RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 DCAF8L2P0C7V8 631 aa26.29■■□□□ 1.8
TRIO-222ENST00000515144 SUPT5HO00267 1087 aaKnown RBP24.22■■□□□ 1.47
TRIO-222ENST00000515144 SHROOM4Q9ULL8 1493 aa24.16■■□□□ 1.46
TRIO-222ENST00000515144 EHMT2Q96KQ7 1210 aa24.15■■□□□ 1.46
TRIO-222ENST00000515144 NISCHQ9Y2I1 1504 aa24.13■■□□□ 1.45
TRIO-222ENST00000515144 TTBK1Q5TCY1 1321 aaPredicted RBP23.14■■□□□ 1.29
TRIO-222ENST00000515144 RANGAP1P46060 587 aaPredicted RBP23.09■■□□□ 1.29
TRIO-222ENST00000515144 FAM9AQ8IZU1 332 aaPredicted RBP23.03■■□□□ 1.28
TRIO-222ENST00000515144 APLP2Q06481 763 aa22.89■■□□□ 1.25
TRIO-222ENST00000515144 ATP1B4Q9UN42 357 aaPredicted RBP22.85■■□□□ 1.25
TRIO-222ENST00000515144 PCGF6Q9BYE7 350 aa22.24■■□□□ 1.15
TRIO-222ENST00000515144 TRIM41Q8WV44 630 aa22.23■■□□□ 1.15
TRIO-222ENST00000515144 UBTFP17480 764 aaKnown RBP22.23■■□□□ 1.15
TRIO-222ENST00000515144 MYT1LQ9UL68 1186 aa22.14■■□□□ 1.13
TRIO-222ENST00000515144 PPARGC1BQ86YN6 1023 aaKnown RBP22.06■■□□□ 1.12
TRIO-222ENST00000515144 CHIC1Q5VXU3 224 aa22.06■■□□□ 1.12
TRIO-222ENST00000515144 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.97■■□□□ 1.11
TRIO-222ENST00000515144 HNRNPUL2Q1KMD3 747 aaKnown RBP21.97■■□□□ 1.11
TRIO-222ENST00000515144 CCER1Q8TC90 406 aaPredicted RBP21.85■■□□□ 1.09
TRIO-222ENST00000515144 PELP1Q8IZL8 1130 aaKnown RBP21.84■■□□□ 1.09
TRIO-222ENST00000515144 ABCC9O60706 1549 aa21.78■■□□□ 1.08
TRIO-222ENST00000515144 ITGAEP38570 1179 aa21.76■■□□□ 1.07
TRIO-222ENST00000515144 PABPN1Q86U42 306 aaKnown RBP eCLIP21.75■■□□□ 1.07
TRIO-222ENST00000515144 POLR3GLQ9BT43 218 aa21.63■■□□□ 1.05
TRIO-222ENST00000515144 CNGB1Q14028 1251 aaPredicted RBP21.6■■□□□ 1.05
TRIO-222ENST00000515144 YTHDC1Q96MU7 727 aaKnown RBP21.46■■□□□ 1.03
TRIO-222ENST00000515144 SLC4A1APQ9BWU0 796 aaKnown RBP21.46■■□□□ 1.03
TRIO-222ENST00000515144 FBLN2P98095 1184 aa21.38■■□□□ 1.01
TRIO-222ENST00000515144 ERICH6Q7L0X2 663 aa21.32■■□□□ 1
TRIO-222ENST00000515144 LOC105371045A0A1W2PR82 267 aa21.27■□□□□ 0.99
TRIO-222ENST00000515144 CENPBP07199 599 aaPredicted RBP21.11■□□□□ 0.97
TRIO-222ENST00000515144 ZEB1P37275 1124 aaPredicted RBP21.08■□□□□ 0.97
TRIO-222ENST00000515144 PLPPR3Q6T4P5 718 aa21.08■□□□□ 0.96
TRIO-222ENST00000515144 FAM50AQ14320 339 aaKnown RBP21.07■□□□□ 0.96
TRIO-222ENST00000515144 NEFLP07196 543 aa21.06■□□□□ 0.96
TRIO-222ENST00000515144 ARID3CA6NKF2 412 aa21.05■□□□□ 0.96
TRIO-222ENST00000515144 BCANQ96GW7 911 aa20.94■□□□□ 0.94
TRIO-222ENST00000515144 TRIM52Q96A61 297 aa20.92■□□□□ 0.94
TRIO-222ENST00000515144 SCRIBQ14160 1630 aa20.86■□□□□ 0.93
TRIO-222ENST00000515144 P3H3Q8IVL6 736 aa20.86■□□□□ 0.93
TRIO-222ENST00000515144 TRIM26Q12899 539 aaPredicted RBP20.85■□□□□ 0.93
TRIO-222ENST00000515144 SLC24A1O60721 1099 aa20.84■□□□□ 0.93
TRIO-222ENST00000515144 NEUROD1Q13562 356 aa20.8■□□□□ 0.92
TRIO-222ENST00000515144 ZNF326Q5BKZ1 582 aaKnown RBP20.8■□□□□ 0.92
TRIO-222ENST00000515144 BCL11AQ9H165 835 aa20.69■□□□□ 0.9
TRIO-222ENST00000515144 ZNF777Q9ULD5 760 aaPredicted RBP20.64■□□□□ 0.89
TRIO-222ENST00000515144 DAXXQ9UER7 740 aaPredicted RBP20.63■□□□□ 0.89
TRIO-222ENST00000515144 ESF1Q9H501 851 aaKnown RBP20.5■□□□□ 0.87
TRIO-222ENST00000515144 CLSPNQ9HAW4 1339 aa20.48■□□□□ 0.87
TRIO-222ENST00000515144 SENP3Q9H4L4 574 aaPredicted RBP20.47■□□□□ 0.87
TRIO-222ENST00000515144 HRCP23327 699 aa20.43■□□□□ 0.86
TRIO-222ENST00000515144 MYT1Q01538 1121 aa20.43■□□□□ 0.86
TRIO-222ENST00000515144 CHGAP10645 457 aaKnown RBP20.42■□□□□ 0.86
TRIO-222ENST00000515144 STAG3Q9UJ98 1225 aa20.4■□□□□ 0.86
TRIO-222ENST00000515144 NPM1P06748 294 aaKnown RBP eCLIP20.34■□□□□ 0.85
TRIO-222ENST00000515144 PLEKHG5O94827 1062 aa20.34■□□□□ 0.85
TRIO-222ENST00000515144 SCAF1Q9H7N4 1312 aaKnown RBP20.29■□□□□ 0.84
TRIO-222ENST00000515144 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.24■□□□□ 0.837e-7■■■□□ 14.7
TRIO-222ENST00000515144 DIEXFQ68CQ4 756 aaKnown RBP20.18■□□□□ 0.82
TRIO-222ENST00000515144 A0A0G2JS52 829 aa20.18■□□□□ 0.82
TRIO-222ENST00000515144 ZNF316A6NFI3 1004 aaPredicted RBP20.17■□□□□ 0.82
TRIO-222ENST00000515144 ZBTB47Q9UFB7 747 aaPredicted RBP20.14■□□□□ 0.81
TRIO-222ENST00000515144 CHMP7Q8WUX9 453 aaPredicted RBP20.13■□□□□ 0.81
TRIO-222ENST00000515144 CANXP27824 592 aaKnown RBP20.12■□□□□ 0.81
TRIO-222ENST00000515144 NEFMP07197 916 aa20.1■□□□□ 0.81
TRIO-222ENST00000515144 CCDC180Q9P1Z9 1646 aa20.1■□□□□ 0.81
TRIO-222ENST00000515144 CDK11AQ9UQ88 783 aaPredicted RBP20.09■□□□□ 0.81
TRIO-222ENST00000515144 CHIC2Q9UKJ5 165 aa20.07■□□□□ 0.8
TRIO-222ENST00000515144 KCNH8Q96L42 1107 aa20.06■□□□□ 0.8
TRIO-222ENST00000515144 ANP32CO43423 234 aa20.06■□□□□ 0.8
TRIO-222ENST00000515144 ZBTB7CA1YPR0 619 aa20.04■□□□□ 0.8
TRIO-222ENST00000515144 CSRNP3Q8WYN3 585 aa20.02■□□□□ 0.8
TRIO-222ENST00000515144 RB1CC1Q8TDY2 1594 aa20.02■□□□□ 0.8
TRIO-222ENST00000515144 ARID4BQ4LE39 1312 aaPredicted RBP19.98■□□□□ 0.79
TRIO-222ENST00000515144 ERCC6Q03468 1493 aa19.96■□□□□ 0.79
TRIO-222ENST00000515144 KDM2AQ9Y2K7 1162 aa19.93■□□□□ 0.78
TRIO-222ENST00000515144 SALL2Q9Y467 1007 aaPredicted RBP19.93■□□□□ 0.78
TRIO-222ENST00000515144 C14orf37Q86TY3 774 aa19.92■□□□□ 0.78
TRIO-222ENST00000515144 TRHP20396 242 aaPredicted RBP19.91■□□□□ 0.78
TRIO-222ENST00000515144 ZCCHC6Q5VYS8 1495 aaKnown RBP19.76■□□□□ 0.75
TRIO-222ENST00000515144 PPP1R15AO75807 674 aaPredicted RBP19.73■□□□□ 0.75
TRIO-222ENST00000515144 TSPY4P0CV99 314 aa19.72■□□□□ 0.75
TRIO-222ENST00000515144 TSPY10P0CW01 314 aa19.72■□□□□ 0.75
TRIO-222ENST00000515144 HAP1P54257 671 aaPredicted RBP19.72■□□□□ 0.75
TRIO-222ENST00000515144 TONSLQ96HA7 1378 aa19.71■□□□□ 0.75
TRIO-222ENST00000515144 RTL5Q5HYW3 569 aaPredicted RBP19.71■□□□□ 0.75
TRIO-222ENST00000515144 MTUS2Q5JR59 1369 aa19.69■□□□□ 0.74
TRIO-222ENST00000515144 RRP7BPQ9NSQ0 103 aa19.67■□□□□ 0.74
TRIO-222ENST00000515144 HIRIP3Q9BW71 556 aaPredicted RBP19.66■□□□□ 0.74
TRIO-222ENST00000515144 FAM9BQ8IZU0 186 aa19.66■□□□□ 0.74
TRIO-222ENST00000515144 BAZ1BQ9UIG0 1483 aaKnown RBP19.64■□□□□ 0.73
TRIO-222ENST00000515144 RGL3Q3MIN7 710 aa19.63■□□□□ 0.73
TRIO-222ENST00000515144 ARXQ96QS3 562 aa19.63■□□□□ 0.73
TRIO-222ENST00000515144 NPM2Q86SE8 214 aaKnown RBP19.61■□□□□ 0.73
TRIO-222ENST00000515144 MLECQ14165 292 aa19.61■□□□□ 0.73
TRIO-222ENST00000515144 LMOD2Q6P5Q4 547 aa19.59■□□□□ 0.73
TRIO-222ENST00000515144 DDX10Q13206 875 aaKnown RBP19.57■□□□□ 0.72
TRIO-222ENST00000515144 TMC1Q8TDI8 760 aa19.57■□□□□ 0.72
TRIO-222ENST00000515144 EIF4G1Q04637 1599 aaKnown RBP19.56■□□□□ 0.72
TRIO-222ENST00000515144 SENP3-EIF4A1A0A087X0R7 540 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms