RNA–Protein interactions for RNA: ENST00000358506.6

PPP1CB-202, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PPP1CB, Length 4,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-202ENST00000358506 NISCHQ9Y2I1 1504 aa30.68■■■□□ 2.5
PPP1CB-202ENST00000358506 DCAF8L2P0C7V8 631 aa29.45■■■□□ 2.31
PPP1CB-202ENST00000358506 SUPT5HO00267 1087 aaKnown RBP28.31■■■□□ 2.12
PPP1CB-202ENST00000358506 SHROOM4Q9ULL8 1493 aa28.27■■■□□ 2.12
PPP1CB-202ENST00000358506 EHMT2Q96KQ7 1210 aa26.83■■□□□ 1.89
PPP1CB-202ENST00000358506 FAM9AQ8IZU1 332 aaPredicted RBP26.51■■□□□ 1.84
PPP1CB-202ENST00000358506 TRIM41Q8WV44 630 aa26.27■■□□□ 1.8
PPP1CB-202ENST00000358506 PCGF6Q9BYE7 350 aa26.17■■□□□ 1.78
PPP1CB-202ENST00000358506 APLP2Q06481 763 aa25.94■■□□□ 1.74
PPP1CB-202ENST00000358506 CHIC1Q5VXU3 224 aa25.91■■□□□ 1.74
PPP1CB-202ENST00000358506 TTBK1Q5TCY1 1321 aaPredicted RBP25.87■■□□□ 1.73
PPP1CB-202ENST00000358506 ABCC9O60706 1549 aa25.8■■□□□ 1.72
PPP1CB-202ENST00000358506 RANGAP1P46060 587 aaPredicted RBP25.69■■□□□ 1.7
PPP1CB-202ENST00000358506 UBTFP17480 764 aaKnown RBP25.64■■□□□ 1.7
PPP1CB-202ENST00000358506 LOC105371045A0A1W2PR82 267 aa25.61■■□□□ 1.69
PPP1CB-202ENST00000358506 ZCCHC6Q5VYS8 1495 aaKnown RBP25.54■■□□□ 1.68
PPP1CB-202ENST00000358506 PPARGC1BQ86YN6 1023 aaKnown RBP25.4■■□□□ 1.66
PPP1CB-202ENST00000358506 CCDC180Q9P1Z9 1646 aa25.39■■□□□ 1.65
PPP1CB-202ENST00000358506 ZEB1P37275 1124 aaPredicted RBP25.38■■□□□ 1.65
PPP1CB-202ENST00000358506 CCER1Q8TC90 406 aaPredicted RBP25.35■■□□□ 1.65
PPP1CB-202ENST00000358506 PABPN1Q86U42 306 aaKnown RBP eCLIP25.35■■□□□ 1.65
PPP1CB-202ENST00000358506 TRIM26Q12899 539 aaPredicted RBP25.31■■□□□ 1.64
PPP1CB-202ENST00000358506 ATP1B4Q9UN42 357 aaPredicted RBP25.21■■□□□ 1.63
PPP1CB-202ENST00000358506 HRCP23327 699 aa25.1■■□□□ 1.61
PPP1CB-202ENST00000358506 SCRIBQ14160 1630 aa25.03■■□□□ 1.6
PPP1CB-202ENST00000358506 CENPBP07199 599 aaPredicted RBP24.7■■□□□ 1.54
PPP1CB-202ENST00000358506 HNRNPUL2Q1KMD3 747 aaKnown RBP24.7■■□□□ 1.54
PPP1CB-202ENST00000358506 ITGAEP38570 1179 aa24.65■■□□□ 1.54
PPP1CB-202ENST00000358506 PELP1Q8IZL8 1130 aaKnown RBP24.64■■□□□ 1.54
PPP1CB-202ENST00000358506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.56■■□□□ 1.52
PPP1CB-202ENST00000358506 CSRNP3Q8WYN3 585 aa24.49■■□□□ 1.51
PPP1CB-202ENST00000358506 RSF1Q96T23 1441 aaPredicted RBP24.48■■□□□ 1.51
PPP1CB-202ENST00000358506 DCAF1Q9Y4B6 1507 aa24.46■■□□□ 1.51
PPP1CB-202ENST00000358506 YTHDC1Q96MU7 727 aaKnown RBP24.43■■□□□ 1.5
PPP1CB-202ENST00000358506 RB1CC1Q8TDY2 1594 aa24.41■■□□□ 1.5
PPP1CB-202ENST00000358506 NACADO15069 1562 aa24.39■■□□□ 1.5
PPP1CB-202ENST00000358506 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
PPP1CB-202ENST00000358506 FAM50AQ14320 339 aaKnown RBP24.16■■□□□ 1.46
PPP1CB-202ENST00000358506 CECR2Q9BXF3 1484 aa24.11■■□□□ 1.45
PPP1CB-202ENST00000358506 DIEXFQ68CQ4 756 aaKnown RBP24.07■■□□□ 1.44
PPP1CB-202ENST00000358506 P3H3Q8IVL6 736 aa24.03■■□□□ 1.44
PPP1CB-202ENST00000358506 NEFLP07196 543 aa23.94■■□□□ 1.42
PPP1CB-202ENST00000358506 BAZ1AQ9NRL2 1556 aaPredicted RBP23.93■■□□□ 1.42
PPP1CB-202ENST00000358506 MYT1LQ9UL68 1186 aa23.87■■□□□ 1.41
PPP1CB-202ENST00000358506 FBLN2P98095 1184 aa23.86■■□□□ 1.41
PPP1CB-202ENST00000358506 NEUROD1Q13562 356 aa23.86■■□□□ 1.41
PPP1CB-202ENST00000358506 POLR3GLQ9BT43 218 aa23.84■■□□□ 1.41
PPP1CB-202ENST00000358506 MROH2BQ7Z745 1585 aa23.82■■□□□ 1.4
PPP1CB-202ENST00000358506 TRIM52Q96A61 297 aa23.81■■□□□ 1.4
PPP1CB-202ENST00000358506 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
PPP1CB-202ENST00000358506 WRNQ14191 1432 aaPredicted RBP eCLIP23.79■■□□□ 1.4
PPP1CB-202ENST00000358506 EEA1Q15075 1411 aa23.75■■□□□ 1.39
PPP1CB-202ENST00000358506 ZNF316A6NFI3 1004 aaPredicted RBP23.74■■□□□ 1.39
PPP1CB-202ENST00000358506 ARID3CA6NKF2 412 aa23.73■■□□□ 1.39
PPP1CB-202ENST00000358506 CLIP1P30622 1438 aa23.7■■□□□ 1.38
PPP1CB-202ENST00000358506 CNGB1Q14028 1251 aaPredicted RBP23.68■■□□□ 1.38
PPP1CB-202ENST00000358506 CEP162Q5TB80 1403 aa23.67■■□□□ 1.38
PPP1CB-202ENST00000358506 GOLGA3Q08378 1498 aa23.64■■□□□ 1.37
PPP1CB-202ENST00000358506 TNIKQ9UKE5 1360 aa23.57■■□□□ 1.36
PPP1CB-202ENST00000358506 CCDC88BA6NC98 1476 aa23.56■■□□□ 1.36
PPP1CB-202ENST00000358506 ERICH6Q7L0X2 663 aa23.54■■□□□ 1.36
PPP1CB-202ENST00000358506 SOGA1O94964 1423 aa23.5■■□□□ 1.35
PPP1CB-202ENST00000358506 WIZO95785 1651 aa23.48■■□□□ 1.35
PPP1CB-202ENST00000358506 CEP164Q9UPV0 1460 aa23.47■■□□□ 1.35
PPP1CB-202ENST00000358506 KIF27Q86VH2 1401 aa23.44■■□□□ 1.34
PPP1CB-202ENST00000358506 CDK11AQ9UQ88 783 aaPredicted RBP23.44■■□□□ 1.34
PPP1CB-202ENST00000358506 ZNF326Q5BKZ1 582 aaKnown RBP23.43■■□□□ 1.34
PPP1CB-202ENST00000358506 ZNF777Q9ULD5 760 aaPredicted RBP23.42■■□□□ 1.34
PPP1CB-202ENST00000358506 ABCC8Q09428 1581 aa23.41■■□□□ 1.34
PPP1CB-202ENST00000358506 GTF3C3Q9Y5Q9 886 aa23.39■■□□□ 1.33
PPP1CB-202ENST00000358506 ANP32CO43423 234 aa23.36■■□□□ 1.33
PPP1CB-202ENST00000358506 TOP2AP11388 1531 aaKnown RBP23.34■■□□□ 1.33
PPP1CB-202ENST00000358506 MTUS2Q5JR59 1369 aa23.3■■□□□ 1.32
PPP1CB-202ENST00000358506 SMARCA2P51531 1590 aa23.29■■□□□ 1.32
PPP1CB-202ENST00000358506 ACIN1Q9UKV3 1341 aaKnown RBP23.28■■□□□ 1.32
PPP1CB-202ENST00000358506 CHIC2Q9UKJ5 165 aa23.26■■□□□ 1.31
PPP1CB-202ENST00000358506 TONSLQ96HA7 1378 aa23.23■■□□□ 1.31
PPP1CB-202ENST00000358506 CHMP7Q8WUX9 453 aaPredicted RBP23.21■■□□□ 1.31
PPP1CB-202ENST00000358506 SMARCA4P51532 1647 aa23.19■■□□□ 1.3
PPP1CB-202ENST00000358506 SLC4A1APQ9BWU0 796 aaKnown RBP23.17■■□□□ 1.3
PPP1CB-202ENST00000358506 CUX2O14529 1486 aa23.15■■□□□ 1.3
PPP1CB-202ENST00000358506 ATAD2BQ9ULI0 1458 aa23.14■■□□□ 1.3
PPP1CB-202ENST00000358506 CARMIL1Q5VZK9 1371 aa23.11■■□□□ 1.29
PPP1CB-202ENST00000358506 DDX10Q13206 875 aaKnown RBP23.1■■□□□ 1.29
PPP1CB-202ENST00000358506 BCANQ96GW7 911 aa23.1■■□□□ 1.29
PPP1CB-202ENST00000358506 VPS8Q8N3P4 1428 aa23.03■■□□□ 1.28
PPP1CB-202ENST00000358506 RRP7BPQ9NSQ0 103 aa23.03■■□□□ 1.28
PPP1CB-202ENST00000358506 MIER1Q8N108 512 aa23■■□□□ 1.27
PPP1CB-202ENST00000358506 TSPY4P0CV99 314 aa22.96■■□□□ 1.27
PPP1CB-202ENST00000358506 TSPY10P0CW01 314 aa22.96■■□□□ 1.27
PPP1CB-202ENST00000358506 RUSC2Q8N2Y8 1516 aa22.94■■□□□ 1.26
PPP1CB-202ENST00000358506 HIRIP3Q9BW71 556 aaPredicted RBP22.93■■□□□ 1.26
PPP1CB-202ENST00000358506 CADPSQ9ULU8 1353 aa22.92■■□□□ 1.26
PPP1CB-202ENST00000358506 KANK4Q5T7N3 995 aaPredicted RBP22.92■■□□□ 1.26
PPP1CB-202ENST00000358506 FHAD1B1AJZ9 1412 aa22.91■■□□□ 1.26
PPP1CB-202ENST00000358506 CCNB3Q8WWL7 1395 aa22.91■■□□□ 1.26
PPP1CB-202ENST00000358506 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.87■■□□□ 1.252e-7■■■□□ 17.1
PPP1CB-202ENST00000358506 PLEKHD1A6NEE1 506 aa22.87■■□□□ 1.25
PPP1CB-202ENST00000358506 RAPGEF2Q9Y4G8 1499 aa22.85■■□□□ 1.25
PPP1CB-202ENST00000358506 ERCC6Q03468 1493 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms