RNA–Protein interactions for RNA: ENST00000460639.2

ATRX-204, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-204ENST00000460639 AEBP2Q6ZN18 517 aaPredicted RBP19.68■□□□□ 0.74
ATRX-204ENST00000460639 CHIC1Q5VXU3 224 aa19.3■□□□□ 0.68
ATRX-204ENST00000460639 PHF23Q9BUL5 403 aaPredicted RBP17.05■□□□□ 0.32
ATRX-204ENST00000460639 SENP3Q9H4L4 574 aaPredicted RBP16.58■□□□□ 0.24
ATRX-204ENST00000460639 PLPPR3Q6T4P5 718 aa15.71■□□□□ 0.11
ATRX-204ENST00000460639 FOXD1Q16676 465 aa15.44■□□□□ 0.06
ATRX-204ENST00000460639 ADRA2BP18089 450 aa15.03■□□□□ -0
ATRX-204ENST00000460639 PPP6R1Q9UPN7 881 aa15.01□□□□□ -0.01
ATRX-204ENST00000460639 POTEDQ86YR6 584 aa14.62□□□□□ -0.07
ATRX-204ENST00000460639 PIAS4Q8N2W9 510 aaPredicted RBP14.61□□□□□ -0.07
ATRX-204ENST00000460639 MSH5O43196 834 aa14.15□□□□□ -0.14
ATRX-204ENST00000460639 PPP4R3CPQ6ZMV5 832 aa13.92□□□□□ -0.18
ATRX-204ENST00000460639 KCNA4P22459 653 aa13.82□□□□□ -0.2
ATRX-204ENST00000460639 MAPK8IP2Q13387 824 aaPredicted RBP13.61□□□□□ -0.23
ATRX-204ENST00000460639 SCAF1Q9H7N4 1312 aaKnown RBP13.6□□□□□ -0.23
ATRX-204ENST00000460639 NCBP3Q53F19 620 aaKnown RBP13.54□□□□□ -0.24
ATRX-204ENST00000460639 CNKSR2Q8WXI2 1034 aa13.44□□□□□ -0.26
ATRX-204ENST00000460639 NPM3O75607 178 aaKnown RBP13.4□□□□□ -0.26
ATRX-204ENST00000460639 DMRT2Q9Y5R5 561 aa13.27□□□□□ -0.29
ATRX-204ENST00000460639 SLC4A1APQ9BWU0 796 aaKnown RBP13.16□□□□□ -0.3
ATRX-204ENST00000460639 RNF216Q9NWF9 866 aaPredicted RBP13.13□□□□□ -0.31
ATRX-204ENST00000460639 EHMT2Q96KQ7 1210 aa13.05□□□□□ -0.32
ATRX-204ENST00000460639 HOXD11P31277 338 aaPredicted RBP13.03□□□□□ -0.32
ATRX-204ENST00000460639 DCAF8L1A6NGE4 600 aa12.81□□□□□ -0.36
ATRX-204ENST00000460639 DNAJC5BQ9UF47 199 aa12.8□□□□□ -0.36
ATRX-204ENST00000460639 CSRNP3Q8WYN3 585 aa12.75□□□□□ -0.37
ATRX-204ENST00000460639 ZBTB22O15209 634 aa12.74□□□□□ -0.37
ATRX-204ENST00000460639 SLC4A2P04920 1241 aa12.63□□□□□ -0.39
ATRX-204ENST00000460639 FOXD4L1Q9NU39 408 aa12.61□□□□□ -0.39
ATRX-204ENST00000460639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.49□□□□□ -0.412e-7■■■□□ 14.9
ATRX-204ENST00000460639 MYCNP04198 464 aaPredicted RBP12.34□□□□□ -0.43
ATRX-204ENST00000460639 U3KPZ7 1027 aaPredicted RBP12.31□□□□□ -0.44
ATRX-204ENST00000460639 RNF39Q9H2S5 420 aa12.12□□□□□ -0.47
ATRX-204ENST00000460639 ATF5Q9Y2D1 282 aaPredicted RBP12.1□□□□□ -0.47
ATRX-204ENST00000460639 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.09□□□□□ -0.47
ATRX-204ENST00000460639 HNRNPUL2Q1KMD3 747 aaKnown RBP12.09□□□□□ -0.47
ATRX-204ENST00000460639 SAMD1Q6SPF0 538 aaPredicted RBP12.09□□□□□ -0.47
ATRX-204ENST00000460639 ATXN8OSP0DMR3 200 aa12.07□□□□□ -0.48
ATRX-204ENST00000460639 CACNB1Q02641 598 aaPredicted RBP12.03□□□□□ -0.48
ATRX-204ENST00000460639 SPINK5Q9NQ38 1064 aaPredicted RBP11.97□□□□□ -0.49
ATRX-204ENST00000460639 C1QBPQ07021 282 aaKnown RBP11.96□□□□□ -0.49
ATRX-204ENST00000460639 APLP2Q06481 763 aa11.92□□□□□ -0.5
ATRX-204ENST00000460639 TRHP20396 242 aaPredicted RBP11.9□□□□□ -0.5
ATRX-204ENST00000460639 CAPN15O75808 1086 aa11.89□□□□□ -0.51
ATRX-204ENST00000460639 ZNF219Q9P2Y4 722 aaPredicted RBP11.83□□□□□ -0.52
ATRX-204ENST00000460639 ABCB7O75027 752 aa11.74□□□□□ -0.53
ATRX-204ENST00000460639 POLA2Q14181 598 aa11.7□□□□□ -0.54
ATRX-204ENST00000460639 DSG3P32926 999 aa11.61□□□□□ -0.55
ATRX-204ENST00000460639 MKRN4PQ13434 485 aaPredicted RBP11.55□□□□□ -0.56
ATRX-204ENST00000460639 FKBP8Q14318 412 aa11.55□□□□□ -0.56
ATRX-204ENST00000460639 FBLN2P98095 1184 aa11.49□□□□□ -0.57
ATRX-204ENST00000460639 ZBTB12Q9Y330 459 aaPredicted RBP11.4□□□□□ -0.58
ATRX-204ENST00000460639 SPDYE4A6NLX3 237 aa11.34□□□□□ -0.59
ATRX-204ENST00000460639 OSCARQ8IYS5 282 aa11.32□□□□□ -0.6
ATRX-204ENST00000460639 POTEHQ6S545 545 aa11.26□□□□□ -0.61
ATRX-204ENST00000460639 ZNF692Q9BU19 519 aaPredicted RBP11.18□□□□□ -0.62
ATRX-204ENST00000460639 SPDYE2BA6NHP3 402 aa11.15□□□□□ -0.62
ATRX-204ENST00000460639 SPDYE6P0CI01 402 aa11.15□□□□□ -0.62
ATRX-204ENST00000460639 SPDYE2Q495Y8 402 aa11.15□□□□□ -0.62
ATRX-204ENST00000460639 PROM2Q8N271 834 aa11.1□□□□□ -0.63
ATRX-204ENST00000460639 SSUH2Q9Y2M2 353 aa11.09□□□□□ -0.63
ATRX-204ENST00000460639 PABPN1Q86U42 306 aaKnown RBP eCLIP11.06□□□□□ -0.64
ATRX-204ENST00000460639 RBM42Q9BTD8 480 aaKnown RBP11.01□□□□□ -0.65
ATRX-204ENST00000460639 FBXO3Q9UK99 471 aa10.98□□□□□ -0.65
ATRX-204ENST00000460639 AKT1S1Q96B36 256 aa10.91□□□□□ -0.66
ATRX-204ENST00000460639 VASPP50552 380 aaPredicted RBP10.9□□□□□ -0.66
ATRX-204ENST00000460639 REM2Q8IYK8 340 aaPredicted RBP10.86□□□□□ -0.67
ATRX-204ENST00000460639 CLEC11AQ9Y240 323 aa10.84□□□□□ -0.67
ATRX-204ENST00000460639 SLC24A1O60721 1099 aa10.82□□□□□ -0.68
ATRX-204ENST00000460639 STAG3Q9UJ98 1225 aa10.81□□□□□ -0.68
ATRX-204ENST00000460639 SPDYE1Q8NFV5 336 aaPredicted RBP10.79□□□□□ -0.68
ATRX-204ENST00000460639 RTN4Q9NQC3 1192 aaKnown RBP10.79□□□□□ -0.68
ATRX-204ENST00000460639 IFNLR1Q8IU57 520 aaPredicted RBP10.78□□□□□ -0.68
ATRX-204ENST00000460639 PITPNM1O00562 1244 aa10.76□□□□□ -0.69
ATRX-204ENST00000460639 PLCD3Q8N3E9 789 aa10.76□□□□□ -0.69
ATRX-204ENST00000460639 MIER1Q8N108 512 aa10.75□□□□□ -0.69
ATRX-204ENST00000460639 AMER1Q5JTC6 1135 aaPredicted RBP10.71□□□□□ -0.69
ATRX-204ENST00000460639 KLHL34Q8N239 644 aa10.71□□□□□ -0.69
ATRX-204ENST00000460639 PRR29P0C7W0 189 aa10.7□□□□□ -0.7
ATRX-204ENST00000460639 PLEKHG5O94827 1062 aa10.61□□□□□ -0.71
ATRX-204ENST00000460639 CREBZFQ9NS37 354 aa10.61□□□□□ -0.71
ATRX-204ENST00000460639 SPOCK2Q92563 424 aa10.59□□□□□ -0.71
ATRX-204ENST00000460639 CHADLQ6NUI6 762 aa10.58□□□□□ -0.72
ATRX-204ENST00000460639 CHRDL2Q6WN34 429 aa10.54□□□□□ -0.72
ATRX-204ENST00000460639 ZBTB47Q9UFB7 747 aaPredicted RBP10.52□□□□□ -0.73
ATRX-204ENST00000460639 MNX1P50219 401 aaPredicted RBP10.5□□□□□ -0.73
ATRX-204ENST00000460639 PRKAR2AP13861 404 aaKnown RBP10.49□□□□□ -0.73
ATRX-204ENST00000460639 PKD2Q13563 968 aa10.47□□□□□ -0.73
ATRX-204ENST00000460639 FXR2P51116 673 aaKnown RBP eCLIP10.46□□□□□ -0.731e-9■■■□□ 17
ATRX-204ENST00000460639 PIP4P2Q8N4L2 257 aa10.46□□□□□ -0.73
ATRX-204ENST00000460639 CIZ1Q9ULV3 898 aaPredicted RBP10.46□□□□□ -0.73
ATRX-204ENST00000460639 NUBP1P53384 320 aa10.44□□□□□ -0.74
ATRX-204ENST00000460639 FARP1Q9Y4F1 1045 aaPredicted RBP10.41□□□□□ -0.74
ATRX-204ENST00000460639 ECM2O94769 699 aaPredicted RBP10.4□□□□□ -0.74
ATRX-204ENST00000460639 RASEFQ8IZ41 740 aa10.4□□□□□ -0.74
ATRX-204ENST00000460639 DCAF8Q5TAQ9 597 aa10.39□□□□□ -0.75
ATRX-204ENST00000460639 NPM1P06748 294 aaKnown RBP eCLIP10.38□□□□□ -0.75
ATRX-204ENST00000460639 DCAF8L2P0C7V8 631 aa10.38□□□□□ -0.75
ATRX-204ENST00000460639 FAM212AQ96EL1 285 aa10.34□□□□□ -0.75
ATRX-204ENST00000460639 TSPYL2Q9H2G4 693 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 195 ms