RNA–Protein interactions for RNA: ENST00000555267.1

CALM1-211, Transcript of calmodulin 1, humanhuman

TSL 2

Gene CALM1, Length 554 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM1-211ENST00000555267 AEBP2Q6ZN18 517 aaPredicted RBP29.72■■■□□ 2.35
CALM1-211ENST00000555267 CHIC1Q5VXU3 224 aa28.04■■■□□ 2.08
CALM1-211ENST00000555267 SENP3Q9H4L4 574 aaPredicted RBP25.29■■□□□ 1.64
CALM1-211ENST00000555267 PHF23Q9BUL5 403 aaPredicted RBP24.99■■□□□ 1.59
CALM1-211ENST00000555267 FOXD1Q16676 465 aa23.64■■□□□ 1.37
CALM1-211ENST00000555267 PLPPR3Q6T4P5 718 aa22.31■■□□□ 1.16
CALM1-211ENST00000555267 MSH5O43196 834 aa22.11■■□□□ 1.13
CALM1-211ENST00000555267 PPP6R1Q9UPN7 881 aa22.04■■□□□ 1.12
CALM1-211ENST00000555267 PIAS4Q8N2W9 510 aaPredicted RBP22.03■■□□□ 1.12
CALM1-211ENST00000555267 ADRA2BP18089 450 aa21.94■■□□□ 1.1
CALM1-211ENST00000555267 POTEDQ86YR6 584 aa21.88■■□□□ 1.09
CALM1-211ENST00000555267 MAPK8IP2Q13387 824 aaPredicted RBP20.22■□□□□ 0.83
CALM1-211ENST00000555267 DMRT2Q9Y5R5 561 aa20.06■□□□□ 0.8
CALM1-211ENST00000555267 SCAF1Q9H7N4 1312 aaKnown RBP19.99■□□□□ 0.79
CALM1-211ENST00000555267 PPP4R3CPQ6ZMV5 832 aa19.58■□□□□ 0.72
CALM1-211ENST00000555267 HOXD11P31277 338 aaPredicted RBP19.27■□□□□ 0.68
CALM1-211ENST00000555267 DCAF8L1A6NGE4 600 aa19.23■□□□□ 0.67
CALM1-211ENST00000555267 CNKSR2Q8WXI2 1034 aa19.21■□□□□ 0.67
CALM1-211ENST00000555267 CACNB1Q02641 598 aaPredicted RBP19.09■□□□□ 0.65
CALM1-211ENST00000555267 RNF216Q9NWF9 866 aaPredicted RBP19.07■□□□□ 0.64
CALM1-211ENST00000555267 RNF39Q9H2S5 420 aa18.89■□□□□ 0.61
CALM1-211ENST00000555267 NCBP3Q53F19 620 aaKnown RBP18.72■□□□□ 0.59
CALM1-211ENST00000555267 C1QBPQ07021 282 aaKnown RBP18.58■□□□□ 0.56
CALM1-211ENST00000555267 DNAJC5BQ9UF47 199 aa18.58■□□□□ 0.56
CALM1-211ENST00000555267 NPM3O75607 178 aaKnown RBP18.51■□□□□ 0.55
CALM1-211ENST00000555267 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.34■□□□□ 0.531e-7■■□□□ 12.4
CALM1-211ENST00000555267 KCNA4P22459 653 aa18.05■□□□□ 0.48
CALM1-211ENST00000555267 U3KPZ7 1027 aaPredicted RBP17.98■□□□□ 0.47
CALM1-211ENST00000555267 SPINK5Q9NQ38 1064 aaPredicted RBP17.77■□□□□ 0.44
CALM1-211ENST00000555267 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
CALM1-211ENST00000555267 CAPN15O75808 1086 aa17.7■□□□□ 0.42
CALM1-211ENST00000555267 DSG3P32926 999 aa17.66■□□□□ 0.42
CALM1-211ENST00000555267 TRHP20396 242 aaPredicted RBP17.41■□□□□ 0.38
CALM1-211ENST00000555267 APLP2Q06481 763 aa17.35■□□□□ 0.37
CALM1-211ENST00000555267 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.32■□□□□ 0.36
CALM1-211ENST00000555267 ABCB7O75027 752 aa17.32■□□□□ 0.36
CALM1-211ENST00000555267 HNRNPUL2Q1KMD3 747 aaKnown RBP17.32■□□□□ 0.36
CALM1-211ENST00000555267 ZNF219Q9P2Y4 722 aaPredicted RBP17.32■□□□□ 0.36
CALM1-211ENST00000555267 SAMD1Q6SPF0 538 aaPredicted RBP17.24■□□□□ 0.35
CALM1-211ENST00000555267 POTEHQ6S545 545 aa17.1■□□□□ 0.33
CALM1-211ENST00000555267 MYCNP04198 464 aaPredicted RBP17.08■□□□□ 0.32
CALM1-211ENST00000555267 SLC4A1APQ9BWU0 796 aaKnown RBP16.98■□□□□ 0.31
CALM1-211ENST00000555267 POLA2Q14181 598 aa16.91■□□□□ 0.3
CALM1-211ENST00000555267 FOXD4L1Q9NU39 408 aa16.85■□□□□ 0.29
CALM1-211ENST00000555267 RBM42Q9BTD8 480 aaKnown RBP16.79■□□□□ 0.28
CALM1-211ENST00000555267 ATF5Q9Y2D1 282 aaPredicted RBP16.79■□□□□ 0.28
CALM1-211ENST00000555267 ZBTB22O15209 634 aa16.61■□□□□ 0.25
CALM1-211ENST00000555267 CHRDL2Q6WN34 429 aa16.51■□□□□ 0.23
CALM1-211ENST00000555267 ZBTB12Q9Y330 459 aaPredicted RBP16.47■□□□□ 0.23
CALM1-211ENST00000555267 AKT1S1Q96B36 256 aa16.4■□□□□ 0.22
CALM1-211ENST00000555267 OSCARQ8IYS5 282 aa16.37■□□□□ 0.21
CALM1-211ENST00000555267 ATXN8OSP0DMR3 200 aa16.32■□□□□ 0.2
CALM1-211ENST00000555267 REM2Q8IYK8 340 aaPredicted RBP16.28■□□□□ 0.2
CALM1-211ENST00000555267 PIP4P2Q8N4L2 257 aa16.11■□□□□ 0.17
CALM1-211ENST00000555267 PITPNM1O00562 1244 aa16.1■□□□□ 0.17
CALM1-211ENST00000555267 FBLN2P98095 1184 aa16.04■□□□□ 0.16
CALM1-211ENST00000555267 FXR2P51116 673 aaKnown RBP eCLIP16■□□□□ 0.15
CALM1-211ENST00000555267 SPDYE2BA6NHP3 402 aa15.99■□□□□ 0.15
CALM1-211ENST00000555267 SPDYE6P0CI01 402 aa15.99■□□□□ 0.15
CALM1-211ENST00000555267 MKRN4PQ13434 485 aaPredicted RBP15.99■□□□□ 0.15
CALM1-211ENST00000555267 SPDYE2Q495Y8 402 aa15.99■□□□□ 0.15
CALM1-211ENST00000555267 SP7Q8TDD2 431 aaPredicted RBP15.96■□□□□ 0.15
CALM1-211ENST00000555267 HAX1O00165 279 aa15.85■□□□□ 0.13
CALM1-211ENST00000555267 ZNF692Q9BU19 519 aaPredicted RBP15.8■□□□□ 0.12
CALM1-211ENST00000555267 SSUH2Q9Y2M2 353 aa15.79■□□□□ 0.12
CALM1-211ENST00000555267 CLEC11AQ9Y240 323 aa15.76■□□□□ 0.11
CALM1-211ENST00000555267 SPDYE1Q8NFV5 336 aaPredicted RBP15.75■□□□□ 0.11
CALM1-211ENST00000555267 CSRNP3Q8WYN3 585 aa15.73■□□□□ 0.11
CALM1-211ENST00000555267 EVX2Q03828 476 aa15.71■□□□□ 0.11
CALM1-211ENST00000555267 PRKAR2AP13861 404 aaKnown RBP15.68■□□□□ 0.1
CALM1-211ENST00000555267 EHMT2Q96KQ7 1210 aa15.66■□□□□ 0.1
CALM1-211ENST00000555267 PABPN1Q86U42 306 aaKnown RBP eCLIP15.58■□□□□ 0.08
CALM1-211ENST00000555267 CHADLQ6NUI6 762 aa15.51■□□□□ 0.07
CALM1-211ENST00000555267 C19orf67A6NJJ6 358 aa15.48■□□□□ 0.07
CALM1-211ENST00000555267 PRR29P0C7W0 189 aa15.47■□□□□ 0.07
CALM1-211ENST00000555267 GABBR2O75899 941 aa15.3■□□□□ 0.04
CALM1-211ENST00000555267 FARP1Q9Y4F1 1045 aaPredicted RBP15.23■□□□□ 0.03
CALM1-211ENST00000555267 CD44P16070 742 aaKnown RBP15.17■□□□□ 0.02
CALM1-211ENST00000555267 SPDYE4A6NLX3 237 aa15.12■□□□□ 0.01
CALM1-211ENST00000555267 CREBZFQ9NS37 354 aa15.08■□□□□ 0
CALM1-211ENST00000555267 STAG3Q9UJ98 1225 aa15.07■□□□□ 0
CALM1-211ENST00000555267 POTEIP0CG38 1075 aa15.01□□□□□ -0.01
CALM1-211ENST00000555267 LHX8Q68G74 356 aa14.98□□□□□ -0.01
CALM1-211ENST00000555267 ZRANB1Q9UGI0 708 aa14.94□□□□□ -0.02
CALM1-211ENST00000555267 CLCN6P51797 869 aa14.93□□□□□ -0.02
CALM1-211ENST00000555267 ZNF579Q8NAF0 562 aaKnown RBP14.92□□□□□ -0.02
CALM1-211ENST00000555267 DCBLD2Q96PD2 775 aa14.82□□□□□ -0.04
CALM1-211ENST00000555267 MNX1P50219 401 aaPredicted RBP14.81□□□□□ -0.04
CALM1-211ENST00000555267 GALR2O43603 387 aaPredicted RBP14.79□□□□□ -0.04
CALM1-211ENST00000555267 NPM1P06748 294 aaKnown RBP eCLIP14.74□□□□□ -0.05
CALM1-211ENST00000555267 PROM2Q8N271 834 aa14.74□□□□□ -0.05
CALM1-211ENST00000555267 PHF12Q96QT6 1004 aa14.74□□□□□ -0.05
CALM1-211ENST00000555267 PAK3O75914 559 aaPredicted RBP14.73□□□□□ -0.05
CALM1-211ENST00000555267 PELP1Q8IZL8 1130 aaKnown RBP14.54□□□□□ -0.08
CALM1-211ENST00000555267 MS4A3Q96HJ5 214 aa14.54□□□□□ -0.08
CALM1-211ENST00000555267 POTEB2H3BUK9 544 aa14.53□□□□□ -0.08
CALM1-211ENST00000555267 TSPYL2Q9H2G4 693 aaPredicted RBP14.53□□□□□ -0.08
CALM1-211ENST00000555267 OTUD5Q96G74 571 aa14.46□□□□□ -0.09
CALM1-211ENST00000555267 CCDC61Q9Y6R9 512 aa14.46□□□□□ -0.09
CALM1-211ENST00000555267 ASTLQ6HA08 431 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms