RNA–Protein interactions for RNA: ENST00000304992.10

PRPF8-201, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF8, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-201ENST00000304992 DCAF8L2P0C7V8 631 aa18.2■□□□□ 0.5
PRPF8-201ENST00000304992 SUPT5HO00267 1087 aaKnown RBP16.95■□□□□ 0.3
PRPF8-201ENST00000304992 SHROOM4Q9ULL8 1493 aa16.71■□□□□ 0.27
PRPF8-201ENST00000304992 EHMT2Q96KQ7 1210 aa16.7■□□□□ 0.26
PRPF8-201ENST00000304992 NISCHQ9Y2I1 1504 aa16.63■□□□□ 0.25
PRPF8-201ENST00000304992 APLP2Q06481 763 aa16.11■□□□□ 0.17
PRPF8-201ENST00000304992 FAM9AQ8IZU1 332 aaPredicted RBP16.08■□□□□ 0.16
PRPF8-201ENST00000304992 TTBK1Q5TCY1 1321 aaPredicted RBP16.07■□□□□ 0.16
PRPF8-201ENST00000304992 RANGAP1P46060 587 aaPredicted RBP15.99■□□□□ 0.15
PRPF8-201ENST00000304992 ATP1B4Q9UN42 357 aaPredicted RBP15.83■□□□□ 0.12
PRPF8-201ENST00000304992 PELP1Q8IZL8 1130 aaKnown RBP15.66■□□□□ 0.1
PRPF8-201ENST00000304992 PCGF6Q9BYE7 350 aa15.64■□□□□ 0.09
PRPF8-201ENST00000304992 TRIM41Q8WV44 630 aa15.6■□□□□ 0.09
PRPF8-201ENST00000304992 UBTFP17480 764 aaKnown RBP15.54■□□□□ 0.08
PRPF8-201ENST00000304992 CCER1Q8TC90 406 aaPredicted RBP15.4■□□□□ 0.06
PRPF8-201ENST00000304992 PPARGC1BQ86YN6 1023 aaKnown RBP15.33■□□□□ 0.05
PRPF8-201ENST00000304992 MYT1LQ9UL68 1186 aa15.33■□□□□ 0.04
PRPF8-201ENST00000304992 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.27■□□□□ 0.03
PRPF8-201ENST00000304992 HNRNPUL2Q1KMD3 747 aaKnown RBP15.27■□□□□ 0.03
PRPF8-201ENST00000304992 ITGAEP38570 1179 aa15.16■□□□□ 0.02
PRPF8-201ENST00000304992 ERICH6Q7L0X2 663 aa15.16■□□□□ 0.02
PRPF8-201ENST00000304992 CHIC1Q5VXU3 224 aa15.16■□□□□ 0.02
PRPF8-201ENST00000304992 YTHDC1Q96MU7 727 aaKnown RBP15.11■□□□□ 0.01
PRPF8-201ENST00000304992 CENPBP07199 599 aaPredicted RBP15.11■□□□□ 0.01
PRPF8-201ENST00000304992 POLR3GLQ9BT43 218 aa15.09■□□□□ 0.01
PRPF8-201ENST00000304992 ZEB1P37275 1124 aaPredicted RBP15.08■□□□□ 0
PRPF8-201ENST00000304992 CNGB1Q14028 1251 aaPredicted RBP15.01□□□□□ -0.01
PRPF8-201ENST00000304992 NEFLP07196 543 aa14.98□□□□□ -0.01
PRPF8-201ENST00000304992 PABPN1Q86U42 306 aaKnown RBP eCLIP14.94□□□□□ -0.028e-6■□□□□ 8.9
PRPF8-201ENST00000304992 SLC4A1APQ9BWU0 796 aaKnown RBP14.9□□□□□ -0.02
PRPF8-201ENST00000304992 LOC105371045A0A1W2PR82 267 aa14.87□□□□□ -0.03
PRPF8-201ENST00000304992 ABCC9O60706 1549 aa14.86□□□□□ -0.03
PRPF8-201ENST00000304992 TRIM26Q12899 539 aaPredicted RBP14.77□□□□□ -0.05
PRPF8-201ENST00000304992 FBLN2P98095 1184 aa14.74□□□□□ -0.05
PRPF8-201ENST00000304992 FAM50AQ14320 339 aaKnown RBP14.7□□□□□ -0.06
PRPF8-201ENST00000304992 TRIM52Q96A61 297 aa14.63□□□□□ -0.07
PRPF8-201ENST00000304992 DAXXQ9UER7 740 aaPredicted RBP14.62□□□□□ -0.07
PRPF8-201ENST00000304992 ARID3CA6NKF2 412 aa14.55□□□□□ -0.08
PRPF8-201ENST00000304992 HRCP23327 699 aa14.55□□□□□ -0.08
PRPF8-201ENST00000304992 NEUROD1Q13562 356 aa14.53□□□□□ -0.08
PRPF8-201ENST00000304992 ZNF326Q5BKZ1 582 aaKnown RBP14.53□□□□□ -0.08
PRPF8-201ENST00000304992 BCANQ96GW7 911 aa14.48□□□□□ -0.09
PRPF8-201ENST00000304992 P3H3Q8IVL6 736 aa14.46□□□□□ -0.09
PRPF8-201ENST00000304992 CLSPNQ9HAW4 1339 aa14.45□□□□□ -0.1
PRPF8-201ENST00000304992 SLC24A1O60721 1099 aa14.44□□□□□ -0.1
PRPF8-201ENST00000304992 MYT1Q01538 1121 aa14.41□□□□□ -0.1
PRPF8-201ENST00000304992 PLPPR3Q6T4P5 718 aa14.41□□□□□ -0.1
PRPF8-201ENST00000304992 BCL11AQ9H165 835 aa14.37□□□□□ -0.11
PRPF8-201ENST00000304992 ZNF777Q9ULD5 760 aaPredicted RBP14.35□□□□□ -0.11
PRPF8-201ENST00000304992 DIEXFQ68CQ4 756 aaKnown RBP14.29□□□□□ -0.12
PRPF8-201ENST00000304992 ZNF316A6NFI3 1004 aaPredicted RBP14.28□□□□□ -0.12
PRPF8-201ENST00000304992 ESF1Q9H501 851 aaKnown RBP14.25□□□□□ -0.13
PRPF8-201ENST00000304992 ZBTB47Q9UFB7 747 aaPredicted RBP14.2□□□□□ -0.14
PRPF8-201ENST00000304992 CHGAP10645 457 aaKnown RBP14.2□□□□□ -0.14
PRPF8-201ENST00000304992 ANP32CO43423 234 aa14.17□□□□□ -0.14
PRPF8-201ENST00000304992 STAG3Q9UJ98 1225 aa14.17□□□□□ -0.14
PRPF8-201ENST00000304992 CANXP27824 592 aaKnown RBP14.16□□□□□ -0.14
PRPF8-201ENST00000304992 NEFMP07197 916 aa14.15□□□□□ -0.14
PRPF8-201ENST00000304992 NPM1P06748 294 aaKnown RBP eCLIP14.14□□□□□ -0.15
PRPF8-201ENST00000304992 CSRNP3Q8WYN3 585 aa14.12□□□□□ -0.15
PRPF8-201ENST00000304992 CDK11AQ9UQ88 783 aaPredicted RBP14.11□□□□□ -0.15
PRPF8-201ENST00000304992 SCRIBQ14160 1630 aa14.1□□□□□ -0.15
PRPF8-201ENST00000304992 RTL5Q5HYW3 569 aaPredicted RBP14.1□□□□□ -0.15
PRPF8-201ENST00000304992 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.04□□□□□ -0.163e-7■■□□□ 11.9
PRPF8-201ENST00000304992 SENP3Q9H4L4 574 aaPredicted RBP14.03□□□□□ -0.16
PRPF8-201ENST00000304992 CHIC2Q9UKJ5 165 aa13.99□□□□□ -0.17
PRPF8-201ENST00000304992 SCAF1Q9H7N4 1312 aaKnown RBP13.99□□□□□ -0.17
PRPF8-201ENST00000304992 PLEKHG5O94827 1062 aa13.97□□□□□ -0.17
PRPF8-201ENST00000304992 CHMP7Q8WUX9 453 aaPredicted RBP13.94□□□□□ -0.18
PRPF8-201ENST00000304992 A0A0G2JS52 829 aa13.93□□□□□ -0.18
PRPF8-201ENST00000304992 SALL2Q9Y467 1007 aaPredicted RBP13.91□□□□□ -0.18
PRPF8-201ENST00000304992 GTF3C3Q9Y5Q9 886 aa13.89□□□□□ -0.19
PRPF8-201ENST00000304992 TONSLQ96HA7 1378 aa13.88□□□□□ -0.19
PRPF8-201ENST00000304992 KDM2AQ9Y2K7 1162 aa13.88□□□□□ -0.19
PRPF8-201ENST00000304992 KCNH8Q96L42 1107 aa13.88□□□□□ -0.19
PRPF8-201ENST00000304992 ZBTB7CA1YPR0 619 aa13.86□□□□□ -0.19
PRPF8-201ENST00000304992 TSPY4P0CV99 314 aa13.83□□□□□ -0.19
PRPF8-201ENST00000304992 TSPY10P0CW01 314 aa13.83□□□□□ -0.19
PRPF8-201ENST00000304992 NPM2Q86SE8 214 aaKnown RBP13.83□□□□□ -0.2
PRPF8-201ENST00000304992 FAM9BQ8IZU0 186 aa13.82□□□□□ -0.2
PRPF8-201ENST00000304992 C14orf37Q86TY3 774 aa13.81□□□□□ -0.2
PRPF8-201ENST00000304992 DDX10Q13206 875 aaKnown RBP13.78□□□□□ -0.2
PRPF8-201ENST00000304992 ARID4BQ4LE39 1312 aaPredicted RBP13.78□□□□□ -0.2
PRPF8-201ENST00000304992 MTUS2Q5JR59 1369 aa13.77□□□□□ -0.21
PRPF8-201ENST00000304992 PPP1R15AO75807 674 aaPredicted RBP13.76□□□□□ -0.21
PRPF8-201ENST00000304992 HNRNPUQ00839 825 aaKnown RBP eCLIP13.74□□□□□ -0.21
PRPF8-201ENST00000304992 RRP7BPQ9NSQ0 103 aa13.72□□□□□ -0.21
PRPF8-201ENST00000304992 HSP90AA1P07900 732 aaKnown RBP13.71□□□□□ -0.21
PRPF8-201ENST00000304992 HIRIP3Q9BW71 556 aaPredicted RBP13.71□□□□□ -0.21
PRPF8-201ENST00000304992 TMC1Q8TDI8 760 aa13.71□□□□□ -0.21
PRPF8-201ENST00000304992 ANP32AP39687 249 aaKnown RBP13.69□□□□□ -0.22
PRPF8-201ENST00000304992 WDR43Q15061 677 aaKnown RBP eCLIP13.69□□□□□ -0.223e-6■□□□□ 10.2
PRPF8-201ENST00000304992 HAP1P54257 671 aaPredicted RBP13.68□□□□□ -0.22
PRPF8-201ENST00000304992 RGL3Q3MIN7 710 aa13.67□□□□□ -0.22
PRPF8-201ENST00000304992 FKBP8Q14318 412 aa13.66□□□□□ -0.22
PRPF8-201ENST00000304992 PLEKHD1A6NEE1 506 aa13.66□□□□□ -0.22
PRPF8-201ENST00000304992 ZCCHC6Q5VYS8 1495 aaKnown RBP13.66□□□□□ -0.22
PRPF8-201ENST00000304992 TRHP20396 242 aaPredicted RBP13.62□□□□□ -0.23
PRPF8-201ENST00000304992 ARXQ96QS3 562 aa13.61□□□□□ -0.23
PRPF8-201ENST00000304992 ERCC6Q03468 1493 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms