RNA–Protein interactions for RNA: ENST00000515807.5

PAPD4-217, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 4

Gene PAPD4, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-217ENST00000515807 NISCHQ9Y2I1 1504 aa30.41■■■□□ 2.46
PAPD4-217ENST00000515807 CCDC180Q9P1Z9 1646 aa27.23■■□□□ 1.95
PAPD4-217ENST00000515807 ABCC9O60706 1549 aa26.91■■□□□ 1.9
PAPD4-217ENST00000515807 RB1CC1Q8TDY2 1594 aa25.86■■□□□ 1.73
PAPD4-217ENST00000515807 NACADO15069 1562 aa25.75■■□□□ 1.71
PAPD4-217ENST00000515807 DCAF8L2P0C7V8 631 aa25.57■■□□□ 1.68
PAPD4-217ENST00000515807 MYO15BQ96JP2 1530 aa25.53■■□□□ 1.68
PAPD4-217ENST00000515807 DCAF1Q9Y4B6 1507 aa25.24■■□□□ 1.63
PAPD4-217ENST00000515807 ZCCHC6Q5VYS8 1495 aaKnown RBP25.24■■□□□ 1.63
PAPD4-217ENST00000515807 PABPN1Q86U42 306 aaKnown RBP eCLIP25.08■■□□□ 1.61
PAPD4-217ENST00000515807 UNC13AQ9UPW8 1703 aa25.02■■□□□ 1.6
PAPD4-217ENST00000515807 DNAJC5BQ9UF47 199 aa24.97■■□□□ 1.59
PAPD4-217ENST00000515807 BICRAQ9NZM4 1560 aa24.93■■□□□ 1.58
PAPD4-217ENST00000515807 SHROOM4Q9ULL8 1493 aa24.92■■□□□ 1.58
PAPD4-217ENST00000515807 SCRIBQ14160 1630 aa24.69■■□□□ 1.54
PAPD4-217ENST00000515807 EIF4G1Q04637 1599 aaKnown RBP24.37■■□□□ 1.49
PAPD4-217ENST00000515807 CC2D2AQ9P2K1 1620 aa24.34■■□□□ 1.49
PAPD4-217ENST00000515807 CECR2Q9BXF3 1484 aa24.3■■□□□ 1.48
PAPD4-217ENST00000515807 NCAPD3P42695 1498 aa23.75■■□□□ 1.39
PAPD4-217ENST00000515807 SMARCA2P51531 1590 aa23.68■■□□□ 1.38
PAPD4-217ENST00000515807 BAZ1AQ9NRL2 1556 aaPredicted RBP23.65■■□□□ 1.38
PAPD4-217ENST00000515807 ATAD2BQ9ULI0 1458 aa23.64■■□□□ 1.38
PAPD4-217ENST00000515807 SMARCA4P51532 1647 aa23.64■■□□□ 1.38
PAPD4-217ENST00000515807 HMGXB3Q12766 1538 aa23.59■■□□□ 1.37
PAPD4-217ENST00000515807 PEG3Q9GZU2 1588 aa23.48■■□□□ 1.35
PAPD4-217ENST00000515807 BAZ1BQ9UIG0 1483 aaKnown RBP23.47■■□□□ 1.35
PAPD4-217ENST00000515807 ERCC6Q03468 1493 aa23.35■■□□□ 1.33
PAPD4-217ENST00000515807 MROH2BQ7Z745 1585 aa23.34■■□□□ 1.33
PAPD4-217ENST00000515807 CUX2O14529 1486 aa23.28■■□□□ 1.32
PAPD4-217ENST00000515807 LAMC3Q9Y6N6 1575 aa23.18■■□□□ 1.3
PAPD4-217ENST00000515807 NESP48681 1621 aa23.12■■□□□ 1.29
PAPD4-217ENST00000515807 PDS5BQ9NTI5 1447 aa23.11■■□□□ 1.29
PAPD4-217ENST00000515807 CADPSQ9ULU8 1353 aa23.04■■□□□ 1.28
PAPD4-217ENST00000515807 WIZO95785 1651 aa23.03■■□□□ 1.28
PAPD4-217ENST00000515807 RSF1Q96T23 1441 aaPredicted RBP23■■□□□ 1.27
PAPD4-217ENST00000515807 DNAJC5Q9H3Z4 198 aa22.98■■□□□ 1.27
PAPD4-217ENST00000515807 THOC2Q8NI27 1593 aaKnown RBP22.89■■□□□ 1.26
PAPD4-217ENST00000515807 TOP2AP11388 1531 aaKnown RBP22.88■■□□□ 1.25
PAPD4-217ENST00000515807 KIF21AQ7Z4S6 1674 aa22.83■■□□□ 1.24
PAPD4-217ENST00000515807 CFTRP13569 1480 aa22.8■■□□□ 1.24
PAPD4-217ENST00000515807 MRC2Q9UBG0 1479 aa22.8■■□□□ 1.24
PAPD4-217ENST00000515807 CEP164Q9UPV0 1460 aa22.77■■□□□ 1.24
PAPD4-217ENST00000515807 FANCD2Q9BXW9 1451 aa22.73■■□□□ 1.23
PAPD4-217ENST00000515807 WDR62O43379 1518 aa22.72■■□□□ 1.23
PAPD4-217ENST00000515807 CCDC88BA6NC98 1476 aa22.59■■□□□ 1.21
PAPD4-217ENST00000515807 PRDM2Q13029 1718 aa22.5■■□□□ 1.19
PAPD4-217ENST00000515807 URB2Q14146 1524 aaKnown RBP22.46■■□□□ 1.19
PAPD4-217ENST00000515807 ABCC8Q09428 1581 aa22.45■■□□□ 1.18
PAPD4-217ENST00000515807 IFT140Q96RY7 1462 aa22.34■■□□□ 1.17
PAPD4-217ENST00000515807 TOPBP1Q92547 1522 aa22.3■■□□□ 1.16
PAPD4-217ENST00000515807 OSCARQ8IYS5 282 aa22.27■■□□□ 1.16
PAPD4-217ENST00000515807 DNMBPQ6XZF7 1577 aa22.26■■□□□ 1.15
PAPD4-217ENST00000515807 ZNF608Q9ULD9 1512 aaPredicted RBP22.11■■□□□ 1.13
PAPD4-217ENST00000515807 SUPT5HO00267 1087 aaKnown RBP22.11■■□□□ 1.13
PAPD4-217ENST00000515807 POLA1P09884 1462 aaPredicted RBP22.08■■□□□ 1.12
PAPD4-217ENST00000515807 SOGA1O94964 1423 aa22.05■■□□□ 1.12
PAPD4-217ENST00000515807 EIF4G3O43432 1585 aaKnown RBP22.04■■□□□ 1.12
PAPD4-217ENST00000515807 TARBP1Q13395 1621 aaKnown RBP22.04■■□□□ 1.12
PAPD4-217ENST00000515807 WDR97A6NE52 1622 aa22.02■■□□□ 1.12
PAPD4-217ENST00000515807 AQRO60306 1485 aaKnown RBP eCLIP21.98■■□□□ 1.11
PAPD4-217ENST00000515807 TRIM41Q8WV44 630 aa21.97■■□□□ 1.11
PAPD4-217ENST00000515807 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
PAPD4-217ENST00000515807 CUX1P39880 1505 aa21.93■■□□□ 1.1
PAPD4-217ENST00000515807 RAD54L2Q9Y4B4 1467 aa21.93■■□□□ 1.1
PAPD4-217ENST00000515807 TDRD9Q8NDG6 1382 aaKnown RBP21.9■■□□□ 1.1
PAPD4-217ENST00000515807 FBLN2P98095 1184 aa21.87■■□□□ 1.09
PAPD4-217ENST00000515807 GRIN2BQ13224 1484 aa21.85■■□□□ 1.09
PAPD4-217ENST00000515807 MAGI1Q96QZ7 1491 aaPredicted RBP21.85■■□□□ 1.09
PAPD4-217ENST00000515807 CHMP7Q8WUX9 453 aaPredicted RBP21.81■■□□□ 1.08
PAPD4-217ENST00000515807 WRNQ14191 1432 aaPredicted RBP eCLIP21.8■■□□□ 1.08
PAPD4-217ENST00000515807 ARHGEF11O15085 1522 aa21.79■■□□□ 1.08
PAPD4-217ENST00000515807 ABCA10Q8WWZ4 1543 aa21.79■■□□□ 1.08
PAPD4-217ENST00000515807 SNAPC4Q5SXM2 1469 aa21.78■■□□□ 1.08
PAPD4-217ENST00000515807 CHD1O14646 1710 aa21.77■■□□□ 1.08
PAPD4-217ENST00000515807 GAPVD1Q14C86 1478 aa21.77■■□□□ 1.08
PAPD4-217ENST00000515807 RIMBP3CA6NJZ7 1639 aa21.77■■□□□ 1.08
PAPD4-217ENST00000515807 RIMBP3BA6NNM3 1639 aa21.77■■□□□ 1.08
PAPD4-217ENST00000515807 RIMBP3Q9UFD9 1639 aa21.77■■□□□ 1.08
PAPD4-217ENST00000515807 SYNJ2O15056 1496 aa21.75■■□□□ 1.07
PAPD4-217ENST00000515807 SYNJ1O43426 1573 aa21.72■■□□□ 1.07
PAPD4-217ENST00000515807 TOP2BQ02880 1626 aa21.71■■□□□ 1.07
PAPD4-217ENST00000515807 BIVM-ERCC5R4GMW8 1640 aa21.68■■□□□ 1.06
PAPD4-217ENST00000515807 ABCA5Q8WWZ7 1642 aa21.66■■□□□ 1.06
PAPD4-217ENST00000515807 CYB5RLQ6IPT4 315 aa21.64■■□□□ 1.05
PAPD4-217ENST00000515807 PBRM1Q86U86 1689 aa21.63■■□□□ 1.05
PAPD4-217ENST00000515807 CLASP1Q7Z460 1538 aa21.61■■□□□ 1.05
PAPD4-217ENST00000515807 ERICH3Q5RHP9 1530 aa21.55■■□□□ 1.04
PAPD4-217ENST00000515807 FHAD1B1AJZ9 1412 aa21.55■■□□□ 1.04
PAPD4-217ENST00000515807 ARAP1Q96P48 1450 aa21.54■■□□□ 1.04
PAPD4-217ENST00000515807 GRIN2AQ12879 1464 aa21.52■■□□□ 1.04
PAPD4-217ENST00000515807 ADAMTS12P58397 1594 aa21.48■■□□□ 1.03
PAPD4-217ENST00000515807 NUP160Q12769 1436 aa21.45■■□□□ 1.02
PAPD4-217ENST00000515807 AEBP2Q6ZN18 517 aaPredicted RBP21.39■■□□□ 1.01
PAPD4-217ENST00000515807 KIF27Q86VH2 1401 aa21.38■■□□□ 1.01
PAPD4-217ENST00000515807 TRHP20396 242 aaPredicted RBP21.38■■□□□ 1.01
PAPD4-217ENST00000515807 CEP170Q5SW79 1584 aa21.35■■□□□ 1.01
PAPD4-217ENST00000515807 SHROOM2Q13796 1616 aa21.29■■□□□ 1
PAPD4-217ENST00000515807 IGF1RP08069 1367 aa21.27■■□□□ 1
PAPD4-217ENST00000515807 JPH4Q96JJ6 628 aa21.27■■□□□ 1
PAPD4-217ENST00000515807 CUL7Q14999 1698 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms