RNA–Protein interactions for RNA: ENST00000441461.5

PPP1CB-207, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 2

Gene PPP1CB, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-207ENST00000441461 NISCHQ9Y2I1 1504 aa36.87■■■■□ 3.49
PPP1CB-207ENST00000441461 CCDC180Q9P1Z9 1646 aa32.91■■■□□ 2.86
PPP1CB-207ENST00000441461 ABCC9O60706 1549 aa32.12■■■□□ 2.73
PPP1CB-207ENST00000441461 RB1CC1Q8TDY2 1594 aa30.94■■■□□ 2.54
PPP1CB-207ENST00000441461 NACADO15069 1562 aa30.91■■■□□ 2.54
PPP1CB-207ENST00000441461 MYO15BQ96JP2 1530 aa30.77■■■□□ 2.52
PPP1CB-207ENST00000441461 ZCCHC6Q5VYS8 1495 aaKnown RBP30.71■■■□□ 2.51
PPP1CB-207ENST00000441461 DCAF1Q9Y4B6 1507 aa30.57■■■□□ 2.49
PPP1CB-207ENST00000441461 DCAF8L2P0C7V8 631 aa30.57■■■□□ 2.48
PPP1CB-207ENST00000441461 UNC13AQ9UPW8 1703 aa30.34■■■□□ 2.45
PPP1CB-207ENST00000441461 BICRAQ9NZM4 1560 aa30.08■■■□□ 2.41
PPP1CB-207ENST00000441461 PABPN1Q86U42 306 aaKnown RBP eCLIP29.94■■■□□ 2.38
PPP1CB-207ENST00000441461 SCRIBQ14160 1630 aa29.89■■■□□ 2.38
PPP1CB-207ENST00000441461 SHROOM4Q9ULL8 1493 aa29.77■■■□□ 2.36
PPP1CB-207ENST00000441461 DNAJC5BQ9UF47 199 aa29.61■■■□□ 2.33
PPP1CB-207ENST00000441461 EIF4G1Q04637 1599 aaKnown RBP29.24■■■□□ 2.27
PPP1CB-207ENST00000441461 CC2D2AQ9P2K1 1620 aa29.13■■■□□ 2.25
PPP1CB-207ENST00000441461 CECR2Q9BXF3 1484 aa28.91■■■□□ 2.22
PPP1CB-207ENST00000441461 SMARCA4P51532 1647 aa28.65■■■□□ 2.18
PPP1CB-207ENST00000441461 BAZ1AQ9NRL2 1556 aaPredicted RBP28.58■■■□□ 2.17
PPP1CB-207ENST00000441461 NCAPD3P42695 1498 aa28.52■■■□□ 2.16
PPP1CB-207ENST00000441461 ATAD2BQ9ULI0 1458 aa28.49■■■□□ 2.15
PPP1CB-207ENST00000441461 SMARCA2P51531 1590 aa28.46■■■□□ 2.15
PPP1CB-207ENST00000441461 PEG3Q9GZU2 1588 aa28.44■■■□□ 2.14
PPP1CB-207ENST00000441461 HMGXB3Q12766 1538 aa28.39■■■□□ 2.14
PPP1CB-207ENST00000441461 MROH2BQ7Z745 1585 aa28.39■■■□□ 2.14
PPP1CB-207ENST00000441461 BAZ1BQ9UIG0 1483 aaKnown RBP28.21■■■□□ 2.11
PPP1CB-207ENST00000441461 WIZO95785 1651 aa28.08■■■□□ 2.09
PPP1CB-207ENST00000441461 RSF1Q96T23 1441 aaPredicted RBP28.02■■■□□ 2.08
PPP1CB-207ENST00000441461 NESP48681 1621 aa27.81■■■□□ 2.04
PPP1CB-207ENST00000441461 TOP2AP11388 1531 aaKnown RBP27.8■■■□□ 2.04
PPP1CB-207ENST00000441461 LAMC3Q9Y6N6 1575 aa27.78■■■□□ 2.04
PPP1CB-207ENST00000441461 ERCC6Q03468 1493 aa27.67■■■□□ 2.02
PPP1CB-207ENST00000441461 CADPSQ9ULU8 1353 aa27.62■■■□□ 2.01
PPP1CB-207ENST00000441461 KIF21AQ7Z4S6 1674 aa27.55■■■□□ 2
PPP1CB-207ENST00000441461 PDS5BQ9NTI5 1447 aa27.53■■■□□ 2
PPP1CB-207ENST00000441461 CUX2O14529 1486 aa27.52■■■□□ 2
PPP1CB-207ENST00000441461 THOC2Q8NI27 1593 aaKnown RBP27.5■■□□□ 1.99
PPP1CB-207ENST00000441461 CFTRP13569 1480 aa27.48■■□□□ 1.99
PPP1CB-207ENST00000441461 CCDC88BA6NC98 1476 aa27.43■■□□□ 1.98
PPP1CB-207ENST00000441461 PRDM2Q13029 1718 aa27.36■■□□□ 1.97
PPP1CB-207ENST00000441461 FANCD2Q9BXW9 1451 aa27.3■■□□□ 1.96
PPP1CB-207ENST00000441461 MRC2Q9UBG0 1479 aa27.28■■□□□ 1.96
PPP1CB-207ENST00000441461 CEP164Q9UPV0 1460 aa27.28■■□□□ 1.96
PPP1CB-207ENST00000441461 WDR62O43379 1518 aa27.25■■□□□ 1.95
PPP1CB-207ENST00000441461 URB2Q14146 1524 aaKnown RBP27.07■■□□□ 1.92
PPP1CB-207ENST00000441461 SUPT5HO00267 1087 aaKnown RBP27.03■■□□□ 1.92
PPP1CB-207ENST00000441461 TOPBP1Q92547 1522 aa26.88■■□□□ 1.89
PPP1CB-207ENST00000441461 ABCC8Q09428 1581 aa26.87■■□□□ 1.89
PPP1CB-207ENST00000441461 DNMBPQ6XZF7 1577 aa26.86■■□□□ 1.89
PPP1CB-207ENST00000441461 DNAJC5Q9H3Z4 198 aa26.75■■□□□ 1.87
PPP1CB-207ENST00000441461 IFT140Q96RY7 1462 aa26.73■■□□□ 1.87
PPP1CB-207ENST00000441461 TARBP1Q13395 1621 aaKnown RBP26.66■■□□□ 1.86
PPP1CB-207ENST00000441461 POLA1P09884 1462 aaPredicted RBP26.66■■□□□ 1.86
PPP1CB-207ENST00000441461 CUX1P39880 1505 aa26.65■■□□□ 1.86
PPP1CB-207ENST00000441461 ZNF608Q9ULD9 1512 aaPredicted RBP26.6■■□□□ 1.85
PPP1CB-207ENST00000441461 FGD5Q6ZNL6 1462 aa26.55■■□□□ 1.84
PPP1CB-207ENST00000441461 EIF4G3O43432 1585 aaKnown RBP26.54■■□□□ 1.84
PPP1CB-207ENST00000441461 RAD54L2Q9Y4B4 1467 aa26.49■■□□□ 1.83
PPP1CB-207ENST00000441461 SOGA1O94964 1423 aa26.48■■□□□ 1.83
PPP1CB-207ENST00000441461 WDR97A6NE52 1622 aa26.47■■□□□ 1.83
PPP1CB-207ENST00000441461 BIVM-ERCC5R4GMW8 1640 aa26.44■■□□□ 1.82
PPP1CB-207ENST00000441461 TOP2BQ02880 1626 aa26.42■■□□□ 1.82
PPP1CB-207ENST00000441461 AQRO60306 1485 aaKnown RBP eCLIP26.42■■□□□ 1.823e-8■■■■□ 22.3
PPP1CB-207ENST00000441461 SYNJ1O43426 1573 aa26.39■■□□□ 1.82
PPP1CB-207ENST00000441461 WRNQ14191 1432 aaPredicted RBP eCLIP26.39■■□□□ 1.81
PPP1CB-207ENST00000441461 ABCA10Q8WWZ4 1543 aa26.32■■□□□ 1.8
PPP1CB-207ENST00000441461 TDRD9Q8NDG6 1382 aaKnown RBP26.32■■□□□ 1.8
PPP1CB-207ENST00000441461 ABCA5Q8WWZ7 1642 aa26.27■■□□□ 1.8
PPP1CB-207ENST00000441461 OSCARQ8IYS5 282 aa26.26■■□□□ 1.79
PPP1CB-207ENST00000441461 CHD1O14646 1710 aa26.24■■□□□ 1.79
PPP1CB-207ENST00000441461 GRIN2BQ13224 1484 aa26.22■■□□□ 1.79
PPP1CB-207ENST00000441461 PBRM1Q86U86 1689 aa26.22■■□□□ 1.79
PPP1CB-207ENST00000441461 GAPVD1Q14C86 1478 aa26.19■■□□□ 1.78
PPP1CB-207ENST00000441461 MAGI1Q96QZ7 1491 aaPredicted RBP26.19■■□□□ 1.78
PPP1CB-207ENST00000441461 SNAPC4Q5SXM2 1469 aa26.18■■□□□ 1.78
PPP1CB-207ENST00000441461 SYNJ2O15056 1496 aa26.08■■□□□ 1.77
PPP1CB-207ENST00000441461 ERICH3Q5RHP9 1530 aa26.01■■□□□ 1.75
PPP1CB-207ENST00000441461 ADAMTS12P58397 1594 aa25.99■■□□□ 1.75
PPP1CB-207ENST00000441461 FBLN2P98095 1184 aa25.98■■□□□ 1.75
PPP1CB-207ENST00000441461 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
PPP1CB-207ENST00000441461 CHMP7Q8WUX9 453 aaPredicted RBP25.96■■□□□ 1.75
PPP1CB-207ENST00000441461 RIMBP3CA6NJZ7 1639 aa25.96■■□□□ 1.75
PPP1CB-207ENST00000441461 RIMBP3BA6NNM3 1639 aa25.96■■□□□ 1.75
PPP1CB-207ENST00000441461 RIMBP3Q9UFD9 1639 aa25.96■■□□□ 1.75
PPP1CB-207ENST00000441461 ARHGEF11O15085 1522 aa25.92■■□□□ 1.74
PPP1CB-207ENST00000441461 GRIN2AQ12879 1464 aa25.9■■□□□ 1.74
PPP1CB-207ENST00000441461 FHAD1B1AJZ9 1412 aa25.89■■□□□ 1.74
PPP1CB-207ENST00000441461 KIF27Q86VH2 1401 aa25.84■■□□□ 1.73
PPP1CB-207ENST00000441461 NUP160Q12769 1436 aa25.82■■□□□ 1.72
PPP1CB-207ENST00000441461 CEP170Q5SW79 1584 aa25.8■■□□□ 1.72
PPP1CB-207ENST00000441461 IGF1RP08069 1367 aa25.77■■□□□ 1.72
PPP1CB-207ENST00000441461 CUL7Q14999 1698 aa25.77■■□□□ 1.72
PPP1CB-207ENST00000441461 ARAP1Q96P48 1450 aa25.71■■□□□ 1.71
PPP1CB-207ENST00000441461 SHROOM2Q13796 1616 aa25.69■■□□□ 1.7
PPP1CB-207ENST00000441461 TRIM41Q8WV44 630 aa25.68■■□□□ 1.7
PPP1CB-207ENST00000441461 RUSC2Q8N2Y8 1516 aa25.63■■□□□ 1.69
PPP1CB-207ENST00000441461 CARMIL1Q5VZK9 1371 aa25.57■■□□□ 1.68
PPP1CB-207ENST00000441461 ERCC6L2Q5T890 1561 aa25.56■■□□□ 1.68
PPP1CB-207ENST00000441461 CYB5RLQ6IPT4 315 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms