RNA–Protein interactions for RNA: ENST00000216366.8

AP4S1-201, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

TSL 1 (best) BASIC

Gene AP4S1, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-201ENST00000216366 NISCHQ9Y2I1 1504 aa22.94■■□□□ 1.26
AP4S1-201ENST00000216366 SHROOM4Q9ULL8 1493 aa19.65■□□□□ 0.74
AP4S1-201ENST00000216366 ZCCHC6Q5VYS8 1495 aaKnown RBP19.47■□□□□ 0.71
AP4S1-201ENST00000216366 SUPT5HO00267 1087 aaKnown RBP19.4■□□□□ 0.7
AP4S1-201ENST00000216366 CCDC180Q9P1Z9 1646 aa19.38■□□□□ 0.69
AP4S1-201ENST00000216366 MYO15BQ96JP2 1530 aa19.11■□□□□ 0.65
AP4S1-201ENST00000216366 CHIC1Q5VXU3 224 aa19.09■□□□□ 0.65
AP4S1-201ENST00000216366 HRCP23327 699 aa18.98■□□□□ 0.63
AP4S1-201ENST00000216366 DCAF1Q9Y4B6 1507 aa18.86■□□□□ 0.61
AP4S1-201ENST00000216366 DCAF8L2P0C7V8 631 aa18.79■□□□□ 0.6
AP4S1-201ENST00000216366 PCGF6Q9BYE7 350 aa18.72■□□□□ 0.59
AP4S1-201ENST00000216366 AEBP2Q6ZN18 517 aaPredicted RBP18.56■□□□□ 0.56
AP4S1-201ENST00000216366 LOC105371045A0A1W2PR82 267 aa18.49■□□□□ 0.55
AP4S1-201ENST00000216366 PPARGC1BQ86YN6 1023 aaKnown RBP18.49■□□□□ 0.55
AP4S1-201ENST00000216366 ABCC9O60706 1549 aa18.42■□□□□ 0.54
AP4S1-201ENST00000216366 TRIM26Q12899 539 aaPredicted RBP18.34■□□□□ 0.53
AP4S1-201ENST00000216366 RSF1Q96T23 1441 aaPredicted RBP18.26■□□□□ 0.51
AP4S1-201ENST00000216366 SCRIBQ14160 1630 aa18.15■□□□□ 0.5
AP4S1-201ENST00000216366 RB1CC1Q8TDY2 1594 aa18.11■□□□□ 0.49
AP4S1-201ENST00000216366 TRIM41Q8WV44 630 aa18.08■□□□□ 0.48
AP4S1-201ENST00000216366 ZEB1P37275 1124 aaPredicted RBP18.07■□□□□ 0.48
AP4S1-201ENST00000216366 FAM9AQ8IZU1 332 aaPredicted RBP17.9■□□□□ 0.46
AP4S1-201ENST00000216366 CECR2Q9BXF3 1484 aa17.87■□□□□ 0.45
AP4S1-201ENST00000216366 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
AP4S1-201ENST00000216366 NACADO15069 1562 aa17.84■□□□□ 0.45
AP4S1-201ENST00000216366 WIZO95785 1651 aa17.75■□□□□ 0.43
AP4S1-201ENST00000216366 EIF4G1Q04637 1599 aaKnown RBP17.7■□□□□ 0.42
AP4S1-201ENST00000216366 EHMT2Q96KQ7 1210 aa17.69■□□□□ 0.42
AP4S1-201ENST00000216366 BAZ1AQ9NRL2 1556 aaPredicted RBP17.68■□□□□ 0.42
AP4S1-201ENST00000216366 SCAF1Q9H7N4 1312 aaKnown RBP17.65■□□□□ 0.42
AP4S1-201ENST00000216366 PELP1Q8IZL8 1130 aaKnown RBP17.63■□□□□ 0.41
AP4S1-201ENST00000216366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.51■□□□□ 0.39
AP4S1-201ENST00000216366 WRNQ14191 1432 aaPredicted RBP eCLIP17.51■□□□□ 0.39
AP4S1-201ENST00000216366 TOP2AP11388 1531 aaKnown RBP17.49■□□□□ 0.39
AP4S1-201ENST00000216366 CCER1Q8TC90 406 aaPredicted RBP17.47■□□□□ 0.39
AP4S1-201ENST00000216366 CCDC88BA6NC98 1476 aa17.45■□□□□ 0.38
AP4S1-201ENST00000216366 ABCC8Q09428 1581 aa17.44■□□□□ 0.38
AP4S1-201ENST00000216366 SMARCA2P51531 1590 aa17.41■□□□□ 0.38
AP4S1-201ENST00000216366 SMARCA4P51532 1647 aa17.4■□□□□ 0.38
AP4S1-201ENST00000216366 ACIN1Q9UKV3 1341 aaKnown RBP17.4■□□□□ 0.38
AP4S1-201ENST00000216366 CEP162Q5TB80 1403 aa17.39■□□□□ 0.37
AP4S1-201ENST00000216366 TNIKQ9UKE5 1360 aa17.37■□□□□ 0.37
AP4S1-201ENST00000216366 SOGA1O94964 1423 aa17.35■□□□□ 0.37
AP4S1-201ENST00000216366 NEUROD1Q13562 356 aa17.33■□□□□ 0.37
AP4S1-201ENST00000216366 EEA1Q15075 1411 aa17.33■□□□□ 0.36
AP4S1-201ENST00000216366 DIEXFQ68CQ4 756 aaKnown RBP17.32■□□□□ 0.36
AP4S1-201ENST00000216366 CSRNP3Q8WYN3 585 aa17.26■□□□□ 0.35
AP4S1-201ENST00000216366 RUSC2Q8N2Y8 1516 aa17.25■□□□□ 0.35
AP4S1-201ENST00000216366 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
AP4S1-201ENST00000216366 CENPBP07199 599 aaPredicted RBP17.21■□□□□ 0.34
AP4S1-201ENST00000216366 TTBK1Q5TCY1 1321 aaPredicted RBP17.2■□□□□ 0.34
AP4S1-201ENST00000216366 GOLGA3Q08378 1498 aa17.2■□□□□ 0.34
AP4S1-201ENST00000216366 GTF3C3Q9Y5Q9 886 aa17.17■□□□□ 0.34
AP4S1-201ENST00000216366 UBTFP17480 764 aaKnown RBP17.16■□□□□ 0.34
AP4S1-201ENST00000216366 ZNF316A6NFI3 1004 aaPredicted RBP17.14■□□□□ 0.33
AP4S1-201ENST00000216366 PEG3Q9GZU2 1588 aa17.1■□□□□ 0.33
AP4S1-201ENST00000216366 KIF21BO75037 1637 aa17.08■□□□□ 0.33
AP4S1-201ENST00000216366 CEP164Q9UPV0 1460 aa17.08■□□□□ 0.33
AP4S1-201ENST00000216366 SYNJ1O43426 1573 aa17.05■□□□□ 0.32
AP4S1-201ENST00000216366 BICRAQ9NZM4 1560 aa17.04■□□□□ 0.32
AP4S1-201ENST00000216366 CLIP1P30622 1438 aa17■□□□□ 0.31
AP4S1-201ENST00000216366 VPS8Q8N3P4 1428 aa16.99■□□□□ 0.31
AP4S1-201ENST00000216366 BAZ1BQ9UIG0 1483 aaKnown RBP16.98■□□□□ 0.31
AP4S1-201ENST00000216366 HNRNPUL2Q1KMD3 747 aaKnown RBP16.94■□□□□ 0.3
AP4S1-201ENST00000216366 MIER1Q8N108 512 aa16.92■□□□□ 0.3
AP4S1-201ENST00000216366 PABPN1Q86U42 306 aaKnown RBP eCLIP16.91■□□□□ 0.3
AP4S1-201ENST00000216366 RAPGEF2Q9Y4G8 1499 aa16.91■□□□□ 0.3
AP4S1-201ENST00000216366 ATAD2BQ9ULI0 1458 aa16.89■□□□□ 0.29
AP4S1-201ENST00000216366 YTHDC1Q96MU7 727 aaKnown RBP16.86■□□□□ 0.29
AP4S1-201ENST00000216366 TOP2BQ02880 1626 aa16.82■□□□□ 0.28
AP4S1-201ENST00000216366 APLP2Q06481 763 aa16.82■□□□□ 0.28
AP4S1-201ENST00000216366 MYT1Q01538 1121 aa16.81■□□□□ 0.28
AP4S1-201ENST00000216366 CLSPNQ9HAW4 1339 aa16.8■□□□□ 0.28
AP4S1-201ENST00000216366 BIVM-ERCC5R4GMW8 1640 aa16.77■□□□□ 0.27
AP4S1-201ENST00000216366 ERICH3Q5RHP9 1530 aa16.77■□□□□ 0.27
AP4S1-201ENST00000216366 DHX57Q6P158 1386 aaKnown RBP16.75■□□□□ 0.27
AP4S1-201ENST00000216366 PRXQ9BXM0 1461 aa16.75■□□□□ 0.27
AP4S1-201ENST00000216366 ARAP1Q96P48 1450 aa16.73■□□□□ 0.27
AP4S1-201ENST00000216366 RANGAP1P46060 587 aaPredicted RBP16.68■□□□□ 0.26
AP4S1-201ENST00000216366 RRBP1Q9P2E9 1410 aaKnown RBP16.66■□□□□ 0.26
AP4S1-201ENST00000216366 KANK4Q5T7N3 995 aaPredicted RBP16.65■□□□□ 0.26
AP4S1-201ENST00000216366 CUX2O14529 1486 aa16.64■□□□□ 0.25
AP4S1-201ENST00000216366 CUX1P39880 1505 aa16.59■□□□□ 0.25
AP4S1-201ENST00000216366 KIF27Q86VH2 1401 aa16.55■□□□□ 0.24
AP4S1-201ENST00000216366 HMGXB3Q12766 1538 aa16.55■□□□□ 0.24
AP4S1-201ENST00000216366 ARHGAP35Q9NRY4 1499 aa16.54■□□□□ 0.24
AP4S1-201ENST00000216366 CCNB3Q8WWL7 1395 aa16.53■□□□□ 0.24
AP4S1-201ENST00000216366 NCAPD3P42695 1498 aa16.53■□□□□ 0.24
AP4S1-201ENST00000216366 SUPT16HQ9Y5B9 1047 aaKnown RBP16.5■□□□□ 0.23
AP4S1-201ENST00000216366 CFTRP13569 1480 aa16.47■□□□□ 0.23
AP4S1-201ENST00000216366 MAPKBP1O60336 1514 aa16.44■□□□□ 0.22
AP4S1-201ENST00000216366 MAP3K1Q13233 1512 aa16.44■□□□□ 0.22
AP4S1-201ENST00000216366 RAB3GAP2Q9H2M9 1393 aa16.42■□□□□ 0.22
AP4S1-201ENST00000216366 TIAM1Q13009 1591 aa16.41■□□□□ 0.22
AP4S1-201ENST00000216366 IGF1RP08069 1367 aa16.38■□□□□ 0.21
AP4S1-201ENST00000216366 ITGAEP38570 1179 aa16.35■□□□□ 0.21
AP4S1-201ENST00000216366 SETD5Q9C0A6 1442 aa16.35■□□□□ 0.21
AP4S1-201ENST00000216366 LRRC9Q6ZRR7 1453 aa16.34■□□□□ 0.21
AP4S1-201ENST00000216366 PRDM2Q13029 1718 aa16.34■□□□□ 0.21
AP4S1-201ENST00000216366 KCNH8Q96L42 1107 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms