RNA–Protein interactions for RNA: ENST00000480283.5

ATRX-206, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 10,455 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-206ENST00000480283 DCAF8L2P0C7V8 631 aa6.79□□□□□ -1.32
ATRX-206ENST00000480283 NISCHQ9Y2I1 1504 aa6.78□□□□□ -1.32
ATRX-206ENST00000480283 SHROOM4Q9ULL8 1493 aa6.5□□□□□ -1.37
ATRX-206ENST00000480283 SUPT5HO00267 1087 aaKnown RBP6.47□□□□□ -1.37
ATRX-206ENST00000480283 CCDC180Q9P1Z9 1646 aa6.35□□□□□ -1.39
ATRX-206ENST00000480283 EHMT2Q96KQ7 1210 aa6.31□□□□□ -1.4
ATRX-206ENST00000480283 MYO15BQ96JP2 1530 aa6.24□□□□□ -1.41
ATRX-206ENST00000480283 DCAF1Q9Y4B6 1507 aa6.13□□□□□ -1.43
ATRX-206ENST00000480283 FAM9AQ8IZU1 332 aaPredicted RBP6.11□□□□□ -1.43
ATRX-206ENST00000480283 TTBK1Q5TCY1 1321 aaPredicted RBP6.02□□□□□ -1.45
ATRX-206ENST00000480283 BAZ1BQ9UIG0 1483 aaKnown RBP6.01□□□□□ -1.45
ATRX-206ENST00000480283 PPARGC1BQ86YN6 1023 aaKnown RBP5.95□□□□□ -1.46
ATRX-206ENST00000480283 RANGAP1P46060 587 aaPredicted RBP5.95□□□□□ -1.46
ATRX-206ENST00000480283 LOC105371045A0A1W2PR82 267 aa5.92□□□□□ -1.46
ATRX-206ENST00000480283 PCGF6Q9BYE7 350 aa5.91□□□□□ -1.46
ATRX-206ENST00000480283 PABPN1Q86U42 306 aaKnown RBP eCLIP5.9□□□□□ -1.46
ATRX-206ENST00000480283 TRIM41Q8WV44 630 aa5.9□□□□□ -1.46
ATRX-206ENST00000480283 ABCC9O60706 1549 aa5.89□□□□□ -1.47
ATRX-206ENST00000480283 CHIC1Q5VXU3 224 aa5.86□□□□□ -1.47
ATRX-206ENST00000480283 ACIN1Q9UKV3 1341 aaKnown RBP5.77□□□□□ -1.49
ATRX-206ENST00000480283 ATP1B4Q9UN42 357 aaPredicted RBP5.76□□□□□ -1.49
ATRX-206ENST00000480283 UBTFP17480 764 aaKnown RBP5.76□□□□□ -1.49
ATRX-206ENST00000480283 SCAF1Q9H7N4 1312 aaKnown RBP5.73□□□□□ -1.49
ATRX-206ENST00000480283 APLP2Q06481 763 aa5.7□□□□□ -1.5
ATRX-206ENST00000480283 CCER1Q8TC90 406 aaPredicted RBP5.65□□□□□ -1.5
ATRX-206ENST00000480283 ITGAEP38570 1179 aa5.64□□□□□ -1.51
ATRX-206ENST00000480283 ZCCHC6Q5VYS8 1495 aaKnown RBP5.64□□□□□ -1.51
ATRX-206ENST00000480283 MYT1Q01538 1121 aa5.63□□□□□ -1.51
ATRX-206ENST00000480283 HNRNPUL2Q1KMD3 747 aaKnown RBP5.62□□□□□ -1.51
ATRX-206ENST00000480283 TRIM26Q12899 539 aaPredicted RBP5.61□□□□□ -1.51
ATRX-206ENST00000480283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.59□□□□□ -1.51
ATRX-206ENST00000480283 HRCP23327 699 aa5.59□□□□□ -1.51
ATRX-206ENST00000480283 NACADO15069 1562 aa5.59□□□□□ -1.51
ATRX-206ENST00000480283 YTHDC1Q96MU7 727 aaKnown RBP5.57□□□□□ -1.52
ATRX-206ENST00000480283 P3H3Q8IVL6 736 aa5.56□□□□□ -1.52
ATRX-206ENST00000480283 SCRIBQ14160 1630 aa5.56□□□□□ -1.52
ATRX-206ENST00000480283 ARID3CA6NKF2 412 aa5.52□□□□□ -1.53
ATRX-206ENST00000480283 CSRNP3Q8WYN3 585 aa5.51□□□□□ -1.53
ATRX-206ENST00000480283 CNGB1Q14028 1251 aaPredicted RBP5.51□□□□□ -1.53
ATRX-206ENST00000480283 RSF1Q96T23 1441 aaPredicted RBP5.51□□□□□ -1.53
ATRX-206ENST00000480283 CECR2Q9BXF3 1484 aa5.49□□□□□ -1.53
ATRX-206ENST00000480283 FBLN2P98095 1184 aa5.47□□□□□ -1.53
ATRX-206ENST00000480283 ZEB1P37275 1124 aaPredicted RBP5.46□□□□□ -1.54
ATRX-206ENST00000480283 FAM50AQ14320 339 aaKnown RBP5.46□□□□□ -1.54
ATRX-206ENST00000480283 CLSPNQ9HAW4 1339 aa5.46□□□□□ -1.54
ATRX-206ENST00000480283 PRDM2Q13029 1718 aa5.44□□□□□ -1.54
ATRX-206ENST00000480283 EEA1Q15075 1411 aa5.43□□□□□ -1.54
ATRX-206ENST00000480283 NEUROD1Q13562 356 aa5.42□□□□□ -1.54
ATRX-206ENST00000480283 WDR97A6NE52 1622 aa5.42□□□□□ -1.54
ATRX-206ENST00000480283 POLR3GLQ9BT43 218 aa5.41□□□□□ -1.54
ATRX-206ENST00000480283 MYT1LQ9UL68 1186 aa5.41□□□□□ -1.54
ATRX-206ENST00000480283 SMARCA2P51531 1590 aa5.39□□□□□ -1.55
ATRX-206ENST00000480283 PEG3Q9GZU2 1588 aa5.39□□□□□ -1.55
ATRX-206ENST00000480283 TRIM52Q96A61 297 aa5.38□□□□□ -1.55
ATRX-206ENST00000480283 PELP1Q8IZL8 1130 aaKnown RBP5.36□□□□□ -1.55
ATRX-206ENST00000480283 MROH2BQ7Z745 1585 aa5.36□□□□□ -1.55
ATRX-206ENST00000480283 DIEXFQ68CQ4 756 aaKnown RBP5.34□□□□□ -1.55
ATRX-206ENST00000480283 SOGA1O94964 1423 aa5.34□□□□□ -1.55
ATRX-206ENST00000480283 ZNF777Q9ULD5 760 aaPredicted RBP5.34□□□□□ -1.55
ATRX-206ENST00000480283 HIRIP3Q9BW71 556 aaPredicted RBP5.33□□□□□ -1.56
ATRX-206ENST00000480283 CHIC2Q9UKJ5 165 aa5.33□□□□□ -1.56
ATRX-206ENST00000480283 CENPBP07199 599 aaPredicted RBP5.32□□□□□ -1.56
ATRX-206ENST00000480283 RB1CC1Q8TDY2 1594 aa5.31□□□□□ -1.56
ATRX-206ENST00000480283 ZNF326Q5BKZ1 582 aaKnown RBP5.29□□□□□ -1.56
ATRX-206ENST00000480283 BCANQ96GW7 911 aa5.29□□□□□ -1.56
ATRX-206ENST00000480283 WRNQ14191 1432 aaPredicted RBP eCLIP5.29□□□□□ -1.56
ATRX-206ENST00000480283 CCDC88BA6NC98 1476 aa5.29□□□□□ -1.56
ATRX-206ENST00000480283 KIF21AQ7Z4S6 1674 aa5.28□□□□□ -1.56
ATRX-206ENST00000480283 SENP3-EIF4A1A0A087X0R7 540 aa5.28□□□□□ -1.56
ATRX-206ENST00000480283 ZNF316A6NFI3 1004 aaPredicted RBP5.28□□□□□ -1.56
ATRX-206ENST00000480283 RUSC2Q8N2Y8 1516 aa5.27□□□□□ -1.57
ATRX-206ENST00000480283 GTF3C3Q9Y5Q9 886 aa5.27□□□□□ -1.57
ATRX-206ENST00000480283 BAZ1AQ9NRL2 1556 aaPredicted RBP5.26□□□□□ -1.57
ATRX-206ENST00000480283 CEP162Q5TB80 1403 aa5.26□□□□□ -1.57
ATRX-206ENST00000480283 KANK4Q5T7N3 995 aaPredicted RBP5.26□□□□□ -1.57
ATRX-206ENST00000480283 DNAJC5BQ9UF47 199 aa5.26□□□□□ -1.57
ATRX-206ENST00000480283 SENP3Q9H4L4 574 aaPredicted RBP5.25□□□□□ -1.57
ATRX-206ENST00000480283 ARID4BQ4LE39 1312 aaPredicted RBP5.25□□□□□ -1.57
ATRX-206ENST00000480283 ABCC8Q09428 1581 aa5.24□□□□□ -1.57
ATRX-206ENST00000480283 RRP7BPQ9NSQ0 103 aa5.24□□□□□ -1.57
ATRX-206ENST00000480283 CHMP7Q8WUX9 453 aaPredicted RBP5.24□□□□□ -1.57
ATRX-206ENST00000480283 SIN3AQ96ST3 1273 aa5.24□□□□□ -1.57
ATRX-206ENST00000480283 CLIP1P30622 1438 aa5.23□□□□□ -1.57
ATRX-206ENST00000480283 SLC4A1APQ9BWU0 796 aaKnown RBP5.23□□□□□ -1.57
ATRX-206ENST00000480283 DDX10Q13206 875 aaKnown RBP5.22□□□□□ -1.57
ATRX-206ENST00000480283 KCNH8Q96L42 1107 aa5.22□□□□□ -1.57
ATRX-206ENST00000480283 MIER1Q8N108 512 aa5.22□□□□□ -1.57
ATRX-206ENST00000480283 TNIKQ9UKE5 1360 aa5.22□□□□□ -1.57
ATRX-206ENST00000480283 TDRD9Q8NDG6 1382 aaKnown RBP5.22□□□□□ -1.57
ATRX-206ENST00000480283 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.21□□□□□ -1.571e-6■■■□□ 14.9
ATRX-206ENST00000480283 PLPPR3Q6T4P5 718 aa5.21□□□□□ -1.58
ATRX-206ENST00000480283 SLC24A1O60721 1099 aa5.2□□□□□ -1.58
ATRX-206ENST00000480283 GOLGA3Q08378 1498 aa5.2□□□□□ -1.58
ATRX-206ENST00000480283 ATAD2BQ9ULI0 1458 aa5.19□□□□□ -1.58
ATRX-206ENST00000480283 KDM2AQ9Y2K7 1162 aa5.19□□□□□ -1.58
ATRX-206ENST00000480283 CHGAP10645 457 aaKnown RBP5.18□□□□□ -1.58
ATRX-206ENST00000480283 WIZO95785 1651 aa5.18□□□□□ -1.58
ATRX-206ENST00000480283 SALL2Q9Y467 1007 aaPredicted RBP5.18□□□□□ -1.58
ATRX-206ENST00000480283 CUX2O14529 1486 aa5.18□□□□□ -1.58
ATRX-206ENST00000480283 CARMIL1Q5VZK9 1371 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms