-215ENST00000579272 BAZ1AQ9NRL2 1556 aaPredicted RBP17.09■□□□□ 0.33
TRIM16-215ENST00000579272 DNAJC5BQ9UF47 199 aa17.06■□□□□ 0.32
TRIM16-215ENST00000579272 BICRAQ9NZM4 1560 aa17.05■□□□□ 0.32
TRIM16-215ENST00000579272 CECR2Q9BXF3 1484 aa16.99■□□□□ 0.31
TRIM16-215ENST00000579272 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
TRIM16-215ENST00000579272 SMARCA4P51532 1647 aa16.93■□□□□ 0.3
TRIM16-215ENST00000579272 PABPN1Q86U42 306 aaKnown RBP eCLIP16.88■□□□□ 0.29
TRIM16-215ENST00000579272 WIZO95785 1651 aa16.83■□□□□ 0.28
TRIM16-215ENST00000579272 PEG3Q9GZU2 1588 aa16.78■□□□□ 0.28
TRIM16-215ENST00000579272 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
TRIM16-215ENST00000579272 SMARCA2P51531 1590 aa16.72■□□□□ 0.27
TRIM16-215ENST00000579272 ATAD2BQ9ULI0 1458 aa16.6■□□□□ 0.25
TRIM16-215ENST00000579272 EIF4G1Q04637 1599 aaKnown RBP16.59■□□□□ 0.25
TRIM16-215ENST00000579272 BAZ1BQ9UIG0 1483 aaKnown RBP16.56■□□□□ 0.24
TRIM16-215ENST00000579272 HMGXB3Q12766 1538 aa16.52■□□□□ 0.24
TRIM16-215ENST00000579272 CCDC88BA6NC98 1476 aa16.52■□□□□ 0.23
TRIM16-215ENST00000579272 NCAPD3P42695 1498 aa16.51■□□□□ 0.23
TRIM16-215ENST00000579272 TRIM41Q8WV44 630 aa16.42■□□□□ 0.22
TRIM16-215ENST00000579272 CC2D2AQ9P2K1 1620 aa16.29■□□□□ 0.2
TRIM16-215ENST00000579272 PRDM2Q13029 1718 aa16.17■□□□□ 0.18
TRIM16-215ENST00000579272 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
TRIM16-215ENST00000579272 WRNQ14191 1432 aaPredicted RBP eCLIP16.14■□□□□ 0.17
TRIM16-215ENST00000579272 CFTRP13569 1480 aa16.14■□□□□ 0.17
TRIM16-215ENST00000579272 EEA1Q15075 1411 aa16.13■□□□□ 0.17
TRIM16-215ENST00000579272 ABCC8Q09428 1581 aa16.13■□□□□ 0.17
TRIM16-215ENST00000579272 FOXD1Q16676 465 aa16.08■□□□□ 0.16
TRIM16-215ENST00000579272 CADPSQ9ULU8 1353 aa16.07■□□□□ 0.16
TRIM16-215ENST00000579272 TOP2BQ02880 1626 aa16.02■□□□□ 0.16
TRIM16-215ENST00000579272 BIVM-ERCC5R4GMW8 1640 aa16.01■□□□□ 0.15
TRIM16-215ENST00000579272 SYNJ1O43426 1573 aa15.98■□□□□ 0.15
TRIM16-215ENST00000579272 LAMC3Q9Y6N6 1575 aa15.98■□□□□ 0.15
TRIM16-215ENST00000579272 DNAJC5Q9H3Z4 198 aa15.97■□□□□ 0.15
TRIM16-215ENST00000579272 LOC105371045A0A1W2PR82 267 aa15.95■□□□□ 0.14
TRIM16-215ENST00000579272 FAM9AQ8IZU1 332 aaPredicted RBP15.95■□□□□ 0.14
TRIM16-215ENST00000579272 CSRNP3Q8WYN3 585 aa15.91■□□□□ 0.14
TRIM16-215ENST00000579272 FANCD2Q9BXW9 1451 aa15.86■□□□□ 0.13
TRIM16-215ENST00000579272 CUX1P39880 1505 aa15.86■□□□□ 0.13
TRIM16-215ENST00000579272 SOGA1O94964 1423 aa15.85■□□□□ 0.13
TRIM16-215ENST00000579272 PDS5BQ9NTI5 1447 aa15.85■□□□□ 0.13
TRIM16-215ENST00000579272 KIF21BO75037 1637 aa15.81■□□□□ 0.12
TRIM16-215ENST00000579272 CEP164Q9UPV0 1460 aa15.81■□□□□ 0.12
TRIM16-215ENST00000579272 GOLGA3Q08378 1498 aa15.79■□□□□ 0.12
TRIM16-215ENST00000579272 KIF27Q86VH2 1401 aa15.79■□□□□ 0.12
TRIM16-215ENST00000579272 DNMBPQ6XZF7 1577 aa15.79■□□□□ 0.12
TRIM16-215ENST00000579272 TNIKQ9UKE5 1360 aa15.77■□□□□ 0.12
TRIM16-215ENST00000579272 RUSC2Q8N2Y8 1516 aa15.73■□□□□ 0.11
TRIM16-215ENST00000579272 NESP48681 1621 aa15.72■□□□□ 0.11
TRIM16-215ENST00000579272 ERICH3Q5RHP9 1530 aa15.71■□□□□ 0.11
TRIM16-215ENST00000579272 UBTFP17480 764 aaKnown RBP15.7■□□□□ 0.1
TRIM16-215ENST00000579272 FGD5Q6ZNL6 1462 aa15.7■□□□□ 0.1
TRIM16-215ENST00000579272 TOPBP1Q92547 1522 aa15.69■□□□□ 0.1
TRIM16-215ENST00000579272 KIF21AQ7Z4S6 1674 aa15.64■□□□□ 0.09
TRIM16-215ENST00000579272 PRXQ9BXM0 1461 aa15.64■□□□□ 0.09
TRIM16-215ENST00000579272 CUX2O14529 1486 aa15.63■□□□□ 0.09
TRIM16-215ENST00000579272 ABCA10Q8WWZ4 1543 aa15.63■□□□□ 0.09
TRIM16-215ENST00000579272 CEP162Q5TB80 1403 aa15.62■□□□□ 0.09
TRIM16-215ENST00000579272 POLA1P09884 1462 aaPredicted RBP15.6■□□□□ 0.09
TRIM16-215ENST00000579272 EHMT2Q96KQ7 1210 aa15.6■□□□□ 0.09
TRIM16-215ENST00000579272 URB2Q14146 1524 aaKnown RBP15.59■□□□□ 0.09
TRIM16-215ENST00000579272 MRC2Q9UBG0 1479 aa15.58■□□□□ 0.08
TRIM16-215ENST00000579272 RAPGEF2Q9Y4G8 1499 aa15.56■□□□□ 0.08
TRIM16-215ENST00000579272 TRIM26Q12899 539 aaPredicted RBP15.55■□□□□ 0.08
TRIM16-215ENST00000579272 CUL7Q14999 1698 aa15.54■□□□□ 0.08
TRIM16-215ENST00000579272 IGF1RP08069 1367 aa15.54■□□□□ 0.08
TRIM16-215ENST00000579272 WDR97A6NE52 1622 aa15.53■□□□□ 0.08
TRIM16-215ENST00000579272 CLIP1P30622 1438 aa15.51■□□□□ 0.07
TRIM16-215ENST00000579272 CARMIL1Q5VZK9 1371 aa15.51■□□□□ 0.07
TRIM16-215ENST00000579272 RAD54L2Q9Y4B4 1467 aa15.48■□□□□ 0.07
TRIM16-215ENST00000579272 WDR62O43379 1518 aa15.48■□□□□ 0.07
TRIM16-215ENST00000579272 ERCC6Q03468 1493 aa15.47■□□□□ 0.07
TRIM16-215ENST00000579272 ADRA2BP18089 450 aa15.46■□□□□ 0.07
TRIM16-215ENST00000579272 TARBP1Q13395 1621 aaKnown RBP15.46■□□□□ 0.06
TRIM16-215ENST00000579272 ABCA5Q8WWZ7 1642 aa15.46■□□□□ 0.06
TRIM16-215ENST00000579272 PPP6R1Q9UPN7 881 aa15.45■□□□□ 0.06
TRIM16-215ENST00000579272 GAPVD1Q14C86 1478 aa15.45■□□□□ 0.06
TRIM16-215ENST00000579272 IFT140Q96RY7 1462 aa15.44■□□□□ 0.06
TRIM16-215ENST00000579272 PCGF6Q9BYE7 350 aa15.41■□□□□ 0.06
TRIM16-215ENST00000579272 APLP2Q06481 763 aa15.4■□□□□ 0.06
TRIM16-215ENST00000579272 VPS8Q8N3P4 1428 aa15.4■□□□□ 0.06
TRIM16-215ENST00000579272 TDRD9Q8NDG6 1382 aaKnown RBP15.36■□□□□ 0.05
TRIM16-215ENST00000579272 PBRM1Q86U86 1689 aa15.35■□□□□ 0.05
TRIM16-215ENST00000579272 CTTNBP2Q8WZ74 1663 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms