RNA–Protein interactions for RNA: ENST00000580388.5

TRIM16-220, Transcript of tripartite motif containing 16, humanhuman

TSL 5

Gene TRIM16, Length 516 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-220ENST00000580388 NISCHQ9Y2I1 1504 aa20.65■□□□□ 0.9
TRIM16-220ENST00000580388 CCDC180Q9P1Z9 1646 aa17.91■□□□□ 0.46
TRIM16-220ENST00000580388 ABCC9O60706 1549 aa17.48■□□□□ 0.39
TRIM16-220ENST00000580388 ZCCHC6Q5VYS8 1495 aaKnown RBP17.37■□□□□ 0.37
TRIM16-220ENST00000580388 DNAJC5BQ9UF47 199 aa17.29■□□□□ 0.36
TRIM16-220ENST00000580388 DCAF1Q9Y4B6 1507 aa17.03■□□□□ 0.32
TRIM16-220ENST00000580388 SHROOM4Q9ULL8 1493 aa16.99■□□□□ 0.31
TRIM16-220ENST00000580388 DCAF8L2P0C7V8 631 aa16.98■□□□□ 0.31
TRIM16-220ENST00000580388 MYO15BQ96JP2 1530 aa16.75■□□□□ 0.27
TRIM16-220ENST00000580388 NACADO15069 1562 aa16.64■□□□□ 0.25
TRIM16-220ENST00000580388 SCRIBQ14160 1630 aa16.56■□□□□ 0.24
TRIM16-220ENST00000580388 RB1CC1Q8TDY2 1594 aa16.46■□□□□ 0.23
TRIM16-220ENST00000580388 DNAJC5Q9H3Z4 198 aa16.45■□□□□ 0.22
TRIM16-220ENST00000580388 SUPT5HO00267 1087 aaKnown RBP16.36■□□□□ 0.21
TRIM16-220ENST00000580388 UNC13AQ9UPW8 1703 aa16.28■□□□□ 0.2
TRIM16-220ENST00000580388 CECR2Q9BXF3 1484 aa16.11■□□□□ 0.17
TRIM16-220ENST00000580388 PABPN1Q86U42 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
TRIM16-220ENST00000580388 RSF1Q96T23 1441 aaPredicted RBP16.1■□□□□ 0.17
TRIM16-220ENST00000580388 BICRAQ9NZM4 1560 aa16.09■□□□□ 0.17
TRIM16-220ENST00000580388 MROH2BQ7Z745 1585 aa16.02■□□□□ 0.16
TRIM16-220ENST00000580388 WIZO95785 1651 aa15.9■□□□□ 0.14
TRIM16-220ENST00000580388 BAZ1AQ9NRL2 1556 aaPredicted RBP15.89■□□□□ 0.13
TRIM16-220ENST00000580388 SMARCA4P51532 1647 aa15.86■□□□□ 0.13
TRIM16-220ENST00000580388 CHIC1Q5VXU3 224 aa15.77■□□□□ 0.12
TRIM16-220ENST00000580388 CC2D2AQ9P2K1 1620 aa15.76■□□□□ 0.11
TRIM16-220ENST00000580388 TOP2AP11388 1531 aaKnown RBP15.67■□□□□ 0.1
TRIM16-220ENST00000580388 PEG3Q9GZU2 1588 aa15.64■□□□□ 0.09
TRIM16-220ENST00000580388 SMARCA2P51531 1590 aa15.58■□□□□ 0.08
TRIM16-220ENST00000580388 ATAD2BQ9ULI0 1458 aa15.57■□□□□ 0.08
TRIM16-220ENST00000580388 EIF4G1Q04637 1599 aaKnown RBP15.55■□□□□ 0.08
TRIM16-220ENST00000580388 CCDC88BA6NC98 1476 aa15.55■□□□□ 0.08
TRIM16-220ENST00000580388 BAZ1BQ9UIG0 1483 aaKnown RBP15.44■□□□□ 0.06
TRIM16-220ENST00000580388 CUX2O14529 1486 aa15.39■□□□□ 0.05
TRIM16-220ENST00000580388 NCAPD3P42695 1498 aa15.38■□□□□ 0.05
TRIM16-220ENST00000580388 TRIM41Q8WV44 630 aa15.36■□□□□ 0.05
TRIM16-220ENST00000580388 HMGXB3Q12766 1538 aa15.35■□□□□ 0.05
TRIM16-220ENST00000580388 ABCC8Q09428 1581 aa15.29■□□□□ 0.04
TRIM16-220ENST00000580388 LOC105371045A0A1W2PR82 267 aa15.2■□□□□ 0.02
TRIM16-220ENST00000580388 FAM9AQ8IZU1 332 aaPredicted RBP15.12■□□□□ 0.01
TRIM16-220ENST00000580388 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
TRIM16-220ENST00000580388 WRNQ14191 1432 aaPredicted RBP eCLIP15.09■□□□□ 0.01
TRIM16-220ENST00000580388 ERCC6Q03468 1493 aa15.09■□□□□ 0.01
TRIM16-220ENST00000580388 CFTRP13569 1480 aa15.08■□□□□ 0
TRIM16-220ENST00000580388 PRDM2Q13029 1718 aa15.03■□□□□ -0
TRIM16-220ENST00000580388 SOGA1O94964 1423 aa15.02■□□□□ -0
TRIM16-220ENST00000580388 RUSC2Q8N2Y8 1516 aa15.02□□□□□ -0.01
TRIM16-220ENST00000580388 CADPSQ9ULU8 1353 aa14.98□□□□□ -0.01
TRIM16-220ENST00000580388 TOP2BQ02880 1626 aa14.98□□□□□ -0.01
TRIM16-220ENST00000580388 BIVM-ERCC5R4GMW8 1640 aa14.98□□□□□ -0.01
TRIM16-220ENST00000580388 CUX1P39880 1505 aa14.96□□□□□ -0.02
TRIM16-220ENST00000580388 EHMT2Q96KQ7 1210 aa14.93□□□□□ -0.02
TRIM16-220ENST00000580388 NESP48681 1621 aa14.92□□□□□ -0.02
TRIM16-220ENST00000580388 EEA1Q15075 1411 aa14.88□□□□□ -0.03
TRIM16-220ENST00000580388 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
TRIM16-220ENST00000580388 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
TRIM16-220ENST00000580388 FANCD2Q9BXW9 1451 aa14.84□□□□□ -0.03
TRIM16-220ENST00000580388 LAMC3Q9Y6N6 1575 aa14.81□□□□□ -0.04
TRIM16-220ENST00000580388 KIF21BO75037 1637 aa14.77□□□□□ -0.05
TRIM16-220ENST00000580388 FGD5Q6ZNL6 1462 aa14.74□□□□□ -0.05
TRIM16-220ENST00000580388 GOLGA3Q08378 1498 aa14.73□□□□□ -0.05
TRIM16-220ENST00000580388 DNMBPQ6XZF7 1577 aa14.73□□□□□ -0.05
TRIM16-220ENST00000580388 TNIKQ9UKE5 1360 aa14.73□□□□□ -0.05
TRIM16-220ENST00000580388 TOPBP1Q92547 1522 aa14.71□□□□□ -0.05
TRIM16-220ENST00000580388 KIF21AQ7Z4S6 1674 aa14.71□□□□□ -0.05
TRIM16-220ENST00000580388 CEP164Q9UPV0 1460 aa14.7□□□□□ -0.06
TRIM16-220ENST00000580388 URB2Q14146 1524 aaKnown RBP14.7□□□□□ -0.06
TRIM16-220ENST00000580388 RAPGEF2Q9Y4G8 1499 aa14.69□□□□□ -0.06
TRIM16-220ENST00000580388 CEP162Q5TB80 1403 aa14.67□□□□□ -0.06
TRIM16-220ENST00000580388 PRXQ9BXM0 1461 aa14.67□□□□□ -0.06
TRIM16-220ENST00000580388 KIF27Q86VH2 1401 aa14.66□□□□□ -0.06
TRIM16-220ENST00000580388 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
TRIM16-220ENST00000580388 POLA1P09884 1462 aaPredicted RBP14.64□□□□□ -0.07
TRIM16-220ENST00000580388 RAD54L2Q9Y4B4 1467 aa14.64□□□□□ -0.07
TRIM16-220ENST00000580388 UBTFP17480 764 aaKnown RBP14.64□□□□□ -0.07
TRIM16-220ENST00000580388 ERICH3Q5RHP9 1530 aa14.61□□□□□ -0.07
TRIM16-220ENST00000580388 IGF1RP08069 1367 aa14.6□□□□□ -0.07
TRIM16-220ENST00000580388 AEBP2Q6ZN18 517 aaPredicted RBP14.59□□□□□ -0.07
TRIM16-220ENST00000580388 ABCA10Q8WWZ4 1543 aa14.59□□□□□ -0.07
TRIM16-220ENST00000580388 WDR97A6NE52 1622 aa14.59□□□□□ -0.07
TRIM16-220ENST00000580388 PCGF6Q9BYE7 350 aa14.56□□□□□ -0.08
TRIM16-220ENST00000580388 RIMBP3CA6NJZ7 1639 aa14.55□□□□□ -0.08
TRIM16-220ENST00000580388 RIMBP3BA6NNM3 1639 aa14.55□□□□□ -0.08
TRIM16-220ENST00000580388 RIMBP3Q9UFD9 1639 aa14.55□□□□□ -0.08
TRIM16-220ENST00000580388 MRC2Q9UBG0 1479 aa14.51□□□□□ -0.09
TRIM16-220ENST00000580388 CLIP1P30622 1438 aa14.51□□□□□ -0.09
TRIM16-220ENST00000580388 TARBP1Q13395 1621 aaKnown RBP14.51□□□□□ -0.09
TRIM16-220ENST00000580388 ABCA5Q8WWZ7 1642 aa14.5□□□□□ -0.09
TRIM16-220ENST00000580388 PPARGC1BQ86YN6 1023 aaKnown RBP14.49□□□□□ -0.09
TRIM16-220ENST00000580388 CARMIL1Q5VZK9 1371 aa14.48□□□□□ -0.09
TRIM16-220ENST00000580388 TRIM26Q12899 539 aaPredicted RBP14.48□□□□□ -0.09
TRIM16-220ENST00000580388 TDRD9Q8NDG6 1382 aaKnown RBP14.46□□□□□ -0.1
TRIM16-220ENST00000580388 WDR62O43379 1518 aa14.46□□□□□ -0.1
TRIM16-220ENST00000580388 OSCARQ8IYS5 282 aa14.45□□□□□ -0.1
TRIM16-220ENST00000580388 RANGAP1P46060 587 aaPredicted RBP14.43□□□□□ -0.1
TRIM16-220ENST00000580388 ARAP1Q96P48 1450 aa14.43□□□□□ -0.1
TRIM16-220ENST00000580388 CUL7Q14999 1698 aa14.42□□□□□ -0.1
TRIM16-220ENST00000580388 GAPVD1Q14C86 1478 aa14.41□□□□□ -0.1
TRIM16-220ENST00000580388 VPS8Q8N3P4 1428 aa14.4□□□□□ -0.1
TRIM16-220ENST00000580388 ARHGAP35Q9NRY4 1499 aa14.38□□□□□ -0.11
TRIM16-220ENST00000580388 PBRM1Q86U86 1689 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms