RNA–Protein interactions for RNA: ENST00000395603.7

ATRX-202, Transcript of ATRX, chromatin remodeler, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATRX, Length 10,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-202ENST00000395603 NISCHQ9Y2I1 1504 aa8.98□□□□□ -0.97
ATRX-202ENST00000395603 MYT1Q01538 1121 aa8.8□□□□□ -1
ATRX-202ENST00000395603 PELP1Q8IZL8 1130 aaKnown RBP8.68□□□□□ -1.02
ATRX-202ENST00000395603 ZEB1P37275 1124 aaPredicted RBP8.38□□□□□ -1.07
ATRX-202ENST00000395603 ACIN1Q9UKV3 1341 aaKnown RBP8.35□□□□□ -1.07
ATRX-202ENST00000395603 FAM9AQ8IZU1 332 aaPredicted RBP8.34□□□□□ -1.07
ATRX-202ENST00000395603 TTBK1Q5TCY1 1321 aaPredicted RBP8.26□□□□□ -1.09
ATRX-202ENST00000395603 SHROOM4Q9ULL8 1493 aa8.2□□□□□ -1.1
ATRX-202ENST00000395603 YTHDC1Q96MU7 727 aaKnown RBP8.19□□□□□ -1.1
ATRX-202ENST00000395603 CCDC180Q9P1Z9 1646 aa8.18□□□□□ -1.1
ATRX-202ENST00000395603 CCER1Q8TC90 406 aaPredicted RBP8.18□□□□□ -1.1
ATRX-202ENST00000395603 CLSPNQ9HAW4 1339 aa8.17□□□□□ -1.1
ATRX-202ENST00000395603 DCAF1Q9Y4B6 1507 aa7.98□□□□□ -1.13
ATRX-202ENST00000395603 MYO15BQ96JP2 1530 aa7.98□□□□□ -1.13
ATRX-202ENST00000395603 CENPBP07199 599 aaPredicted RBP7.94□□□□□ -1.14
ATRX-202ENST00000395603 MYT1LQ9UL68 1186 aa7.93□□□□□ -1.14
ATRX-202ENST00000395603 APLP2Q06481 763 aa7.9□□□□□ -1.14
ATRX-202ENST00000395603 SCAF1Q9H7N4 1312 aaKnown RBP7.89□□□□□ -1.15
ATRX-202ENST00000395603 BAZ1BQ9UIG0 1483 aaKnown RBP7.87□□□□□ -1.15
ATRX-202ENST00000395603 ARID4BQ4LE39 1312 aaPredicted RBP7.79□□□□□ -1.16
ATRX-202ENST00000395603 EEA1Q15075 1411 aa7.79□□□□□ -1.16
ATRX-202ENST00000395603 SLC24A1O60721 1099 aa7.76□□□□□ -1.17
ATRX-202ENST00000395603 EIF5BO60841 1220 aaKnown RBP7.76□□□□□ -1.17
ATRX-202ENST00000395603 NACADO15069 1562 aa7.64□□□□□ -1.19
ATRX-202ENST00000395603 NEFMP07197 916 aa7.61□□□□□ -1.19
ATRX-202ENST00000395603 NEFLP07196 543 aa7.59□□□□□ -1.19
ATRX-202ENST00000395603 ZCCHC6Q5VYS8 1495 aaKnown RBP7.58□□□□□ -1.2
ATRX-202ENST00000395603 NEUROD1Q13562 356 aa7.51□□□□□ -1.21
ATRX-202ENST00000395603 TRIM26Q12899 539 aaPredicted RBP7.5□□□□□ -1.21
ATRX-202ENST00000395603 TIMELESSQ9UNS1 1208 aa7.5□□□□□ -1.21
ATRX-202ENST00000395603 ANP32EQ9BTT0 268 aa7.49□□□□□ -1.21
ATRX-202ENST00000395603 DCAF8L2P0C7V8 631 aa7.48□□□□□ -1.21
ATRX-202ENST00000395603 RB1CC1Q8TDY2 1594 aa7.47□□□□□ -1.21
ATRX-202ENST00000395603 ANO8Q9HCE9 1232 aaPredicted RBP7.46□□□□□ -1.22
ATRX-202ENST00000395603 CEP162Q5TB80 1403 aa7.43□□□□□ -1.22
ATRX-202ENST00000395603 ERICH6Q7L0X2 663 aa7.41□□□□□ -1.22
ATRX-202ENST00000395603 CFAP44Q96MT7 982 aa7.4□□□□□ -1.22
ATRX-202ENST00000395603 ERICH6BQ5W0A0 696 aa7.39□□□□□ -1.23
ATRX-202ENST00000395603 TRIM41Q8WV44 630 aa7.39□□□□□ -1.23
ATRX-202ENST00000395603 EHMT2Q96KQ7 1210 aa7.36□□□□□ -1.23
ATRX-202ENST00000395603 GTF3C3Q9Y5Q9 886 aa7.36□□□□□ -1.23
ATRX-202ENST00000395603 IL27Q8NEV9 243 aa7.35□□□□□ -1.23
ATRX-202ENST00000395603 BAZ1AQ9NRL2 1556 aaPredicted RBP7.35□□□□□ -1.23
ATRX-202ENST00000395603 CDK11AQ9UQ88 783 aaPredicted RBP7.33□□□□□ -1.24
ATRX-202ENST00000395603 RANGAP1P46060 587 aaPredicted RBP7.33□□□□□ -1.24
ATRX-202ENST00000395603 GOLGA3Q08378 1498 aa7.32□□□□□ -1.24
ATRX-202ENST00000395603 SUPT5HO00267 1087 aaKnown RBP7.31□□□□□ -1.24
ATRX-202ENST00000395603 CHMP4AQ9BY43 222 aa7.31□□□□□ -1.24
ATRX-202ENST00000395603 DAXXQ9UER7 740 aaPredicted RBP7.31□□□□□ -1.24
ATRX-202ENST00000395603 CHMP4BQ9H444 224 aaKnown RBP7.31□□□□□ -1.24
ATRX-202ENST00000395603 GLIPR1L2Q4G1C9 344 aa7.3□□□□□ -1.24
ATRX-202ENST00000395603 A0A0U1RQG5 324 aaPredicted RBP7.29□□□□□ -1.24
ATRX-202ENST00000395603 ABCC8Q09428 1581 aa7.29□□□□□ -1.24
ATRX-202ENST00000395603 PRKCSHP14314 528 aaPredicted RBP7.29□□□□□ -1.24
ATRX-202ENST00000395603 RSF1Q96T23 1441 aaPredicted RBP7.28□□□□□ -1.24
ATRX-202ENST00000395603 BCL11AQ9H165 835 aa7.28□□□□□ -1.24
ATRX-202ENST00000395603 PKNOX2Q96KN3 472 aa7.28□□□□□ -1.24
ATRX-202ENST00000395603 NGEFQ8N5V2 710 aa7.27□□□□□ -1.25
ATRX-202ENST00000395603 STAC3Q96MF2 364 aa7.26□□□□□ -1.25
ATRX-202ENST00000395603 SMARCA2P51531 1590 aa7.26□□□□□ -1.25
ATRX-202ENST00000395603 FHAD1B1AJZ9 1412 aa7.26□□□□□ -1.25
ATRX-202ENST00000395603 HRCP23327 699 aa7.25□□□□□ -1.25
ATRX-202ENST00000395603 HAP1P54257 671 aaPredicted RBP7.25□□□□□ -1.25
ATRX-202ENST00000395603 PTMSP20962 102 aa7.23□□□□□ -1.25
ATRX-202ENST00000395603 RTL5Q5HYW3 569 aaPredicted RBP7.21□□□□□ -1.25
ATRX-202ENST00000395603 CEP164Q9UPV0 1460 aa7.2□□□□□ -1.26
ATRX-202ENST00000395603 NCLP19338 710 aaKnown RBP7.2□□□□□ -1.26
ATRX-202ENST00000395603 SCAPERQ9BY12 1400 aa7.19□□□□□ -1.26
ATRX-202ENST00000395603 ABCC9O60706 1549 aa7.19□□□□□ -1.26
ATRX-202ENST00000395603 USP35Q9P2H5 1018 aa7.18□□□□□ -1.26
ATRX-202ENST00000395603 CDCA8Q53HL2 280 aa7.18□□□□□ -1.26
ATRX-202ENST00000395603 AAMPQ13685 434 aa7.18□□□□□ -1.26
ATRX-202ENST00000395603 CSRNP3Q8WYN3 585 aa7.18□□□□□ -1.26
ATRX-202ENST00000395603 PLPPR3Q6T4P5 718 aa7.18□□□□□ -1.26
ATRX-202ENST00000395603 AEBP2Q6ZN18 517 aaPredicted RBP7.17□□□□□ -1.26
ATRX-202ENST00000395603 WWC1Q8IX03 1113 aa7.17□□□□□ -1.26
ATRX-202ENST00000395603 HMGB3O15347 200 aaKnown RBP7.17□□□□□ -1.26
ATRX-202ENST00000395603 MS4A1P11836 297 aa7.15□□□□□ -1.26
ATRX-202ENST00000395603 HMGB1P09429 215 aaKnown RBP7.15□□□□□ -1.27
ATRX-202ENST00000395603 HMGB2P26583 209 aaKnown RBP7.15□□□□□ -1.27
ATRX-202ENST00000395603 PHLDB1Q86UU1 1377 aa7.15□□□□□ -1.27
ATRX-202ENST00000395603 ANP32BQ92688 251 aaKnown RBP7.14□□□□□ -1.27
ATRX-202ENST00000395603 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.14□□□□□ -1.27
ATRX-202ENST00000395603 CHMP4CQ96CF2 233 aa7.14□□□□□ -1.27
ATRX-202ENST00000395603 PLEKHG5O94827 1062 aa7.13□□□□□ -1.27
ATRX-202ENST00000395603 ANP32AP39687 249 aaKnown RBP7.13□□□□□ -1.27
ATRX-202ENST00000395603 KTN1Q86UP2 1357 aaKnown RBP7.12□□□□□ -1.27
ATRX-202ENST00000395603 ERCC6Q03468 1493 aa7.12□□□□□ -1.27
ATRX-202ENST00000395603 CLIP1P30622 1438 aa7.11□□□□□ -1.27
ATRX-202ENST00000395603 RSPH4AQ5TD94 716 aa7.11□□□□□ -1.27
ATRX-202ENST00000395603 UBTFP17480 764 aaKnown RBP7.1□□□□□ -1.27
ATRX-202ENST00000395603 TNIKQ9UKE5 1360 aa7.1□□□□□ -1.27
ATRX-202ENST00000395603 AKNAQ7Z591 1439 aa7.1□□□□□ -1.27
ATRX-202ENST00000395603 ROCK2O75116 1388 aaKnown RBP7.1□□□□□ -1.27
ATRX-202ENST00000395603 WRNQ14191 1432 aaPredicted RBP eCLIP7.09□□□□□ -1.27
ATRX-202ENST00000395603 UPF2Q9HAU5 1272 aaKnown RBP7.09□□□□□ -1.27
ATRX-202ENST00000395603 TRIM44Q96DX7 344 aaPredicted RBP7.08□□□□□ -1.28
ATRX-202ENST00000395603 KIF27Q86VH2 1401 aa7.07□□□□□ -1.28
ATRX-202ENST00000395603 HDAC5Q9UQL6 1122 aa7.07□□□□□ -1.28
ATRX-202ENST00000395603 CCDC18Q5T9S5 1454 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms