Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.91■■□□□ 1.422e-7■■■□□ 14.8
EIF3DO15371 CALM1-207ENST00000553964 2670 ntTSL 1 (best)20.84■□□□□ 0.932e-7■■■□□ 14.8
EIF3DO15371 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.282e-7■■■□□ 14.8
EIF3DO15371 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.12■□□□□ 0.012e-7■■■□□ 14.8
EIF3DO15371 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.132e-7■■■□□ 14.8
EIF3DO15371 PRPF8-214ENST00000576585 2157 ntTSL 213.71□□□□□ -0.222e-7■■■□□ 14.8
EIF3DO15371 PRPF8-212ENST00000575116 460 ntTSL 313.14□□□□□ -0.312e-7■■■□□ 14.8
EIF3DO15371 RNF213-202ENST00000411702 6428 ntTSL 212.47□□□□□ -0.413e-6■■■□□ 14.8
EIF3DO15371 PRPF8-201ENST00000304992 7295 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.712e-7■■■□□ 14.8
EIF3DO15371 STAT1-204ENST00000409465 3097 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.732e-7■■■□□ 14.8
EIF3DO15371 CALM1-211ENST00000555267 554 ntTSL 23.82□□□□□ -1.82e-7■■■□□ 14.8
EIF3DO15371 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.39e-8■■■□□ 14.7
EIF3DO15371 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.539e-8■■■□□ 14.7
EIF3DO15371 ATRX-206ENST00000480283 10455 ntTSL 1 (best)4.57□□□□□ -1.689e-8■■■□□ 14.7
EIF3DO15371 ATRX-204ENST00000460639 461 ntTSL 34.55□□□□□ -1.689e-8■■■□□ 14.7
EIF3DO15371 ATRX-209ENST00000623242 725 ntTSL 34.26□□□□□ -1.739e-8■■■□□ 14.7
EIF3DO15371 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.111e-6■■■□□ 14.7
EIF3DO15371 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.111e-6■■■□□ 14.7
EIF3DO15371 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.57■□□□□ 0.081e-6■■■□□ 14.7
EIF3DO15371 SEPT9-215ENST00000586521 601 ntTSL 419.29■□□□□ 0.681e-6■■■□□ 14.6
EIF3DO15371 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.291e-6■■□□□ 14.5
EIF3DO15371 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.18e-7■■□□□ 14.5
EIF3DO15371 PPP1CB-208ENST00000455580 721 ntTSL 325.91■■□□□ 1.747e-17■■□□□ 14.5
EIF3DO15371 PPP1CB-205ENST00000420282 570 ntTSL 422.4■■□□□ 1.187e-17■■□□□ 14.5
EIF3DO15371 PPP1CB-206ENST00000427786 569 ntTSL 421.2■□□□□ 0.987e-17■■□□□ 14.5
EIF3DO15371 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.447e-17■■□□□ 14.5
EIF3DO15371 PPP1CB-207ENST00000441461 584 ntTSL 216.29■□□□□ 0.27e-17■■□□□ 14.5
EIF3DO15371 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.127e-17■■□□□ 14.5
EIF3DO15371 PPP1CB-209ENST00000464273 577 ntTSL 215.62■□□□□ 0.097e-17■■□□□ 14.5
EIF3DO15371 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.097e-17■■□□□ 14.5
EIF3DO15371 SEPT9-245ENST00000592481 1291 ntTSL 522.89■■□□□ 1.251e-6■■□□□ 14.5
EIF3DO15371 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.81e-6■■□□□ 14.5
EIF3DO15371 SEPT9-221ENST00000588958 879 ntTSL 217.94■□□□□ 0.461e-6■■□□□ 14.5
EIF3DO15371 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.161e-6■■□□□ 14.5
EIF3DO15371 SEPT9-212ENST00000586128 752 ntTSL 415.32■□□□□ 0.041e-6■■□□□ 14.5
EIF3DO15371 SEPT9-239ENST00000591704 749 ntTSL 212.7□□□□□ -0.381e-6■■□□□ 14.5
EIF3DO15371 HERC2-207ENST00000564734 3121 ntTSL 1 (best)16.69■□□□□ 0.263e-7■■□□□ 14.4
EIF3DO15371 AC138969.1-203ENST00000537112 4514 ntTSL 513.57□□□□□ -0.242e-7■■□□□ 14.4
EIF3DO15371 PIEZO1-203ENST00000419505 1635 ntTSL 1 (best)21.94■■□□□ 1.13e-6■■□□□ 14.4
EIF3DO15371 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.09■□□□□ 0.813e-6■■□□□ 14.4
EIF3DO15371 PIEZO1-208ENST00000484567 2464 ntTSL 219.52■□□□□ 0.723e-6■■□□□ 14.4
EIF3DO15371 PIEZO1-205ENST00000472168 663 ntTSL 216.48■□□□□ 0.233e-6■■□□□ 14.4
EIF3DO15371 PIEZO1-213ENST00000518793 660 ntTSL 312.74□□□□□ -0.373e-6■■□□□ 14.4
EIF3DO15371 RPH3AL-205ENST00000570893 594 ntTSL 317.82■□□□□ 0.442e-6■■□□□ 14.4
EIF3DO15371 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC14.25□□□□□ -0.132e-8■■□□□ 14.4
EIF3DO15371 EIF4G1-221ENST00000441154 4311 ntTSL 5 BASIC11.73□□□□□ -0.532e-8■■□□□ 14.4
EIF3DO15371 TRIO-222ENST00000515144 7455 ntTSL 1 (best)15.02□□□□□ -0.015e-7■■□□□ 14.4
EIF3DO15371 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.585e-6■■□□□ 14.4
EIF3DO15371 C7orf50-208ENST00000491163 621 ntAPPRIS ALT2 TSL 321.74■■□□□ 1.075e-6■■□□□ 14.4
EIF3DO15371 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.985e-6■■□□□ 14.4
EIF3DO15371 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.76■□□□□ 0.915e-6■■□□□ 14.4
EIF3DO15371 C7orf50-207ENST00000488073 853 ntTSL 519.42■□□□□ 0.75e-6■■□□□ 14.4
EIF3DO15371 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.49■□□□□ 0.715e-12■■□□□ 14.4
EIF3DO15371 DANCR-202ENST00000425653 823 ntTSL 1 (best)18.22■□□□□ 0.515e-12■■□□□ 14.4
EIF3DO15371 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC9.8□□□□□ -0.842e-6■■□□□ 14.4
EIF3DO15371 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.382e-39■■□□□ 14.4
EIF3DO15371 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.04□□□□□ -1.442e-39■■□□□ 14.4
EIF3DO15371 AHNAK-208ENST00000533365 584 ntAPPRIS ALT2 TSL 521.28■■□□□ 12e-7■■□□□ 14.3
EIF3DO15371 AHNAK-207ENST00000531324 579 ntAPPRIS ALT2 TSL 320.41■□□□□ 0.862e-7■■□□□ 14.3
EIF3DO15371 POLR3E-217ENST00000569757 662 ntTSL 418.01■□□□□ 0.472e-7■■□□□ 14.3
EIF3DO15371 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.282e-7■■□□□ 14.3
EIF3DO15371 POLR3E-215ENST00000565551 645 ntTSL 516.51■□□□□ 0.232e-7■■□□□ 14.3
EIF3DO15371 PDIA3-202ENST00000434494 2107 ntTSL 216.06■□□□□ 0.162e-7■■□□□ 14.3
EIF3DO15371 AHNAK-206ENST00000530285 580 ntAPPRIS ALT2 TSL 315.21■□□□□ 0.032e-7■■□□□ 14.3
EIF3DO15371 AHNAK-204ENST00000528508 568 ntAPPRIS ALT2 TSL 414.22□□□□□ -0.132e-7■■□□□ 14.3
EIF3DO15371 PDIA3-201ENST00000300289 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.52e-7■■□□□ 14.3
EIF3DO15371 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.652e-7■■□□□ 14.3
EIF3DO15371 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.812e-7■■□□□ 14.3
EIF3DO15371 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.92e-7■■□□□ 14.3
EIF3DO15371 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.542e-7■■□□□ 14.3
EIF3DO15371 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.552e-7■■□□□ 14.3
EIF3DO15371 PDIA3-206ENST00000497349 739 ntTSL 24.99□□□□□ -1.612e-7■■□□□ 14.3
EIF3DO15371 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.65□□□□□ -1.832e-7■■□□□ 14.3
EIF3DO15371 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.932e-7■■□□□ 14.3
EIF3DO15371 UHRF1-202ENST00000613817 1859 ntTSL 223.48■■□□□ 1.353e-6■■□□□ 14.3
EIF3DO15371 TJP2-205ENST00000423935 614 ntTSL 220.71■□□□□ 0.913e-7■■□□□ 14.3
EIF3DO15371 PRPF40A-212ENST00000545856 1358 ntTSL 1 (best)17.71■□□□□ 0.433e-7■■□□□ 14.3
EIF3DO15371 HELLS-207ENST00000419900 711 ntTSL 317.67■□□□□ 0.422e-10■■□□□ 14.3
EIF3DO15371 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.092e-10■■□□□ 14.3
EIF3DO15371 NASP-208ENST00000470768 1036 ntTSL 315.55■□□□□ 0.081e-9■■□□□ 14.3
EIF3DO15371 PRPF40A-201ENST00000354363 1622 ntTSL 215.48■□□□□ 0.073e-7■■□□□ 14.3
EIF3DO15371 NASP-207ENST00000464190 604 ntTSL 215.1■□□□□ 0.011e-9■■□□□ 14.3
EIF3DO15371 PRPF40A-211ENST00000493468 1043 ntTSL 1 (best)14.99□□□□□ -0.013e-7■■□□□ 14.3
EIF3DO15371 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.97□□□□□ -0.012e-10■■□□□ 14.3
EIF3DO15371 TJP2-210ENST00000606364 591 ntTSL 413□□□□□ -0.333e-7■■□□□ 14.3
EIF3DO15371 NASP-219ENST00000530840 531 ntTSL 512.9□□□□□ -0.341e-9■■□□□ 14.3
EIF3DO15371 NASP-212ENST00000527359 743 ntTSL 312.83□□□□□ -0.361e-9■■□□□ 14.3
EIF3DO15371 NASP-211ENST00000525515 565 ntTSL 512.83□□□□□ -0.361e-9■■□□□ 14.3
EIF3DO15371 NASP-220ENST00000531532 554 ntTSL 412.81□□□□□ -0.361e-9■■□□□ 14.3
EIF3DO15371 NASP-217ENST00000529333 778 ntTSL 412.79□□□□□ -0.361e-9■■□□□ 14.3
EIF3DO15371 NASP-213ENST00000527470 532 ntTSL 412.79□□□□□ -0.361e-9■■□□□ 14.3
EIF3DO15371 NASP-205ENST00000437901 874 ntTSL 512.75□□□□□ -0.371e-9■■□□□ 14.3
EIF3DO15371 NASP-204ENST00000437362 999 ntTSL 212.66□□□□□ -0.381e-9■■□□□ 14.3
EIF3DO15371 NASP-225ENST00000629893 253 ntTSL 5 BASIC12.64□□□□□ -0.391e-9■■□□□ 14.3
EIF3DO15371 NASP-215ENST00000528084 535 ntTSL 412.64□□□□□ -0.391e-9■■□□□ 14.3
EIF3DO15371 UHRF1-207ENST00000624301 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.433e-6■■□□□ 14.3
EIF3DO15371 UHRF1-205ENST00000620565 3965 ntTSL 1 (best) BASIC11.94□□□□□ -0.53e-6■■□□□ 14.3
EIF3DO15371 UHRF1-201ENST00000612630 4309 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.513e-6■■□□□ 14.3
EIF3DO15371 NASP-206ENST00000453748 2080 ntTSL 211.07□□□□□ -0.641e-9■■□□□ 14.3
EIF3DO15371 NASP-202ENST00000351223 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.641e-9■■□□□ 14.3
Retrieved 100 of 4,069 protein–RNA pairs in 190.6 ms