RNA–Protein interactions for RNA: ENST00000556232.5

AP4S1-208, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

TSL 4

Gene AP4S1, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-208ENST00000556232 NISCHQ9Y2I1 1504 aa24.04■■□□□ 1.44
AP4S1-208ENST00000556232 ABCC9O60706 1549 aa22.31■■□□□ 1.16
AP4S1-208ENST00000556232 CCDC180Q9P1Z9 1646 aa21.75■■□□□ 1.07
AP4S1-208ENST00000556232 DNAJC5BQ9UF47 199 aa21.47■■□□□ 1.03
AP4S1-208ENST00000556232 RB1CC1Q8TDY2 1594 aa20.99■□□□□ 0.95
AP4S1-208ENST00000556232 PABPN1Q86U42 306 aaKnown RBP eCLIP20.74■□□□□ 0.91
AP4S1-208ENST00000556232 NACADO15069 1562 aa20.73■□□□□ 0.91
AP4S1-208ENST00000556232 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
AP4S1-208ENST00000556232 UNC13AQ9UPW8 1703 aa20.49■□□□□ 0.87
AP4S1-208ENST00000556232 BICRAQ9NZM4 1560 aa20.39■□□□□ 0.85
AP4S1-208ENST00000556232 MYO15BQ96JP2 1530 aa20.27■□□□□ 0.83
AP4S1-208ENST00000556232 CECR2Q9BXF3 1484 aa20.15■□□□□ 0.82
AP4S1-208ENST00000556232 DNAJC5Q9H3Z4 198 aa20.12■□□□□ 0.81
AP4S1-208ENST00000556232 CC2D2AQ9P2K1 1620 aa20.12■□□□□ 0.81
AP4S1-208ENST00000556232 SHROOM4Q9ULL8 1493 aa20.04■□□□□ 0.8
AP4S1-208ENST00000556232 EIF4G1Q04637 1599 aaKnown RBP19.93■□□□□ 0.78
AP4S1-208ENST00000556232 DCAF1Q9Y4B6 1507 aa19.81■□□□□ 0.76
AP4S1-208ENST00000556232 SCRIBQ14160 1630 aa19.77■□□□□ 0.76
AP4S1-208ENST00000556232 ZCCHC6Q5VYS8 1495 aaKnown RBP19.76■□□□□ 0.75
AP4S1-208ENST00000556232 CUX2O14529 1486 aa19.43■□□□□ 0.7
AP4S1-208ENST00000556232 ERCC6Q03468 1493 aa19.28■□□□□ 0.68
AP4S1-208ENST00000556232 NCAPD3P42695 1498 aa19.17■□□□□ 0.66
AP4S1-208ENST00000556232 ATAD2BQ9ULI0 1458 aa19.02■□□□□ 0.63
AP4S1-208ENST00000556232 NESP48681 1621 aa19■□□□□ 0.63
AP4S1-208ENST00000556232 TRIM41Q8WV44 630 aa18.99■□□□□ 0.63
AP4S1-208ENST00000556232 HMGXB3Q12766 1538 aa18.91■□□□□ 0.62
AP4S1-208ENST00000556232 SMARCA2P51531 1590 aa18.91■□□□□ 0.62
AP4S1-208ENST00000556232 THOC2Q8NI27 1593 aaKnown RBP18.87■□□□□ 0.61
AP4S1-208ENST00000556232 SMARCA4P51532 1647 aa18.82■□□□□ 0.6
AP4S1-208ENST00000556232 LAMC3Q9Y6N6 1575 aa18.79■□□□□ 0.6
AP4S1-208ENST00000556232 BAZ1BQ9UIG0 1483 aaKnown RBP18.78■□□□□ 0.6
AP4S1-208ENST00000556232 PDS5BQ9NTI5 1447 aa18.74■□□□□ 0.59
AP4S1-208ENST00000556232 KIF21AQ7Z4S6 1674 aa18.7■□□□□ 0.58
AP4S1-208ENST00000556232 BAZ1AQ9NRL2 1556 aaPredicted RBP18.68■□□□□ 0.58
AP4S1-208ENST00000556232 PEG3Q9GZU2 1588 aa18.65■□□□□ 0.58
AP4S1-208ENST00000556232 CADPSQ9ULU8 1353 aa18.57■□□□□ 0.56
AP4S1-208ENST00000556232 OSCARQ8IYS5 282 aa18.56■□□□□ 0.56
AP4S1-208ENST00000556232 MRC2Q9UBG0 1479 aa18.56■□□□□ 0.56
AP4S1-208ENST00000556232 WDR62O43379 1518 aa18.51■□□□□ 0.55
AP4S1-208ENST00000556232 MROH2BQ7Z745 1585 aa18.51■□□□□ 0.55
AP4S1-208ENST00000556232 CEP164Q9UPV0 1460 aa18.38■□□□□ 0.53
AP4S1-208ENST00000556232 FANCD2Q9BXW9 1451 aa18.33■□□□□ 0.52
AP4S1-208ENST00000556232 RIMBP3CA6NJZ7 1639 aa18.27■□□□□ 0.51
AP4S1-208ENST00000556232 RIMBP3BA6NNM3 1639 aa18.27■□□□□ 0.51
AP4S1-208ENST00000556232 RIMBP3Q9UFD9 1639 aa18.27■□□□□ 0.51
AP4S1-208ENST00000556232 WIZO95785 1651 aa18.25■□□□□ 0.51
AP4S1-208ENST00000556232 CFTRP13569 1480 aa18.22■□□□□ 0.51
AP4S1-208ENST00000556232 URB2Q14146 1524 aaKnown RBP18.19■□□□□ 0.5
AP4S1-208ENST00000556232 ARHGEF11O15085 1522 aa18.15■□□□□ 0.5
AP4S1-208ENST00000556232 CYB5RLQ6IPT4 315 aa18.15■□□□□ 0.5
AP4S1-208ENST00000556232 TRHP20396 242 aaPredicted RBP18.12■□□□□ 0.49
AP4S1-208ENST00000556232 ZNF608Q9ULD9 1512 aaPredicted RBP18.07■□□□□ 0.48
AP4S1-208ENST00000556232 IFT140Q96RY7 1462 aa18.05■□□□□ 0.48
AP4S1-208ENST00000556232 AEBP2Q6ZN18 517 aaPredicted RBP17.99■□□□□ 0.47
AP4S1-208ENST00000556232 TOP2AP11388 1531 aaKnown RBP17.96■□□□□ 0.47
AP4S1-208ENST00000556232 RSF1Q96T23 1441 aaPredicted RBP17.95■□□□□ 0.46
AP4S1-208ENST00000556232 PRDM2Q13029 1718 aa17.93■□□□□ 0.46
AP4S1-208ENST00000556232 ARAP1Q96P48 1450 aa17.93■□□□□ 0.46
AP4S1-208ENST00000556232 TOPBP1Q92547 1522 aa17.92■□□□□ 0.46
AP4S1-208ENST00000556232 FBLN2P98095 1184 aa17.9■□□□□ 0.46
AP4S1-208ENST00000556232 EIF4G3O43432 1585 aaKnown RBP17.89■□□□□ 0.45
AP4S1-208ENST00000556232 ABCC8Q09428 1581 aa17.89■□□□□ 0.45
AP4S1-208ENST00000556232 CHD1O14646 1710 aa17.87■□□□□ 0.45
AP4S1-208ENST00000556232 AQRO60306 1485 aaKnown RBP eCLIP17.87■□□□□ 0.45
AP4S1-208ENST00000556232 CCDC88BA6NC98 1476 aa17.82■□□□□ 0.44
AP4S1-208ENST00000556232 TARBP1Q13395 1621 aaKnown RBP17.79■□□□□ 0.44
AP4S1-208ENST00000556232 DNMBPQ6XZF7 1577 aa17.79■□□□□ 0.44
AP4S1-208ENST00000556232 POLA1P09884 1462 aaPredicted RBP17.69■□□□□ 0.42
AP4S1-208ENST00000556232 TDRD9Q8NDG6 1382 aaKnown RBP17.68■□□□□ 0.42
AP4S1-208ENST00000556232 CHMP7Q8WUX9 453 aaPredicted RBP17.68■□□□□ 0.42
AP4S1-208ENST00000556232 CLASP1Q7Z460 1538 aa17.67■□□□□ 0.42
AP4S1-208ENST00000556232 SOGA1O94964 1423 aa17.66■□□□□ 0.42
AP4S1-208ENST00000556232 RAD54L2Q9Y4B4 1467 aa17.66■□□□□ 0.42
AP4S1-208ENST00000556232 SNAPC4Q5SXM2 1469 aa17.62■□□□□ 0.41
AP4S1-208ENST00000556232 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
AP4S1-208ENST00000556232 MAGI1Q96QZ7 1491 aaPredicted RBP17.56■□□□□ 0.4
AP4S1-208ENST00000556232 WDR97A6NE52 1622 aa17.55■□□□□ 0.4
AP4S1-208ENST00000556232 GAPVD1Q14C86 1478 aa17.55■□□□□ 0.4
AP4S1-208ENST00000556232 SYNJ2O15056 1496 aa17.52■□□□□ 0.4
AP4S1-208ENST00000556232 GRIN2BQ13224 1484 aa17.52■□□□□ 0.4
AP4S1-208ENST00000556232 FGD5Q6ZNL6 1462 aa17.5■□□□□ 0.39
AP4S1-208ENST00000556232 CUX1P39880 1505 aa17.41■□□□□ 0.38
AP4S1-208ENST00000556232 PBRM1Q86U86 1689 aa17.37■□□□□ 0.37
AP4S1-208ENST00000556232 ERCC6L2Q5T890 1561 aa17.36■□□□□ 0.37
AP4S1-208ENST00000556232 CEP170Q5SW79 1584 aa17.29■□□□□ 0.36
AP4S1-208ENST00000556232 GRIN2AQ12879 1464 aa17.29■□□□□ 0.36
AP4S1-208ENST00000556232 KIF13AQ9H1H9 1805 aa17.28■□□□□ 0.36
AP4S1-208ENST00000556232 ABCA10Q8WWZ4 1543 aa17.28■□□□□ 0.36
AP4S1-208ENST00000556232 ABCA5Q8WWZ7 1642 aa17.27■□□□□ 0.36
AP4S1-208ENST00000556232 NUP160Q12769 1436 aa17.25■□□□□ 0.35
AP4S1-208ENST00000556232 ILDR1Q86SU0 546 aaPredicted RBP17.24■□□□□ 0.35
AP4S1-208ENST00000556232 FAM69CQ0P6D2 419 aa17.23■□□□□ 0.35
AP4S1-208ENST00000556232 KDM4FA0A1W2PPD8 638 aa17.22■□□□□ 0.35
AP4S1-208ENST00000556232 SHROOM2Q13796 1616 aa17.21■□□□□ 0.35
AP4S1-208ENST00000556232 NPM1P06748 294 aaKnown RBP eCLIP17.19■□□□□ 0.34
AP4S1-208ENST00000556232 ADAMTS12P58397 1594 aa17.17■□□□□ 0.34
AP4S1-208ENST00000556232 JPH4Q96JJ6 628 aa17.17■□□□□ 0.34
AP4S1-208ENST00000556232 FHAD1B1AJZ9 1412 aa17.16■□□□□ 0.34
AP4S1-208ENST00000556232 PRG4Q92954 1404 aaPredicted RBP17.16■□□□□ 0.34
AP4S1-208ENST00000556232 ABCC10Q5T3U5 1492 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 267.2 ms