RNA–Protein interactions for RNA: ENST00000554609.5

AP4S1-206, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP4S1, Length 1,012 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-206ENST00000554609 AEBP2Q6ZN18 517 aaPredicted RBP29.18■■■□□ 2.26
AP4S1-206ENST00000554609 CHIC1Q5VXU3 224 aa27.94■■■□□ 2.06
AP4S1-206ENST00000554609 NISCHQ9Y2I1 1504 aa25.15■■□□□ 1.62
AP4S1-206ENST00000554609 SENP3Q9H4L4 574 aaPredicted RBP24.75■■□□□ 1.55
AP4S1-206ENST00000554609 PHF23Q9BUL5 403 aaPredicted RBP24.57■■□□□ 1.52
AP4S1-206ENST00000554609 ABCC9O60706 1549 aa23.15■■□□□ 1.3
AP4S1-206ENST00000554609 FOXD1Q16676 465 aa23.08■■□□□ 1.29
AP4S1-206ENST00000554609 CCDC180Q9P1Z9 1646 aa22.68■■□□□ 1.22
AP4S1-206ENST00000554609 PLPPR3Q6T4P5 718 aa22.42■■□□□ 1.18
AP4S1-206ENST00000554609 DNAJC5BQ9UF47 199 aa22.21■■□□□ 1.15
AP4S1-206ENST00000554609 PPP6R1Q9UPN7 881 aa21.85■■□□□ 1.09
AP4S1-206ENST00000554609 ADRA2BP18089 450 aa21.78■■□□□ 1.08
AP4S1-206ENST00000554609 RB1CC1Q8TDY2 1594 aa21.78■■□□□ 1.08
AP4S1-206ENST00000554609 PIAS4Q8N2W9 510 aaPredicted RBP21.63■■□□□ 1.05
AP4S1-206ENST00000554609 NACADO15069 1562 aa21.54■■□□□ 1.04
AP4S1-206ENST00000554609 PABPN1Q86U42 306 aaKnown RBP eCLIP21.54■■□□□ 1.04
AP4S1-206ENST00000554609 MSH5O43196 834 aa21.42■■□□□ 1.02
AP4S1-206ENST00000554609 DCAF8L2P0C7V8 631 aa21.42■■□□□ 1.02
AP4S1-206ENST00000554609 UNC13AQ9UPW8 1703 aa21.41■■□□□ 1.02
AP4S1-206ENST00000554609 BICRAQ9NZM4 1560 aa21.27■■□□□ 1
AP4S1-206ENST00000554609 MYO15BQ96JP2 1530 aa21.09■□□□□ 0.97
AP4S1-206ENST00000554609 CC2D2AQ9P2K1 1620 aa20.89■□□□□ 0.93
AP4S1-206ENST00000554609 CECR2Q9BXF3 1484 aa20.86■□□□□ 0.93
AP4S1-206ENST00000554609 SHROOM4Q9ULL8 1493 aa20.76■□□□□ 0.91
AP4S1-206ENST00000554609 ZCCHC6Q5VYS8 1495 aaKnown RBP20.74■□□□□ 0.91
AP4S1-206ENST00000554609 EIF4G1Q04637 1599 aaKnown RBP20.72■□□□□ 0.91
AP4S1-206ENST00000554609 DCAF1Q9Y4B6 1507 aa20.7■□□□□ 0.9
AP4S1-206ENST00000554609 SCRIBQ14160 1630 aa20.69■□□□□ 0.9
AP4S1-206ENST00000554609 DNAJC5Q9H3Z4 198 aa20.58■□□□□ 0.89
AP4S1-206ENST00000554609 POTEDQ86YR6 584 aa20.46■□□□□ 0.87
AP4S1-206ENST00000554609 CUX2O14529 1486 aa20.04■□□□□ 0.8
AP4S1-206ENST00000554609 NCAPD3P42695 1498 aa19.93■□□□□ 0.78
AP4S1-206ENST00000554609 MAPK8IP2Q13387 824 aaPredicted RBP19.93■□□□□ 0.78
AP4S1-206ENST00000554609 ERCC6Q03468 1493 aa19.92■□□□□ 0.78
AP4S1-206ENST00000554609 ATAD2BQ9ULI0 1458 aa19.84■□□□□ 0.77
AP4S1-206ENST00000554609 NESP48681 1621 aa19.82■□□□□ 0.76
AP4S1-206ENST00000554609 SCAF1Q9H7N4 1312 aaKnown RBP19.81■□□□□ 0.76
AP4S1-206ENST00000554609 PPP4R3CPQ6ZMV5 832 aa19.72■□□□□ 0.75
AP4S1-206ENST00000554609 DMRT2Q9Y5R5 561 aa19.7■□□□□ 0.74
AP4S1-206ENST00000554609 HMGXB3Q12766 1538 aa19.7■□□□□ 0.74
AP4S1-206ENST00000554609 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
AP4S1-206ENST00000554609 SMARCA2P51531 1590 aa19.67■□□□□ 0.74
AP4S1-206ENST00000554609 THOC2Q8NI27 1593 aaKnown RBP19.64■□□□□ 0.73
AP4S1-206ENST00000554609 BAZ1BQ9UIG0 1483 aaKnown RBP19.56■□□□□ 0.72
AP4S1-206ENST00000554609 LAMC3Q9Y6N6 1575 aa19.51■□□□□ 0.71
AP4S1-206ENST00000554609 KIF21AQ7Z4S6 1674 aa19.51■□□□□ 0.71
AP4S1-206ENST00000554609 TRIM41Q8WV44 630 aa19.5■□□□□ 0.71
AP4S1-206ENST00000554609 PEG3Q9GZU2 1588 aa19.49■□□□□ 0.71
AP4S1-206ENST00000554609 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
AP4S1-206ENST00000554609 MROH2BQ7Z745 1585 aa19.42■□□□□ 0.7
AP4S1-206ENST00000554609 PDS5BQ9NTI5 1447 aa19.39■□□□□ 0.69
AP4S1-206ENST00000554609 CADPSQ9ULU8 1353 aa19.31■□□□□ 0.68
AP4S1-206ENST00000554609 MRC2Q9UBG0 1479 aa19.27■□□□□ 0.67
AP4S1-206ENST00000554609 CNKSR2Q8WXI2 1034 aa19.26■□□□□ 0.67
AP4S1-206ENST00000554609 WDR62O43379 1518 aa19.25■□□□□ 0.67
AP4S1-206ENST00000554609 WIZO95785 1651 aa19.17■□□□□ 0.66
AP4S1-206ENST00000554609 CEP164Q9UPV0 1460 aa19.1■□□□□ 0.65
AP4S1-206ENST00000554609 OSCARQ8IYS5 282 aa19.1■□□□□ 0.65
AP4S1-206ENST00000554609 HOXD11P31277 338 aaPredicted RBP19.09■□□□□ 0.65
AP4S1-206ENST00000554609 FANCD2Q9BXW9 1451 aa19.09■□□□□ 0.65
AP4S1-206ENST00000554609 RNF216Q9NWF9 866 aaPredicted RBP19.01■□□□□ 0.63
AP4S1-206ENST00000554609 CFTRP13569 1480 aa19.01■□□□□ 0.63
AP4S1-206ENST00000554609 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
AP4S1-206ENST00000554609 NCBP3Q53F19 620 aaKnown RBP18.99■□□□□ 0.63
AP4S1-206ENST00000554609 RIMBP3CA6NJZ7 1639 aa18.92■□□□□ 0.62
AP4S1-206ENST00000554609 RIMBP3BA6NNM3 1639 aa18.92■□□□□ 0.62
AP4S1-206ENST00000554609 RIMBP3Q9UFD9 1639 aa18.92■□□□□ 0.62
AP4S1-206ENST00000554609 DCAF8L1A6NGE4 600 aa18.86■□□□□ 0.61
AP4S1-206ENST00000554609 RSF1Q96T23 1441 aaPredicted RBP18.85■□□□□ 0.61
AP4S1-206ENST00000554609 ZNF608Q9ULD9 1512 aaPredicted RBP18.84■□□□□ 0.61
AP4S1-206ENST00000554609 TOP2AP11388 1531 aaKnown RBP18.82■□□□□ 0.6
AP4S1-206ENST00000554609 NPM3O75607 178 aaKnown RBP18.81■□□□□ 0.6
AP4S1-206ENST00000554609 ARHGEF11O15085 1522 aa18.8■□□□□ 0.6
AP4S1-206ENST00000554609 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
AP4S1-206ENST00000554609 IFT140Q96RY7 1462 aa18.73■□□□□ 0.59
AP4S1-206ENST00000554609 KCNA4P22459 653 aa18.73■□□□□ 0.59
AP4S1-206ENST00000554609 CYB5RLQ6IPT4 315 aa18.72■□□□□ 0.59
AP4S1-206ENST00000554609 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
AP4S1-206ENST00000554609 CCDC88BA6NC98 1476 aa18.67■□□□□ 0.58
AP4S1-206ENST00000554609 EIF4G3O43432 1585 aaKnown RBP18.65■□□□□ 0.58
AP4S1-206ENST00000554609 CHD1O14646 1710 aa18.62■□□□□ 0.57
AP4S1-206ENST00000554609 AQRO60306 1485 aaKnown RBP eCLIP18.61■□□□□ 0.57
AP4S1-206ENST00000554609 ARAP1Q96P48 1450 aa18.61■□□□□ 0.57
AP4S1-206ENST00000554609 TRHP20396 242 aaPredicted RBP18.6■□□□□ 0.57
AP4S1-206ENST00000554609 TARBP1Q13395 1621 aaKnown RBP18.57■□□□□ 0.56
AP4S1-206ENST00000554609 ABCC8Q09428 1581 aa18.55■□□□□ 0.56
AP4S1-206ENST00000554609 DNMBPQ6XZF7 1577 aa18.55■□□□□ 0.56
AP4S1-206ENST00000554609 FBLN2P98095 1184 aa18.52■□□□□ 0.56
AP4S1-206ENST00000554609 POLA1P09884 1462 aaPredicted RBP18.47■□□□□ 0.55
AP4S1-206ENST00000554609 RAD54L2Q9Y4B4 1467 aa18.46■□□□□ 0.55
AP4S1-206ENST00000554609 TDRD9Q8NDG6 1382 aaKnown RBP18.43■□□□□ 0.54
AP4S1-206ENST00000554609 CLASP1Q7Z460 1538 aa18.39■□□□□ 0.53
AP4S1-206ENST00000554609 SOGA1O94964 1423 aa18.38■□□□□ 0.53
AP4S1-206ENST00000554609 SNAPC4Q5SXM2 1469 aa18.36■□□□□ 0.53
AP4S1-206ENST00000554609 RNF39Q9H2S5 420 aa18.35■□□□□ 0.53
AP4S1-206ENST00000554609 CHMP7Q8WUX9 453 aaPredicted RBP18.3■□□□□ 0.52
AP4S1-206ENST00000554609 FGD5Q6ZNL6 1462 aa18.3■□□□□ 0.52
AP4S1-206ENST00000554609 SYNJ1O43426 1573 aa18.27■□□□□ 0.52
AP4S1-206ENST00000554609 CUX1P39880 1505 aa18.25■□□□□ 0.51
AP4S1-206ENST00000554609 MAGI1Q96QZ7 1491 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms