RNA–Protein interactions for RNA: ENST00000395366.2

PPP1CB-203, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 4,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-203ENST00000395366 NISCHQ9Y2I1 1504 aa27.86■■■□□ 2.05
PPP1CB-203ENST00000395366 DCAF8L2P0C7V8 631 aa26.29■■□□□ 1.8
PPP1CB-203ENST00000395366 SHROOM4Q9ULL8 1493 aa25.27■■□□□ 1.64
PPP1CB-203ENST00000395366 SUPT5HO00267 1087 aaKnown RBP25.19■■□□□ 1.62
PPP1CB-203ENST00000395366 EHMT2Q96KQ7 1210 aa23.76■■□□□ 1.39
PPP1CB-203ENST00000395366 FAM9AQ8IZU1 332 aaPredicted RBP23.55■■□□□ 1.36
PPP1CB-203ENST00000395366 TRIM41Q8WV44 630 aa23.43■■□□□ 1.34
PPP1CB-203ENST00000395366 ABCC9O60706 1549 aa23.41■■□□□ 1.34
PPP1CB-203ENST00000395366 CCDC180Q9P1Z9 1646 aa23.26■■□□□ 1.31
PPP1CB-203ENST00000395366 ZCCHC6Q5VYS8 1495 aaKnown RBP23.22■■□□□ 1.31
PPP1CB-203ENST00000395366 CHIC1Q5VXU3 224 aa23.15■■□□□ 1.3
PPP1CB-203ENST00000395366 PCGF6Q9BYE7 350 aa23.12■■□□□ 1.29
PPP1CB-203ENST00000395366 PELP1Q8IZL8 1130 aaKnown RBP23.03■■□□□ 1.28
PPP1CB-203ENST00000395366 APLP2Q06481 763 aa23.01■■□□□ 1.27
PPP1CB-203ENST00000395366 TTBK1Q5TCY1 1321 aaPredicted RBP22.89■■□□□ 1.26
PPP1CB-203ENST00000395366 MYT1Q01538 1121 aa22.88■■□□□ 1.25
PPP1CB-203ENST00000395366 PABPN1Q86U42 306 aaKnown RBP eCLIP22.86■■□□□ 1.25
PPP1CB-203ENST00000395366 UBTFP17480 764 aaKnown RBP22.83■■□□□ 1.25
PPP1CB-203ENST00000395366 RANGAP1P46060 587 aaPredicted RBP22.81■■□□□ 1.24
PPP1CB-203ENST00000395366 LOC105371045A0A1W2PR82 267 aa22.8■■□□□ 1.24
PPP1CB-203ENST00000395366 SCRIBQ14160 1630 aa22.69■■□□□ 1.22
PPP1CB-203ENST00000395366 PPARGC1BQ86YN6 1023 aaKnown RBP22.51■■□□□ 1.19
PPP1CB-203ENST00000395366 TRIM26Q12899 539 aaPredicted RBP22.47■■□□□ 1.19
PPP1CB-203ENST00000395366 ZEB1P37275 1124 aaPredicted RBP22.43■■□□□ 1.18
PPP1CB-203ENST00000395366 CCER1Q8TC90 406 aaPredicted RBP22.41■■□□□ 1.18
PPP1CB-203ENST00000395366 ATP1B4Q9UN42 357 aaPredicted RBP22.4■■□□□ 1.18
PPP1CB-203ENST00000395366 DCAF1Q9Y4B6 1507 aa22.34■■□□□ 1.17
PPP1CB-203ENST00000395366 NACADO15069 1562 aa22.26■■□□□ 1.15
PPP1CB-203ENST00000395366 RB1CC1Q8TDY2 1594 aa22.26■■□□□ 1.15
PPP1CB-203ENST00000395366 HRCP23327 699 aa22.18■■□□□ 1.14
PPP1CB-203ENST00000395366 RSF1Q96T23 1441 aaPredicted RBP22.14■■□□□ 1.13
PPP1CB-203ENST00000395366 CSRNP3Q8WYN3 585 aa21.94■■□□□ 1.1
PPP1CB-203ENST00000395366 HNRNPUL2Q1KMD3 747 aaKnown RBP21.91■■□□□ 1.1
PPP1CB-203ENST00000395366 ITGAEP38570 1179 aa21.87■■□□□ 1.09
PPP1CB-203ENST00000395366 CECR2Q9BXF3 1484 aa21.84■■□□□ 1.09
PPP1CB-203ENST00000395366 MYO15BQ96JP2 1530 aa21.79■■□□□ 1.08
PPP1CB-203ENST00000395366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.77■■□□□ 1.08
PPP1CB-203ENST00000395366 BAZ1AQ9NRL2 1556 aaPredicted RBP21.73■■□□□ 1.07
PPP1CB-203ENST00000395366 CENPBP07199 599 aaPredicted RBP21.69■■□□□ 1.06
PPP1CB-203ENST00000395366 MROH2BQ7Z745 1585 aa21.61■■□□□ 1.05
PPP1CB-203ENST00000395366 BAZ1BQ9UIG0 1483 aaKnown RBP21.57■■□□□ 1.04
PPP1CB-203ENST00000395366 FAM50AQ14320 339 aaKnown RBP21.5■■□□□ 1.03
PPP1CB-203ENST00000395366 YTHDC1Q96MU7 727 aaKnown RBP21.46■■□□□ 1.03
PPP1CB-203ENST00000395366 P3H3Q8IVL6 736 aa21.46■■□□□ 1.03
PPP1CB-203ENST00000395366 WRNQ14191 1432 aaPredicted RBP eCLIP21.45■■□□□ 1.02
PPP1CB-203ENST00000395366 EEA1Q15075 1411 aa21.38■■□□□ 1.01
PPP1CB-203ENST00000395366 FBLN2P98095 1184 aa21.37■■□□□ 1.01
PPP1CB-203ENST00000395366 CCDC88BA6NC98 1476 aa21.33■■□□□ 1
PPP1CB-203ENST00000395366 WIZO95785 1651 aa21.33■■□□□ 1
PPP1CB-203ENST00000395366 DIEXFQ68CQ4 756 aaKnown RBP21.26■□□□□ 0.99
PPP1CB-203ENST00000395366 GOLGA3Q08378 1498 aa21.25■□□□□ 0.99
PPP1CB-203ENST00000395366 CLIP1P30622 1438 aa21.25■□□□□ 0.99
PPP1CB-203ENST00000395366 CEP162Q5TB80 1403 aa21.24■□□□□ 0.99
PPP1CB-203ENST00000395366 MYT1LQ9UL68 1186 aa21.22■□□□□ 0.99
PPP1CB-203ENST00000395366 TOP2AP11388 1531 aaKnown RBP21.2■□□□□ 0.98
PPP1CB-203ENST00000395366 ARID3CA6NKF2 412 aa21.18■□□□□ 0.98
PPP1CB-203ENST00000395366 SMARCA2P51531 1590 aa21.18■□□□□ 0.98
PPP1CB-203ENST00000395366 TNIKQ9UKE5 1360 aa21.17■□□□□ 0.98
PPP1CB-203ENST00000395366 TRIM52Q96A61 297 aa21.16■□□□□ 0.98
PPP1CB-203ENST00000395366 NEUROD1Q13562 356 aa21.16■□□□□ 0.98
PPP1CB-203ENST00000395366 SOGA1O94964 1423 aa21.15■□□□□ 0.98
PPP1CB-203ENST00000395366 ABCC8Q09428 1581 aa21.15■□□□□ 0.98
PPP1CB-203ENST00000395366 SMARCA4P51532 1647 aa21.13■□□□□ 0.97
PPP1CB-203ENST00000395366 CEP164Q9UPV0 1460 aa21.12■□□□□ 0.97
PPP1CB-203ENST00000395366 KIF27Q86VH2 1401 aa21.12■□□□□ 0.97
PPP1CB-203ENST00000395366 POLR3GLQ9BT43 218 aa21.06■□□□□ 0.96
PPP1CB-203ENST00000395366 ERICH6Q7L0X2 663 aa21.04■□□□□ 0.96
PPP1CB-203ENST00000395366 ATAD2BQ9ULI0 1458 aa21.04■□□□□ 0.96
PPP1CB-203ENST00000395366 ZNF316A6NFI3 1004 aaPredicted RBP21.02■□□□□ 0.96
PPP1CB-203ENST00000395366 NEFLP07196 543 aa21.02■□□□□ 0.96
PPP1CB-203ENST00000395366 CDK11AQ9UQ88 783 aaPredicted RBP20.98■□□□□ 0.95
PPP1CB-203ENST00000395366 ZNF777Q9ULD5 760 aaPredicted RBP20.89■□□□□ 0.93
PPP1CB-203ENST00000395366 CNGB1Q14028 1251 aaPredicted RBP20.88■□□□□ 0.93
PPP1CB-203ENST00000395366 CUX2O14529 1486 aa20.88■□□□□ 0.93
PPP1CB-203ENST00000395366 CHMP7Q8WUX9 453 aaPredicted RBP20.86■□□□□ 0.93
PPP1CB-203ENST00000395366 MTUS2Q5JR59 1369 aa20.86■□□□□ 0.93
PPP1CB-203ENST00000395366 CARMIL1Q5VZK9 1371 aa20.82■□□□□ 0.92
PPP1CB-203ENST00000395366 CADPSQ9ULU8 1353 aa20.78■□□□□ 0.92
PPP1CB-203ENST00000395366 ZNF326Q5BKZ1 582 aaKnown RBP20.78■□□□□ 0.92
PPP1CB-203ENST00000395366 CHIC2Q9UKJ5 165 aa20.74■□□□□ 0.91
PPP1CB-203ENST00000395366 VPS8Q8N3P4 1428 aa20.69■□□□□ 0.9
PPP1CB-203ENST00000395366 RUSC2Q8N2Y8 1516 aa20.69■□□□□ 0.9
PPP1CB-203ENST00000395366 ANP32CO43423 234 aa20.67■□□□□ 0.9
PPP1CB-203ENST00000395366 TONSLQ96HA7 1378 aa20.67■□□□□ 0.9
PPP1CB-203ENST00000395366 ERCC6Q03468 1493 aa20.67■□□□□ 0.9
PPP1CB-203ENST00000395366 PDS5BQ9NTI5 1447 aa20.67■□□□□ 0.9
PPP1CB-203ENST00000395366 NCAPD3P42695 1498 aa20.61■□□□□ 0.89
PPP1CB-203ENST00000395366 FHAD1B1AJZ9 1412 aa20.61■□□□□ 0.89
PPP1CB-203ENST00000395366 RAPGEF2Q9Y4G8 1499 aa20.6■□□□□ 0.89
PPP1CB-203ENST00000395366 TDRD9Q8NDG6 1382 aaKnown RBP20.59■□□□□ 0.89
PPP1CB-203ENST00000395366 EIF4G1Q04637 1599 aaKnown RBP20.58■□□□□ 0.89
PPP1CB-203ENST00000395366 GTF3C3Q9Y5Q9 886 aa20.55■□□□□ 0.88
PPP1CB-203ENST00000395366 RRP7BPQ9NSQ0 103 aa20.55■□□□□ 0.88
PPP1CB-203ENST00000395366 KANK4Q5T7N3 995 aaPredicted RBP20.53■□□□□ 0.88
PPP1CB-203ENST00000395366 CCNB3Q8WWL7 1395 aa20.52■□□□□ 0.88
PPP1CB-203ENST00000395366 TSPY4P0CV99 314 aa20.52■□□□□ 0.87
PPP1CB-203ENST00000395366 TSPY10P0CW01 314 aa20.52■□□□□ 0.87
PPP1CB-203ENST00000395366 SLC4A1APQ9BWU0 796 aaKnown RBP20.5■□□□□ 0.87
PPP1CB-203ENST00000395366 ACIN1Q9UKV3 1341 aaKnown RBP20.5■□□□□ 0.87
PPP1CB-203ENST00000395366 FANCD2Q9BXW9 1451 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms