RNA–Protein interactions for RNA: ENST00000373344.9

ATRX-201, Transcript of ATRX, chromatin remodeler, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATRX, Length 11,220 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-201ENST00000373344 DCAF8L2P0C7V8 631 aa9.67□□□□□ -0.86
ATRX-201ENST00000373344 NISCHQ9Y2I1 1504 aa8.9□□□□□ -0.98
ATRX-201ENST00000373344 SUPT5HO00267 1087 aaKnown RBP8.83□□□□□ -1
ATRX-201ENST00000373344 SHROOM4Q9ULL8 1493 aa8.76□□□□□ -1.01
ATRX-201ENST00000373344 EHMT2Q96KQ7 1210 aa8.7□□□□□ -1.02
ATRX-201ENST00000373344 FAM9AQ8IZU1 332 aaPredicted RBP8.43□□□□□ -1.06
ATRX-201ENST00000373344 RANGAP1P46060 587 aaPredicted RBP8.38□□□□□ -1.07
ATRX-201ENST00000373344 APLP2Q06481 763 aa8.37□□□□□ -1.07
ATRX-201ENST00000373344 ATP1B4Q9UN42 357 aaPredicted RBP8.34□□□□□ -1.07
ATRX-201ENST00000373344 TTBK1Q5TCY1 1321 aaPredicted RBP8.32□□□□□ -1.08
ATRX-201ENST00000373344 TRIM41Q8WV44 630 aa8.16□□□□□ -1.1
ATRX-201ENST00000373344 UBTFP17480 764 aaKnown RBP8.12□□□□□ -1.11
ATRX-201ENST00000373344 MYT1LQ9UL68 1186 aa8.11□□□□□ -1.11
ATRX-201ENST00000373344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.06□□□□□ -1.12
ATRX-201ENST00000373344 HNRNPUL2Q1KMD3 747 aaKnown RBP8.06□□□□□ -1.12
ATRX-201ENST00000373344 ABCC9O60706 1549 aa8.05□□□□□ -1.12
ATRX-201ENST00000373344 PABPN1Q86U42 306 aaKnown RBP eCLIP8.04□□□□□ -1.12
ATRX-201ENST00000373344 PCGF6Q9BYE7 350 aa8.03□□□□□ -1.12
ATRX-201ENST00000373344 CHIC1Q5VXU3 224 aa8.01□□□□□ -1.13
ATRX-201ENST00000373344 PPARGC1BQ86YN6 1023 aaKnown RBP7.95□□□□□ -1.14
ATRX-201ENST00000373344 CCER1Q8TC90 406 aaPredicted RBP7.92□□□□□ -1.14
ATRX-201ENST00000373344 ITGAEP38570 1179 aa7.91□□□□□ -1.14
ATRX-201ENST00000373344 FBLN2P98095 1184 aa7.89□□□□□ -1.15
ATRX-201ENST00000373344 PELP1Q8IZL8 1130 aaKnown RBP7.85□□□□□ -1.15
ATRX-201ENST00000373344 POLR3GLQ9BT43 218 aa7.81□□□□□ -1.16
ATRX-201ENST00000373344 SLC4A1APQ9BWU0 796 aaKnown RBP7.79□□□□□ -1.16
ATRX-201ENST00000373344 CNGB1Q14028 1251 aaPredicted RBP7.78□□□□□ -1.16
ATRX-201ENST00000373344 LOC105371045A0A1W2PR82 267 aa7.73□□□□□ -1.17
ATRX-201ENST00000373344 PLPPR3Q6T4P5 718 aa7.68□□□□□ -1.18
ATRX-201ENST00000373344 FAM50AQ14320 339 aaKnown RBP7.68□□□□□ -1.18
ATRX-201ENST00000373344 ARID3CA6NKF2 412 aa7.67□□□□□ -1.18
ATRX-201ENST00000373344 BCANQ96GW7 911 aa7.66□□□□□ -1.18
ATRX-201ENST00000373344 YTHDC1Q96MU7 727 aaKnown RBP7.65□□□□□ -1.18
ATRX-201ENST00000373344 ZEB1P37275 1124 aaPredicted RBP7.65□□□□□ -1.18
ATRX-201ENST00000373344 TRIM52Q96A61 297 aa7.64□□□□□ -1.19
ATRX-201ENST00000373344 P3H3Q8IVL6 736 aa7.63□□□□□ -1.19
ATRX-201ENST00000373344 ERICH6Q7L0X2 663 aa7.61□□□□□ -1.19
ATRX-201ENST00000373344 CENPBP07199 599 aaPredicted RBP7.6□□□□□ -1.19
ATRX-201ENST00000373344 TRIM26Q12899 539 aaPredicted RBP7.58□□□□□ -1.2
ATRX-201ENST00000373344 SLC24A1O60721 1099 aa7.58□□□□□ -1.2
ATRX-201ENST00000373344 NPM1P06748 294 aaKnown RBP eCLIP7.57□□□□□ -1.2
ATRX-201ENST00000373344 NEFLP07196 543 aa7.57□□□□□ -1.2
ATRX-201ENST00000373344 ZNF777Q9ULD5 760 aaPredicted RBP7.57□□□□□ -1.2
ATRX-201ENST00000373344 ESF1Q9H501 851 aaKnown RBP7.56□□□□□ -1.2
ATRX-201ENST00000373344 SCRIBQ14160 1630 aa7.56□□□□□ -1.2
ATRX-201ENST00000373344 NEUROD1Q13562 356 aa7.54□□□□□ -1.2
ATRX-201ENST00000373344 ZNF326Q5BKZ1 582 aaKnown RBP7.54□□□□□ -1.2
ATRX-201ENST00000373344 STAG3Q9UJ98 1225 aa7.49□□□□□ -1.21
ATRX-201ENST00000373344 CHGAP10645 457 aaKnown RBP7.48□□□□□ -1.21
ATRX-201ENST00000373344 CHMP7Q8WUX9 453 aaPredicted RBP7.47□□□□□ -1.21
ATRX-201ENST00000373344 CDK11AQ9UQ88 783 aaPredicted RBP7.45□□□□□ -1.22
ATRX-201ENST00000373344 BCL11AQ9H165 835 aa7.42□□□□□ -1.22
ATRX-201ENST00000373344 SCAF1Q9H7N4 1312 aaKnown RBP7.41□□□□□ -1.22
ATRX-201ENST00000373344 DAXXQ9UER7 740 aaPredicted RBP7.41□□□□□ -1.22
ATRX-201ENST00000373344 CSRNP3Q8WYN3 585 aa7.4□□□□□ -1.22
ATRX-201ENST00000373344 TRHP20396 242 aaPredicted RBP7.4□□□□□ -1.23
ATRX-201ENST00000373344 SENP3Q9H4L4 574 aaPredicted RBP7.39□□□□□ -1.23
ATRX-201ENST00000373344 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.39□□□□□ -1.231e-6■■■□□ 14.9
ATRX-201ENST00000373344 CLSPNQ9HAW4 1339 aa7.39□□□□□ -1.23
ATRX-201ENST00000373344 KCNH8Q96L42 1107 aa7.39□□□□□ -1.23
ATRX-201ENST00000373344 RB1CC1Q8TDY2 1594 aa7.38□□□□□ -1.23
ATRX-201ENST00000373344 PLEKHG5O94827 1062 aa7.37□□□□□ -1.23
ATRX-201ENST00000373344 NEFMP07197 916 aa7.37□□□□□ -1.23
ATRX-201ENST00000373344 HRCP23327 699 aa7.35□□□□□ -1.23
ATRX-201ENST00000373344 ERCC6Q03468 1493 aa7.35□□□□□ -1.23
ATRX-201ENST00000373344 ARID4BQ4LE39 1312 aaPredicted RBP7.35□□□□□ -1.23
ATRX-201ENST00000373344 CHIC2Q9UKJ5 165 aa7.34□□□□□ -1.23
ATRX-201ENST00000373344 A0A0G2JS52 829 aa7.33□□□□□ -1.24
ATRX-201ENST00000373344 CCDC180Q9P1Z9 1646 aa7.32□□□□□ -1.24
ATRX-201ENST00000373344 TSPY4P0CV99 314 aa7.31□□□□□ -1.24
ATRX-201ENST00000373344 TSPY10P0CW01 314 aa7.31□□□□□ -1.24
ATRX-201ENST00000373344 ZBTB47Q9UFB7 747 aaPredicted RBP7.31□□□□□ -1.24
ATRX-201ENST00000373344 DIEXFQ68CQ4 756 aaKnown RBP7.29□□□□□ -1.24
ATRX-201ENST00000373344 C14orf37Q86TY3 774 aa7.29□□□□□ -1.24
ATRX-201ENST00000373344 ZCCHC6Q5VYS8 1495 aaKnown RBP7.28□□□□□ -1.24
ATRX-201ENST00000373344 ZBTB7CA1YPR0 619 aa7.28□□□□□ -1.24
ATRX-201ENST00000373344 ANP32CO43423 234 aa7.28□□□□□ -1.24
ATRX-201ENST00000373344 KDM2AQ9Y2K7 1162 aa7.27□□□□□ -1.25
ATRX-201ENST00000373344 CANXP27824 592 aaKnown RBP7.26□□□□□ -1.25
ATRX-201ENST00000373344 HAP1P54257 671 aaPredicted RBP7.24□□□□□ -1.25
ATRX-201ENST00000373344 PLEKHD1A6NEE1 506 aa7.24□□□□□ -1.25
ATRX-201ENST00000373344 PPP1R15AO75807 674 aaPredicted RBP7.24□□□□□ -1.25
ATRX-201ENST00000373344 MTUS2Q5JR59 1369 aa7.24□□□□□ -1.25
ATRX-201ENST00000373344 BAZ1BQ9UIG0 1483 aaKnown RBP7.23□□□□□ -1.25
ATRX-201ENST00000373344 ZNF316A6NFI3 1004 aaPredicted RBP7.22□□□□□ -1.25
ATRX-201ENST00000373344 SALL2Q9Y467 1007 aaPredicted RBP7.22□□□□□ -1.25
ATRX-201ENST00000373344 NACADO15069 1562 aa7.21□□□□□ -1.26
ATRX-201ENST00000373344 MLECQ14165 292 aa7.21□□□□□ -1.26
ATRX-201ENST00000373344 RGL3Q3MIN7 710 aa7.19□□□□□ -1.26
ATRX-201ENST00000373344 MYO15BQ96JP2 1530 aa7.19□□□□□ -1.26
ATRX-201ENST00000373344 TONSLQ96HA7 1378 aa7.18□□□□□ -1.26
ATRX-201ENST00000373344 NPM2Q86SE8 214 aaKnown RBP7.18□□□□□ -1.26
ATRX-201ENST00000373344 LMOD2Q6P5Q4 547 aa7.18□□□□□ -1.26
ATRX-201ENST00000373344 RRP7BPQ9NSQ0 103 aa7.18□□□□□ -1.26
ATRX-201ENST00000373344 MYT1Q01538 1121 aa7.16□□□□□ -1.26
ATRX-201ENST00000373344 TMC1Q8TDI8 760 aa7.15□□□□□ -1.26
ATRX-201ENST00000373344 ARXQ96QS3 562 aa7.15□□□□□ -1.26
ATRX-201ENST00000373344 CFDP1Q9UEE9 299 aaPredicted RBP7.15□□□□□ -1.27
ATRX-201ENST00000373344 FAM9BQ8IZU0 186 aa7.13□□□□□ -1.27
ATRX-201ENST00000373344 PPM1GO15355 546 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms