RNA–Protein interactions for RNA: ENST00000325942.10

FRAS1-201, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene FRAS1, Length 7,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-201ENST00000325942 DCAF8L2P0C7V8 631 aa17.33■□□□□ 0.36
FRAS1-201ENST00000325942 EHMT2Q96KQ7 1210 aa16.22■□□□□ 0.19
FRAS1-201ENST00000325942 SUPT5HO00267 1087 aaKnown RBP15.57■□□□□ 0.08
FRAS1-201ENST00000325942 TTBK1Q5TCY1 1321 aaPredicted RBP15.51■□□□□ 0.07
FRAS1-201ENST00000325942 RANGAP1P46060 587 aaPredicted RBP15.44■□□□□ 0.06
FRAS1-201ENST00000325942 ATP1B4Q9UN42 357 aaPredicted RBP15.34■□□□□ 0.05
FRAS1-201ENST00000325942 SHROOM4Q9ULL8 1493 aa15.33■□□□□ 0.04
FRAS1-201ENST00000325942 FAM9AQ8IZU1 332 aaPredicted RBP15.28■□□□□ 0.04
FRAS1-201ENST00000325942 CHIC1Q5VXU3 224 aa15.23■□□□□ 0.03
FRAS1-201ENST00000325942 APLP2Q06481 763 aa15.17■□□□□ 0.02
FRAS1-201ENST00000325942 MYT1LQ9UL68 1186 aa15.12■□□□□ 0.01
FRAS1-201ENST00000325942 PELP1Q8IZL8 1130 aaKnown RBP14.96□□□□□ -0.02
FRAS1-201ENST00000325942 ERICH6Q7L0X2 663 aa14.85□□□□□ -0.03
FRAS1-201ENST00000325942 CNGB1Q14028 1251 aaPredicted RBP14.76□□□□□ -0.05
FRAS1-201ENST00000325942 SLC4A1APQ9BWU0 796 aaKnown RBP14.74□□□□□ -0.05
FRAS1-201ENST00000325942 POLR3GLQ9BT43 218 aa14.71□□□□□ -0.05
FRAS1-201ENST00000325942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.66□□□□□ -0.06
FRAS1-201ENST00000325942 HNRNPUL2Q1KMD3 747 aaKnown RBP14.66□□□□□ -0.06
FRAS1-201ENST00000325942 MYT1Q01538 1121 aa14.65□□□□□ -0.06
FRAS1-201ENST00000325942 PCGF6Q9BYE7 350 aa14.63□□□□□ -0.07
FRAS1-201ENST00000325942 PLPPR3Q6T4P5 718 aa14.51□□□□□ -0.09
FRAS1-201ENST00000325942 SLC24A1O60721 1099 aa14.46□□□□□ -0.09
FRAS1-201ENST00000325942 YTHDC1Q96MU7 727 aaKnown RBP14.42□□□□□ -0.1
FRAS1-201ENST00000325942 PPARGC1BQ86YN6 1023 aaKnown RBP14.41□□□□□ -0.1
FRAS1-201ENST00000325942 UBTFP17480 764 aaKnown RBP14.41□□□□□ -0.1
FRAS1-201ENST00000325942 BCL11AQ9H165 835 aa14.4□□□□□ -0.1
FRAS1-201ENST00000325942 ITGAEP38570 1179 aa14.39□□□□□ -0.11
FRAS1-201ENST00000325942 CCER1Q8TC90 406 aaPredicted RBP14.37□□□□□ -0.11
FRAS1-201ENST00000325942 BCANQ96GW7 911 aa14.29□□□□□ -0.12
FRAS1-201ENST00000325942 DAXXQ9UER7 740 aaPredicted RBP14.22□□□□□ -0.13
FRAS1-201ENST00000325942 NEFLP07196 543 aa14.2□□□□□ -0.14
FRAS1-201ENST00000325942 TRIM41Q8WV44 630 aa14.12□□□□□ -0.15
FRAS1-201ENST00000325942 A0A0G2JS52 829 aa14.06□□□□□ -0.16
FRAS1-201ENST00000325942 FBLN2P98095 1184 aa14.05□□□□□ -0.16
FRAS1-201ENST00000325942 CLSPNQ9HAW4 1339 aa14.03□□□□□ -0.16
FRAS1-201ENST00000325942 PLEKHG5O94827 1062 aa14.01□□□□□ -0.17
FRAS1-201ENST00000325942 SCAF1Q9H7N4 1312 aaKnown RBP13.98□□□□□ -0.17
FRAS1-201ENST00000325942 CENPBP07199 599 aaPredicted RBP13.96□□□□□ -0.17
FRAS1-201ENST00000325942 SENP3Q9H4L4 574 aaPredicted RBP13.9□□□□□ -0.18
FRAS1-201ENST00000325942 NISCHQ9Y2I1 1504 aa13.88□□□□□ -0.19
FRAS1-201ENST00000325942 ZNF316A6NFI3 1004 aaPredicted RBP13.86□□□□□ -0.19
FRAS1-201ENST00000325942 ZNF326Q5BKZ1 582 aaKnown RBP13.85□□□□□ -0.19
FRAS1-201ENST00000325942 ARID3CA6NKF2 412 aa13.84□□□□□ -0.19
FRAS1-201ENST00000325942 TRIM52Q96A61 297 aa13.78□□□□□ -0.2
FRAS1-201ENST00000325942 ZBTB47Q9UFB7 747 aaPredicted RBP13.78□□□□□ -0.2
FRAS1-201ENST00000325942 ESF1Q9H501 851 aaKnown RBP13.75□□□□□ -0.21
FRAS1-201ENST00000325942 FAM50AQ14320 339 aaKnown RBP13.74□□□□□ -0.21
FRAS1-201ENST00000325942 ZBTB7CA1YPR0 619 aa13.73□□□□□ -0.21
FRAS1-201ENST00000325942 TULP1O00294 542 aaPredicted RBP13.71□□□□□ -0.21
FRAS1-201ENST00000325942 STAG3Q9UJ98 1225 aa13.67□□□□□ -0.22
FRAS1-201ENST00000325942 NEUROD1Q13562 356 aa13.64□□□□□ -0.23
FRAS1-201ENST00000325942 NCBP3Q53F19 620 aaKnown RBP13.64□□□□□ -0.23
FRAS1-201ENST00000325942 CHGAP10645 457 aaKnown RBP13.63□□□□□ -0.23
FRAS1-201ENST00000325942 CANXP27824 592 aaKnown RBP13.62□□□□□ -0.23
FRAS1-201ENST00000325942 PABPN1Q86U42 306 aaKnown RBP eCLIP13.62□□□□□ -0.23
FRAS1-201ENST00000325942 NEFMP07197 916 aa13.54□□□□□ -0.24
FRAS1-201ENST00000325942 ZNF777Q9ULD5 760 aaPredicted RBP13.52□□□□□ -0.24
FRAS1-201ENST00000325942 C14orf37Q86TY3 774 aa13.51□□□□□ -0.25
FRAS1-201ENST00000325942 ARXQ96QS3 562 aa13.5□□□□□ -0.25
FRAS1-201ENST00000325942 ZEB1P37275 1124 aaPredicted RBP13.46□□□□□ -0.25
FRAS1-201ENST00000325942 HAP1P54257 671 aaPredicted RBP13.46□□□□□ -0.26
FRAS1-201ENST00000325942 P3H3Q8IVL6 736 aa13.45□□□□□ -0.26
FRAS1-201ENST00000325942 RTL5Q5HYW3 569 aaPredicted RBP13.43□□□□□ -0.26
FRAS1-201ENST00000325942 TAOK2Q9UL54 1235 aa13.37□□□□□ -0.27
FRAS1-201ENST00000325942 NPHP1O15259 732 aa13.35□□□□□ -0.27
FRAS1-201ENST00000325942 NPM1P06748 294 aaKnown RBP eCLIP13.33□□□□□ -0.28
FRAS1-201ENST00000325942 NPM2Q86SE8 214 aaKnown RBP13.32□□□□□ -0.28
FRAS1-201ENST00000325942 ARID4BQ4LE39 1312 aaPredicted RBP13.32□□□□□ -0.28
FRAS1-201ENST00000325942 TRHP20396 242 aaPredicted RBP13.31□□□□□ -0.28
FRAS1-201ENST00000325942 LOC105371045A0A1W2PR82 267 aa13.29□□□□□ -0.28
FRAS1-201ENST00000325942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.29□□□□□ -0.286e-7■■□□□ 11.8
FRAS1-201ENST00000325942 CDK11BP21127 795 aaKnown RBP13.28□□□□□ -0.28
FRAS1-201ENST00000325942 CDK11AQ9UQ88 783 aaPredicted RBP13.28□□□□□ -0.28
FRAS1-201ENST00000325942 SALL2Q9Y467 1007 aaPredicted RBP13.28□□□□□ -0.28
FRAS1-201ENST00000325942 LMOD2Q6P5Q4 547 aa13.24□□□□□ -0.29
FRAS1-201ENST00000325942 ABCC9O60706 1549 aa13.22□□□□□ -0.29
FRAS1-201ENST00000325942 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.22□□□□□ -0.29
FRAS1-201ENST00000325942 HSP90AA1P07900 732 aaKnown RBP13.22□□□□□ -0.29
FRAS1-201ENST00000325942 TPRNQ4KMQ1 711 aa13.22□□□□□ -0.29
FRAS1-201ENST00000325942 TRIM26Q12899 539 aaPredicted RBP13.19□□□□□ -0.3
FRAS1-201ENST00000325942 AMER1Q5JTC6 1135 aaPredicted RBP13.16□□□□□ -0.3
FRAS1-201ENST00000325942 CLSTN1O94985 981 aa13.15□□□□□ -0.31
FRAS1-201ENST00000325942 PPP1R15AO75807 674 aaPredicted RBP13.1□□□□□ -0.31
FRAS1-201ENST00000325942 ANP32CO43423 234 aa13.08□□□□□ -0.32
FRAS1-201ENST00000325942 AEBP2Q6ZN18 517 aaPredicted RBP13.06□□□□□ -0.32
FRAS1-201ENST00000325942 ISY1Q9ULR0 285 aaKnown RBP13.04□□□□□ -0.32
FRAS1-201ENST00000325942 DIEXFQ68CQ4 756 aaKnown RBP13.03□□□□□ -0.32
FRAS1-201ENST00000325942 KDM2AQ9Y2K7 1162 aa13.03□□□□□ -0.32
FRAS1-201ENST00000325942 KCNH8Q96L42 1107 aa13.03□□□□□ -0.32
FRAS1-201ENST00000325942 PRM3Q9NNZ6 103 aa13.02□□□□□ -0.33
FRAS1-201ENST00000325942 PPM1GO15355 546 aaPredicted RBP13.01□□□□□ -0.33
FRAS1-201ENST00000325942 HRCP23327 699 aa12.99□□□□□ -0.33
FRAS1-201ENST00000325942 ANO8Q9HCE9 1232 aaPredicted RBP12.98□□□□□ -0.33
FRAS1-201ENST00000325942 SENP3-EIF4A1A0A087X0R7 540 aa12.97□□□□□ -0.33
FRAS1-201ENST00000325942 PHF23Q9BUL5 403 aaPredicted RBP12.97□□□□□ -0.33
FRAS1-201ENST00000325942 ANP32BQ92688 251 aaKnown RBP12.96□□□□□ -0.33
FRAS1-201ENST00000325942 CCDC9Q9Y3X0 531 aaKnown RBP12.96□□□□□ -0.33
FRAS1-201ENST00000325942 MLECQ14165 292 aa12.96□□□□□ -0.34
FRAS1-201ENST00000325942 SOX12O15370 315 aa12.94□□□□□ -0.34
FRAS1-201ENST00000325942 CHIC2Q9UKJ5 165 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms