RNA–Protein interactions for RNA: ENST00000480283.5

ATRX-206, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 10,455 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-206ENST00000480283 DCAF8L2P0C7V8 631 aa6.79□□□□□ -1.32
ATRX-206ENST00000480283 NISCHQ9Y2I1 1504 aa6.78□□□□□ -1.32
ATRX-206ENST00000480283 SHROOM4Q9ULL8 1493 aa6.5□□□□□ -1.37
ATRX-206ENST00000480283 SUPT5HO00267 1087 aaKnown RBP6.47□□□□□ -1.37
ATRX-206ENST00000480283 CCDC180Q9P1Z9 1646 aa6.35□□□□□ -1.39
ATRX-206ENST00000480283 EHMT2Q96KQ7 1210 aa6.31□□□□□ -1.4
ATRX-206ENST00000480283 MYO15BQ96JP2 1530 aa6.24□□□□□ -1.41
ATRX-206ENST00000480283 DCAF1Q9Y4B6 1507 aa6.13□□□□□ -1.43
ATRX-206ENST00000480283 FAM9AQ8IZU1 332 aaPredicted RBP6.11□□□□□ -1.43
ATRX-206ENST00000480283 TTBK1Q5TCY1 1321 aaPredicted RBP6.02□□□□□ -1.45
ATRX-206ENST00000480283 BAZ1BQ9UIG0 1483 aaKnown RBP6.01□□□□□ -1.45
ATRX-206ENST00000480283 PPARGC1BQ86YN6 1023 aaKnown RBP5.95□□□□□ -1.46
ATRX-206ENST00000480283 RANGAP1P46060 587 aaPredicted RBP5.95□□□□□ -1.46
ATRX-206ENST00000480283 LOC105371045A0A1W2PR82 267 aa5.92□□□□□ -1.46
ATRX-206ENST00000480283 PCGF6Q9BYE7 350 aa5.91□□□□□ -1.46
ATRX-206ENST00000480283 PABPN1Q86U42 306 aaKnown RBP eCLIP5.9□□□□□ -1.46
ATRX-206ENST00000480283 TRIM41Q8WV44 630 aa5.9□□□□□ -1.46
ATRX-206ENST00000480283 ABCC9O60706 1549 aa5.89□□□□□ -1.47
ATRX-206ENST00000480283 CHIC1Q5VXU3 224 aa5.86□□□□□ -1.47
ATRX-206ENST00000480283 ACIN1Q9UKV3 1341 aaKnown RBP5.77□□□□□ -1.49
ATRX-206ENST00000480283 ATP1B4Q9UN42 357 aaPredicted RBP5.76□□□□□ -1.49
ATRX-206ENST00000480283 UBTFP17480 764 aaKnown RBP5.76□□□□□ -1.49
ATRX-206ENST00000480283 SCAF1Q9H7N4 1312 aaKnown RBP5.73□□□□□ -1.49
ATRX-206ENST00000480283 APLP2Q06481 763 aa5.7□□□□□ -1.5
ATRX-206ENST00000480283 CCER1Q8TC90 406 aaPredicted RBP5.65□□□□□ -1.5
ATRX-206ENST00000480283 ITGAEP38570 1179 aa5.64□□□□□ -1.51
ATRX-206ENST00000480283 ZCCHC6Q5VYS8 1495 aaKnown RBP5.64□□□□□ -1.51
ATRX-206ENST00000480283 MYT1Q01538 1121 aa5.63□□□□□ -1.51
ATRX-206ENST00000480283 HNRNPUL2Q1KMD3 747 aaKnown RBP5.62□□□□□ -1.51
ATRX-206ENST00000480283 TRIM26Q12899 539 aaPredicted RBP5.61□□□□□ -1.51
ATRX-206ENST00000480283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.59□□□□□ -1.51
ATRX-206ENST00000480283 HRCP23327 699 aa5.59□□□□□ -1.51
ATRX-206ENST00000480283 NACADO15069 1562 aa5.59□□□□□ -1.51
ATRX-206ENST00000480283 YTHDC1Q96MU7 727 aaKnown RBP5.57□□□□□ -1.52
ATRX-206ENST00000480283 P3H3Q8IVL6 736 aa5.56□□□□□ -1.52
ATRX-206ENST00000480283 SCRIBQ14160 1630 aa5.56□□□□□ -1.52
ATRX-206ENST00000480283 ARID3CA6NKF2 412 aa5.52□□□□□ -1.53
ATRX-206ENST00000480283 CSRNP3Q8WYN3 585 aa5.51□□□□□ -1.53
ATRX-206ENST00000480283 CNGB1Q14028 1251 aaPredicted RBP5.51□□□□□ -1.53
ATRX-206ENST00000480283 RSF1Q96T23 1441 aaPredicted RBP5.51□□□□□ -1.53
ATRX-206ENST00000480283 CECR2Q9BXF3 1484 aa5.49□□□□□ -1.53
ATRX-206ENST00000480283 FBLN2P98095 1184 aa5.47□□□□□ -1.53
ATRX-206ENST00000480283 ZEB1P37275 1124 aaPredicted RBP5.46□□□□□ -1.54
ATRX-206ENST00000480283 FAM50AQ14320 339 aaKnown RBP5.46□□□□□ -1.54
ATRX-206ENST00000480283 CLSPNQ9HAW4 1339 aa5.46□□□□□ -1.54
ATRX-206ENST00000480283 PRDM2Q13029 1718 aa5.44□□□□□ -1.54
ATRX-206ENST00000480283 EEA1Q15075 1411 aa5.43□□□□□ -1.54
ATRX-206ENST00000480283 NEUROD1Q13562 356 aa5.42□□□□□ -1.54
ATRX-206ENST00000480283 WDR97A6NE52 1622 aa5.42□□□□□ -1.54
ATRX-206ENST00000480283 POLR3GLQ9BT43 218 aa5.41□□□□□ -1.54
ATRX-206ENST00000480283 MYT1LQ9UL68 1186 aa5.41□□□□□ -1.54
ATRX-206ENST00000480283 SMARCA2P51531 1590 aa5.39□□□□□ -1.55
ATRX-206ENST00000480283 PEG3Q9GZU2 1588 aa5.39□□□□□ -1.55
ATRX-206ENST00000480283 TRIM52Q96A61 297 aa5.38□□□□□ -1.55
ATRX-206ENST00000480283 PELP1Q8IZL8 1130 aaKnown RBP5.36□□□□□ -1.55
ATRX-206ENST00000480283 MROH2BQ7Z745 1585 aa5.36□□□□□ -1.55
ATRX-206ENST00000480283 DIEXFQ68CQ4 756 aaKnown RBP5.34□□□□□ -1.55
ATRX-206ENST00000480283 SOGA1O94964 1423 aa5.34□□□□□ -1.55
ATRX-206ENST00000480283 ZNF777Q9ULD5 760 aaPredicted RBP5.34□□□□□ -1.55
ATRX-206ENST00000480283 HIRIP3Q9BW71 556 aaPredicted RBP5.33□□□□□ -1.56
ATRX-206ENST00000480283 CHIC2Q9UKJ5 165 aa5.33□□□□□ -1.56
ATRX-206ENST00000480283 CENPBP07199 599 aaPredicted RBP5.32□□□□□ -1.56
ATRX-206ENST00000480283 RB1CC1Q8TDY2 1594 aa5.31□□□□□ -1.56
ATRX-206ENST00000480283 ZNF326Q5BKZ1 582 aaKnown RBP5.29□□□□□ -1.56
ATRX-206ENST00000480283 BCANQ96GW7 911 aa5.29□□□□□ -1.56
ATRX-206ENST00000480283 WRNQ14191 1432 aaPredicted RBP eCLIP5.29□□□□□ -1.56
ATRX-206ENST00000480283 CCDC88BA6NC98 1476 aa5.29□□□□□ -1.56
ATRX-206ENST00000480283 KIF21AQ7Z4S6 1674 aa5.28□□□□□ -1.56
ATRX-206ENST00000480283 SENP3-EIF4A1A0A087X0R7 540 aa5.28□□□□□ -1.56
ATRX-206ENST00000480283 ZNF316A6NFI3 1004 aaPredicted RBP5.28□□□□□ -1.56
ATRX-206ENST00000480283 RUSC2Q8N2Y8 1516 aa5.27□□□□□ -1.57
ATRX-206ENST00000480283 GTF3C3Q9Y5Q9 886 aa5.27□□□□□ -1.57
ATRX-206ENST00000480283 BAZ1AQ9NRL2 1556 aaPredicted RBP5.26□□□□□ -1.57
ATRX-206ENST00000480283 CEP162Q5TB80 1403 aa5.26□□□□□ -1.57
ATRX-206ENST00000480283 KANK4Q5T7N3 995 aaPredicted RBP5.26□□□□□ -1.57
ATRX-206ENST00000480283 DNAJC5BQ9UF47 199 aa5.26□□□□□ -1.57
ATRX-206ENST00000480283 SENP3Q9H4L4 574 aaPredicted RBP5.25□□□□□ -1.57
ATRX-206ENST00000480283 ARID4BQ4LE39 1312 aaPredicted RBP5.25□□□□□ -1.57
ATRX-206ENST00000480283 ABCC8Q09428 1581 aa5.24□□□□□ -1.57
ATRX-206ENST00000480283 RRP7BPQ9NSQ0 103 aa5.24□□□□□ -1.57
ATRX-206ENST00000480283 CHMP7Q8WUX9 453 aaPredicted RBP5.24□□□□□ -1.57
ATRX-206ENST00000480283 SIN3AQ96ST3 1273 aa5.24□□□□□ -1.57
ATRX-206ENST00000480283 CLIP1P30622 1438 aa5.23□□□□□ -1.57
ATRX-206ENST00000480283 SLC4A1APQ9BWU0 796 aaKnown RBP5.23□□□□□ -1.57
ATRX-206ENST00000480283 DDX10Q13206 875 aaKnown RBP5.22□□□□□ -1.57
ATRX-206ENST00000480283 KCNH8Q96L42 1107 aa5.22□□□□□ -1.57
ATRX-206ENST00000480283 MIER1Q8N108 512 aa5.22□□□□□ -1.57
ATRX-206ENST00000480283 TNIKQ9UKE5 1360 aa5.22□□□□□ -1.57
ATRX-206ENST00000480283 TDRD9Q8NDG6 1382 aaKnown RBP5.22□□□□□ -1.57
ATRX-206ENST00000480283 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.21□□□□□ -1.571e-6■■■□□ 14.9
ATRX-206ENST00000480283 PLPPR3Q6T4P5 718 aa5.21□□□□□ -1.58
ATRX-206ENST00000480283 SLC24A1O60721 1099 aa5.2□□□□□ -1.58
ATRX-206ENST00000480283 GOLGA3Q08378 1498 aa5.2□□□□□ -1.58
ATRX-206ENST00000480283 ATAD2BQ9ULI0 1458 aa5.19□□□□□ -1.58
ATRX-206ENST00000480283 KDM2AQ9Y2K7 1162 aa5.19□□□□□ -1.58
ATRX-206ENST00000480283 CHGAP10645 457 aaKnown RBP5.18□□□□□ -1.58
ATRX-206ENST00000480283 WIZO95785 1651 aa5.18□□□□□ -1.58
ATRX-206ENST00000480283 SALL2Q9Y467 1007 aaPredicted RBP5.18□□□□□ -1.58
ATRX-206ENST00000480283 CUX2O14529 1486 aa5.18□□□□□ -1.58
ATRX-206ENST00000480283 CARMIL1Q5VZK9 1371 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms