RNA–Protein interactions for RNA: ENST00000572621.5

PRPF8-205, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF8, Length 7,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-205ENST00000572621 DCAF8L2P0C7V8 631 aa23.28■■□□□ 1.32
PRPF8-205ENST00000572621 SUPT5HO00267 1087 aaKnown RBP22.34■■□□□ 1.17
PRPF8-205ENST00000572621 PELP1Q8IZL8 1130 aaKnown RBP22.28■■□□□ 1.16
PRPF8-205ENST00000572621 EHMT2Q96KQ7 1210 aa22.01■■□□□ 1.11
PRPF8-205ENST00000572621 SHROOM4Q9ULL8 1493 aa21.68■■□□□ 1.06
PRPF8-205ENST00000572621 ERICH6Q7L0X2 663 aa21.5■■□□□ 1.03
PRPF8-205ENST00000572621 APLP2Q06481 763 aa21.46■■□□□ 1.03
PRPF8-205ENST00000572621 PCGF6Q9BYE7 350 aa21.4■■□□□ 1.02
PRPF8-205ENST00000572621 TTBK1Q5TCY1 1321 aaPredicted RBP21.33■■□□□ 1
PRPF8-205ENST00000572621 CENPBP07199 599 aaPredicted RBP21.32■■□□□ 1
PRPF8-205ENST00000572621 CCER1Q8TC90 406 aaPredicted RBP21.27■□□□□ 0.99
PRPF8-205ENST00000572621 FAM9AQ8IZU1 332 aaPredicted RBP21.2■□□□□ 0.98
PRPF8-205ENST00000572621 MYT1Q01538 1121 aa21.04■□□□□ 0.96
PRPF8-205ENST00000572621 ZEB1P37275 1124 aaPredicted RBP20.97■□□□□ 0.95
PRPF8-205ENST00000572621 NISCHQ9Y2I1 1504 aa20.92■□□□□ 0.94
PRPF8-205ENST00000572621 YTHDC1Q96MU7 727 aaKnown RBP20.89■□□□□ 0.93
PRPF8-205ENST00000572621 NEFLP07196 543 aa20.88■□□□□ 0.93
PRPF8-205ENST00000572621 RANGAP1P46060 587 aaPredicted RBP20.86■□□□□ 0.93
PRPF8-205ENST00000572621 ATP1B4Q9UN42 357 aaPredicted RBP20.68■□□□□ 0.9
PRPF8-205ENST00000572621 TRIM41Q8WV44 630 aa20.55■□□□□ 0.88
PRPF8-205ENST00000572621 UBTFP17480 764 aaKnown RBP20.47■□□□□ 0.87
PRPF8-205ENST00000572621 DAXXQ9UER7 740 aaPredicted RBP20.43■□□□□ 0.86
PRPF8-205ENST00000572621 PPARGC1BQ86YN6 1023 aaKnown RBP20.41■□□□□ 0.86
PRPF8-205ENST00000572621 HRCP23327 699 aa20.22■□□□□ 0.83
PRPF8-205ENST00000572621 TRIM26Q12899 539 aaPredicted RBP20.2■□□□□ 0.82
PRPF8-205ENST00000572621 POLR3GLQ9BT43 218 aa20.15■□□□□ 0.82
PRPF8-205ENST00000572621 CNGB1Q14028 1251 aaPredicted RBP20.07■□□□□ 0.8
PRPF8-205ENST00000572621 ITGAEP38570 1179 aa20.04■□□□□ 0.8
PRPF8-205ENST00000572621 RTL5Q5HYW3 569 aaPredicted RBP20.02■□□□□ 0.79
PRPF8-205ENST00000572621 ZNF316A6NFI3 1004 aaPredicted RBP19.93■□□□□ 0.78
PRPF8-205ENST00000572621 HNRNPUL2Q1KMD3 747 aaKnown RBP19.87■□□□□ 0.77
PRPF8-205ENST00000572621 CLSPNQ9HAW4 1339 aa19.86■□□□□ 0.77
PRPF8-205ENST00000572621 LOC105371045A0A1W2PR82 267 aa19.81■□□□□ 0.76
PRPF8-205ENST00000572621 DIEXFQ68CQ4 756 aaKnown RBP19.81■□□□□ 0.76
PRPF8-205ENST00000572621 MYT1LQ9UL68 1186 aa19.8■□□□□ 0.76
PRPF8-205ENST00000572621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.74■□□□□ 0.75
PRPF8-205ENST00000572621 SLC4A1APQ9BWU0 796 aaKnown RBP19.71■□□□□ 0.75
PRPF8-205ENST00000572621 BCANQ96GW7 911 aa19.65■□□□□ 0.74
PRPF8-205ENST00000572621 CHIC1Q5VXU3 224 aa19.62■□□□□ 0.73
PRPF8-205ENST00000572621 GTF3C3Q9Y5Q9 886 aa19.62■□□□□ 0.73
PRPF8-205ENST00000572621 CDK11AQ9UQ88 783 aaPredicted RBP19.5■□□□□ 0.71
PRPF8-205ENST00000572621 NEUROD1Q13562 356 aa19.38■□□□□ 0.69
PRPF8-205ENST00000572621 FAM50AQ14320 339 aaKnown RBP19.36■□□□□ 0.69
PRPF8-205ENST00000572621 ANP32CO43423 234 aa19.32■□□□□ 0.68
PRPF8-205ENST00000572621 BCL11AQ9H165 835 aa19.32■□□□□ 0.68
PRPF8-205ENST00000572621 ZBTB47Q9UFB7 747 aaPredicted RBP19.3■□□□□ 0.68
PRPF8-205ENST00000572621 EIF5BO60841 1220 aaKnown RBP19.29■□□□□ 0.68
PRPF8-205ENST00000572621 TRIM52Q96A61 297 aa19.29■□□□□ 0.68
PRPF8-205ENST00000572621 ANP32AP39687 249 aaKnown RBP19.21■□□□□ 0.67
PRPF8-205ENST00000572621 ZNF326Q5BKZ1 582 aaKnown RBP19.19■□□□□ 0.66
PRPF8-205ENST00000572621 CANXP27824 592 aaKnown RBP19.17■□□□□ 0.66
PRPF8-205ENST00000572621 ACIN1Q9UKV3 1341 aaKnown RBP19.16■□□□□ 0.66
PRPF8-205ENST00000572621 NPM2Q86SE8 214 aaKnown RBP19.16■□□□□ 0.66
PRPF8-205ENST00000572621 SLC24A1O60721 1099 aa19.12■□□□□ 0.65
PRPF8-205ENST00000572621 ANP32BQ92688 251 aaKnown RBP19.01■□□□□ 0.63
PRPF8-205ENST00000572621 FKBP8Q14318 412 aa18.96■□□□□ 0.63
PRPF8-205ENST00000572621 GLIPR1L2Q4G1C9 344 aa18.95■□□□□ 0.62
PRPF8-205ENST00000572621 HSP90AA1P07900 732 aaKnown RBP18.93■□□□□ 0.62
PRPF8-205ENST00000572621 NEFMP07197 916 aa18.92■□□□□ 0.62
PRPF8-205ENST00000572621 NBR1Q14596 966 aa18.9■□□□□ 0.62
PRPF8-205ENST00000572621 ARXQ96QS3 562 aa18.83■□□□□ 0.6
PRPF8-205ENST00000572621 UPF2Q9HAU5 1272 aaKnown RBP18.8■□□□□ 0.6
PRPF8-205ENST00000572621 HNRNPUQ00839 825 aaKnown RBP eCLIP18.77■□□□□ 0.6
PRPF8-205ENST00000572621 SALL2Q9Y467 1007 aaPredicted RBP18.72■□□□□ 0.59
PRPF8-205ENST00000572621 FAM9BQ8IZU0 186 aa18.71■□□□□ 0.59
PRPF8-205ENST00000572621 CCDC136Q96JN2 1154 aa18.67■□□□□ 0.58
PRPF8-205ENST00000572621 DDX10Q13206 875 aaKnown RBP18.66■□□□□ 0.58
PRPF8-205ENST00000572621 P3H3Q8IVL6 736 aa18.63■□□□□ 0.57
PRPF8-205ENST00000572621 ARID3CA6NKF2 412 aa18.63■□□□□ 0.57
PRPF8-205ENST00000572621 FBLN2P98095 1184 aa18.6■□□□□ 0.57
PRPF8-205ENST00000572621 SCAF1Q9H7N4 1312 aaKnown RBP18.55■□□□□ 0.56
PRPF8-205ENST00000572621 TONSLQ96HA7 1378 aa18.55■□□□□ 0.56
PRPF8-205ENST00000572621 ZNF777Q9ULD5 760 aaPredicted RBP18.55■□□□□ 0.56
PRPF8-205ENST00000572621 IRX6P78412 446 aaPredicted RBP18.54■□□□□ 0.56
PRPF8-205ENST00000572621 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.54■□□□□ 0.56
PRPF8-205ENST00000572621 TMC1Q8TDI8 760 aa18.53■□□□□ 0.56
PRPF8-205ENST00000572621 PABPN1Q86U42 306 aaKnown RBP eCLIP18.45■□□□□ 0.548e-6■□□□□ 8.9
PRPF8-205ENST00000572621 TRIM44Q96DX7 344 aaPredicted RBP18.44■□□□□ 0.54
PRPF8-205ENST00000572621 CHGAP10645 457 aaKnown RBP18.42■□□□□ 0.54
PRPF8-205ENST00000572621 MRS2Q9HD23 443 aa18.4■□□□□ 0.54
PRPF8-205ENST00000572621 CSRNP3Q8WYN3 585 aa18.4■□□□□ 0.54
PRPF8-205ENST00000572621 MIER1Q8N108 512 aa18.39■□□□□ 0.53
PRPF8-205ENST00000572621 WDR43Q15061 677 aaKnown RBP eCLIP18.38■□□□□ 0.533e-6■□□□□ 10.2
PRPF8-205ENST00000572621 TNNT2P45379 298 aaPredicted RBP18.33■□□□□ 0.53
PRPF8-205ENST00000572621 HIRIP3Q9BW71 556 aaPredicted RBP18.33■□□□□ 0.52
PRPF8-205ENST00000572621 STAG3Q9UJ98 1225 aa18.32■□□□□ 0.52
PRPF8-205ENST00000572621 BECN1Q14457 450 aa18.32■□□□□ 0.52
PRPF8-205ENST00000572621 CDK11BP21127 795 aaKnown RBP18.31■□□□□ 0.52
PRPF8-205ENST00000572621 DDRGK1Q96HY6 314 aa18.3■□□□□ 0.52
PRPF8-205ENST00000572621 RTN4Q9NQC3 1192 aaKnown RBP18.28■□□□□ 0.52
PRPF8-205ENST00000572621 ANP32EQ9BTT0 268 aa18.28■□□□□ 0.52
PRPF8-205ENST00000572621 MYH16Q9H6N6 1097 aa18.28■□□□□ 0.52
PRPF8-205ENST00000572621 NCLP19338 710 aaKnown RBP18.26■□□□□ 0.51
PRPF8-205ENST00000572621 ESF1Q9H501 851 aaKnown RBP18.26■□□□□ 0.51
PRPF8-205ENST00000572621 KDM2AQ9Y2K7 1162 aa18.26■□□□□ 0.51
PRPF8-205ENST00000572621 DNTTIP2Q5QJE6 756 aaKnown RBP18.25■□□□□ 0.51
PRPF8-205ENST00000572621 GOLGA6L22H0YM25 854 aa18.24■□□□□ 0.51
PRPF8-205ENST00000572621 PLPPR3Q6T4P5 718 aa18.24■□□□□ 0.51
PRPF8-205ENST00000572621 CHIC2Q9UKJ5 165 aa18.24■□□□□ 0.51
PRPF8-205ENST00000572621 PTMAP06454 111 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms