RNA–Protein interactions for RNA: ENST00000464273.1

PPP1CB-209, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 2

Gene PPP1CB, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-209ENST00000464273 NISCHQ9Y2I1 1504 aa32.96■■■□□ 2.87
PPP1CB-209ENST00000464273 CCDC180Q9P1Z9 1646 aa28.9■■■□□ 2.22
PPP1CB-209ENST00000464273 ABCC9O60706 1549 aa27.91■■■□□ 2.06
PPP1CB-209ENST00000464273 DCAF8L2P0C7V8 631 aa27.64■■■□□ 2.02
PPP1CB-209ENST00000464273 ZCCHC6Q5VYS8 1495 aaKnown RBP27.52■■■□□ 2
PPP1CB-209ENST00000464273 DCAF1Q9Y4B6 1507 aa27.21■■□□□ 1.95
PPP1CB-209ENST00000464273 NACADO15069 1562 aa27.13■■□□□ 1.93
PPP1CB-209ENST00000464273 MYO15BQ96JP2 1530 aa27.09■■□□□ 1.93
PPP1CB-209ENST00000464273 RB1CC1Q8TDY2 1594 aa27.01■■□□□ 1.92
PPP1CB-209ENST00000464273 SHROOM4Q9ULL8 1493 aa26.62■■□□□ 1.85
PPP1CB-209ENST00000464273 SCRIBQ14160 1630 aa26.55■■□□□ 1.84
PPP1CB-209ENST00000464273 PABPN1Q86U42 306 aaKnown RBP eCLIP26.31■■□□□ 1.8
PPP1CB-209ENST00000464273 UNC13AQ9UPW8 1703 aa26.31■■□□□ 1.8
PPP1CB-209ENST00000464273 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
PPP1CB-209ENST00000464273 CECR2Q9BXF3 1484 aa25.65■■□□□ 1.7
PPP1CB-209ENST00000464273 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
PPP1CB-209ENST00000464273 SUPT5HO00267 1087 aaKnown RBP25.43■■□□□ 1.66
PPP1CB-209ENST00000464273 EIF4G1Q04637 1599 aaKnown RBP25.43■■□□□ 1.66
PPP1CB-209ENST00000464273 MROH2BQ7Z745 1585 aa25.43■■□□□ 1.66
PPP1CB-209ENST00000464273 SMARCA4P51532 1647 aa25.4■■□□□ 1.66
PPP1CB-209ENST00000464273 RSF1Q96T23 1441 aaPredicted RBP25.39■■□□□ 1.66
PPP1CB-209ENST00000464273 CC2D2AQ9P2K1 1620 aa25.19■■□□□ 1.62
PPP1CB-209ENST00000464273 ATAD2BQ9ULI0 1458 aa25.17■■□□□ 1.62
PPP1CB-209ENST00000464273 WIZO95785 1651 aa25.17■■□□□ 1.62
PPP1CB-209ENST00000464273 SMARCA2P51531 1590 aa25.14■■□□□ 1.61
PPP1CB-209ENST00000464273 DNAJC5BQ9UF47 199 aa25.12■■□□□ 1.61
PPP1CB-209ENST00000464273 PEG3Q9GZU2 1588 aa25.08■■□□□ 1.61
PPP1CB-209ENST00000464273 NCAPD3P42695 1498 aa25.06■■□□□ 1.6
PPP1CB-209ENST00000464273 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
PPP1CB-209ENST00000464273 TOP2AP11388 1531 aaKnown RBP24.91■■□□□ 1.58
PPP1CB-209ENST00000464273 HMGXB3Q12766 1538 aa24.91■■□□□ 1.58
PPP1CB-209ENST00000464273 CCDC88BA6NC98 1476 aa24.7■■□□□ 1.54
PPP1CB-209ENST00000464273 CADPSQ9ULU8 1353 aa24.42■■□□□ 1.5
PPP1CB-209ENST00000464273 CFTRP13569 1480 aa24.33■■□□□ 1.49
PPP1CB-209ENST00000464273 NESP48681 1621 aa24.31■■□□□ 1.48
PPP1CB-209ENST00000464273 LAMC3Q9Y6N6 1575 aa24.25■■□□□ 1.47
PPP1CB-209ENST00000464273 PDS5BQ9NTI5 1447 aa24.18■■□□□ 1.46
PPP1CB-209ENST00000464273 FANCD2Q9BXW9 1451 aa24.11■■□□□ 1.45
PPP1CB-209ENST00000464273 PRDM2Q13029 1718 aa24.05■■□□□ 1.44
PPP1CB-209ENST00000464273 ERCC6Q03468 1493 aa24.03■■□□□ 1.44
PPP1CB-209ENST00000464273 CHIC1Q5VXU3 224 aa24.02■■□□□ 1.44
PPP1CB-209ENST00000464273 CEP164Q9UPV0 1460 aa24■■□□□ 1.43
PPP1CB-209ENST00000464273 TRIM41Q8WV44 630 aa23.97■■□□□ 1.43
PPP1CB-209ENST00000464273 ABCC8Q09428 1581 aa23.95■■□□□ 1.43
PPP1CB-209ENST00000464273 WRNQ14191 1432 aaPredicted RBP eCLIP23.94■■□□□ 1.42
PPP1CB-209ENST00000464273 KIF21AQ7Z4S6 1674 aa23.92■■□□□ 1.42
PPP1CB-209ENST00000464273 MRC2Q9UBG0 1479 aa23.83■■□□□ 1.41
PPP1CB-209ENST00000464273 CUX1P39880 1505 aa23.8■■□□□ 1.4
PPP1CB-209ENST00000464273 URB2Q14146 1524 aaKnown RBP23.79■■□□□ 1.4
PPP1CB-209ENST00000464273 TOPBP1Q92547 1522 aa23.77■■□□□ 1.4
PPP1CB-209ENST00000464273 SYNJ1O43426 1573 aa23.77■■□□□ 1.4
PPP1CB-209ENST00000464273 DNMBPQ6XZF7 1577 aa23.75■■□□□ 1.39
PPP1CB-209ENST00000464273 TOP2BQ02880 1626 aa23.73■■□□□ 1.39
PPP1CB-209ENST00000464273 BIVM-ERCC5R4GMW8 1640 aa23.67■■□□□ 1.38
PPP1CB-209ENST00000464273 WDR62O43379 1518 aa23.67■■□□□ 1.38
PPP1CB-209ENST00000464273 THOC2Q8NI27 1593 aaKnown RBP23.66■■□□□ 1.38
PPP1CB-209ENST00000464273 FGD5Q6ZNL6 1462 aa23.65■■□□□ 1.38
PPP1CB-209ENST00000464273 SOGA1O94964 1423 aa23.62■■□□□ 1.37
PPP1CB-209ENST00000464273 POLA1P09884 1462 aaPredicted RBP23.6■■□□□ 1.37
PPP1CB-209ENST00000464273 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
PPP1CB-209ENST00000464273 FAM9AQ8IZU1 332 aaPredicted RBP23.52■■□□□ 1.36
PPP1CB-209ENST00000464273 CUX2O14529 1486 aa23.5■■□□□ 1.35
PPP1CB-209ENST00000464273 IFT140Q96RY7 1462 aa23.49■■□□□ 1.35
PPP1CB-209ENST00000464273 ABCA10Q8WWZ4 1543 aa23.43■■□□□ 1.34
PPP1CB-209ENST00000464273 TDRD9Q8NDG6 1382 aaKnown RBP23.42■■□□□ 1.34
PPP1CB-209ENST00000464273 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
PPP1CB-209ENST00000464273 TARBP1Q13395 1621 aaKnown RBP23.39■■□□□ 1.33
PPP1CB-209ENST00000464273 RUSC2Q8N2Y8 1516 aa23.38■■□□□ 1.33
PPP1CB-209ENST00000464273 CSRNP3Q8WYN3 585 aa23.36■■□□□ 1.33
PPP1CB-209ENST00000464273 EEA1Q15075 1411 aa23.34■■□□□ 1.33
PPP1CB-209ENST00000464273 AQRO60306 1485 aaKnown RBP eCLIP23.34■■□□□ 1.333e-8■■■■□ 22.3
PPP1CB-209ENST00000464273 ZNF608Q9ULD9 1512 aaPredicted RBP23.33■■□□□ 1.33
PPP1CB-209ENST00000464273 GAPVD1Q14C86 1478 aa23.31■■□□□ 1.32
PPP1CB-209ENST00000464273 IGF1RP08069 1367 aa23.27■■□□□ 1.31
PPP1CB-209ENST00000464273 WDR97A6NE52 1622 aa23.26■■□□□ 1.31
PPP1CB-209ENST00000464273 EHMT2Q96KQ7 1210 aa23.21■■□□□ 1.31
PPP1CB-209ENST00000464273 ABCA5Q8WWZ7 1642 aa23.2■■□□□ 1.3
PPP1CB-209ENST00000464273 GRIN2BQ13224 1484 aa23.2■■□□□ 1.3
PPP1CB-209ENST00000464273 EIF4G3O43432 1585 aaKnown RBP23.17■■□□□ 1.3
PPP1CB-209ENST00000464273 CARMIL1Q5VZK9 1371 aa23.16■■□□□ 1.3
PPP1CB-209ENST00000464273 ERICH3Q5RHP9 1530 aa23.14■■□□□ 1.3
PPP1CB-209ENST00000464273 LOC105371045A0A1W2PR82 267 aa23.12■■□□□ 1.29
PPP1CB-209ENST00000464273 FBLN2P98095 1184 aa23.1■■□□□ 1.29
PPP1CB-209ENST00000464273 PBRM1Q86U86 1689 aa23.09■■□□□ 1.29
PPP1CB-209ENST00000464273 CHMP7Q8WUX9 453 aaPredicted RBP23.08■■□□□ 1.29
PPP1CB-209ENST00000464273 SNAPC4Q5SXM2 1469 aa23.08■■□□□ 1.29
PPP1CB-209ENST00000464273 UBTFP17480 764 aaKnown RBP23.07■■□□□ 1.28
PPP1CB-209ENST00000464273 FHAD1B1AJZ9 1412 aa23.06■■□□□ 1.28
PPP1CB-209ENST00000464273 PRXQ9BXM0 1461 aa23.05■■□□□ 1.28
PPP1CB-209ENST00000464273 MAGI1Q96QZ7 1491 aaPredicted RBP23.04■■□□□ 1.28
PPP1CB-209ENST00000464273 RAPGEF2Q9Y4G8 1499 aa23.04■■□□□ 1.28
PPP1CB-209ENST00000464273 CUL7Q14999 1698 aa23.02■■□□□ 1.28
PPP1CB-209ENST00000464273 GOLGA3Q08378 1498 aa22.98■■□□□ 1.27
PPP1CB-209ENST00000464273 KIF21BO75037 1637 aa22.97■■□□□ 1.27
PPP1CB-209ENST00000464273 SYNJ2O15056 1496 aa22.96■■□□□ 1.27
PPP1CB-209ENST00000464273 ADAMTS12P58397 1594 aa22.96■■□□□ 1.27
PPP1CB-209ENST00000464273 GRIN2AQ12879 1464 aa22.88■■□□□ 1.25
PPP1CB-209ENST00000464273 RANGAP1P46060 587 aaPredicted RBP22.85■■□□□ 1.25
PPP1CB-209ENST00000464273 TNIKQ9UKE5 1360 aa22.84■■□□□ 1.25
PPP1CB-209ENST00000464273 OSCARQ8IYS5 282 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms