RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 AEBP2Q6ZN18 517 aaPredicted RBP18.97■□□□□ 0.63
ATRX-209ENST00000623242 CHIC1Q5VXU3 224 aa18.22■□□□□ 0.51
ATRX-209ENST00000623242 SENP3Q9H4L4 574 aaPredicted RBP16.23■□□□□ 0.19
ATRX-209ENST00000623242 PHF23Q9BUL5 403 aaPredicted RBP15.99■□□□□ 0.15
ATRX-209ENST00000623242 FOXD1Q16676 465 aa15.05■□□□□ -0
ATRX-209ENST00000623242 PLPPR3Q6T4P5 718 aa14.68□□□□□ -0.06
ATRX-209ENST00000623242 PPP6R1Q9UPN7 881 aa14.15□□□□□ -0.14
ATRX-209ENST00000623242 MSH5O43196 834 aa14.11□□□□□ -0.15
ATRX-209ENST00000623242 ADRA2BP18089 450 aa14.1□□□□□ -0.15
ATRX-209ENST00000623242 PIAS4Q8N2W9 510 aaPredicted RBP14.09□□□□□ -0.15
ATRX-209ENST00000623242 POTEDQ86YR6 584 aa13.45□□□□□ -0.26
ATRX-209ENST00000623242 KCNA4P22459 653 aa13.03□□□□□ -0.32
ATRX-209ENST00000623242 PPP4R3CPQ6ZMV5 832 aa13.01□□□□□ -0.33
ATRX-209ENST00000623242 SCAF1Q9H7N4 1312 aaKnown RBP13□□□□□ -0.33
ATRX-209ENST00000623242 MAPK8IP2Q13387 824 aaPredicted RBP12.89□□□□□ -0.35
ATRX-209ENST00000623242 DMRT2Q9Y5R5 561 aa12.89□□□□□ -0.35
ATRX-209ENST00000623242 NCBP3Q53F19 620 aaKnown RBP12.66□□□□□ -0.38
ATRX-209ENST00000623242 NPM3O75607 178 aaKnown RBP12.58□□□□□ -0.4
ATRX-209ENST00000623242 CNKSR2Q8WXI2 1034 aa12.57□□□□□ -0.4
ATRX-209ENST00000623242 HOXD11P31277 338 aaPredicted RBP12.5□□□□□ -0.41
ATRX-209ENST00000623242 RNF216Q9NWF9 866 aaPredicted RBP12.43□□□□□ -0.42
ATRX-209ENST00000623242 SLC4A1APQ9BWU0 796 aaKnown RBP12.41□□□□□ -0.42
ATRX-209ENST00000623242 EHMT2Q96KQ7 1210 aa12.38□□□□□ -0.43
ATRX-209ENST00000623242 DCAF8L1A6NGE4 600 aa12.36□□□□□ -0.43
ATRX-209ENST00000623242 DNAJC5BQ9UF47 199 aa12.16□□□□□ -0.46
ATRX-209ENST00000623242 CSRNP3Q8WYN3 585 aa12.15□□□□□ -0.46
ATRX-209ENST00000623242 ZBTB22O15209 634 aa12.05□□□□□ -0.48
ATRX-209ENST00000623242 RNF39Q9H2S5 420 aa12.03□□□□□ -0.48
ATRX-209ENST00000623242 CACNB1Q02641 598 aaPredicted RBP11.92□□□□□ -0.5
ATRX-209ENST00000623242 C1QBPQ07021 282 aaKnown RBP11.89□□□□□ -0.51
ATRX-209ENST00000623242 FOXD4L1Q9NU39 408 aa11.87□□□□□ -0.51
ATRX-209ENST00000623242 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.86□□□□□ -0.512e-7■■■□□ 14.9
ATRX-209ENST00000623242 SLC4A2P04920 1241 aa11.85□□□□□ -0.51
ATRX-209ENST00000623242 U3KPZ7 1027 aaPredicted RBP11.62□□□□□ -0.55
ATRX-209ENST00000623242 MYCNP04198 464 aaPredicted RBP11.56□□□□□ -0.56
ATRX-209ENST00000623242 ATXN8OSP0DMR3 200 aa11.41□□□□□ -0.58
ATRX-209ENST00000623242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.4□□□□□ -0.58
ATRX-209ENST00000623242 APLP2Q06481 763 aa11.4□□□□□ -0.58
ATRX-209ENST00000623242 HNRNPUL2Q1KMD3 747 aaKnown RBP11.4□□□□□ -0.58
ATRX-209ENST00000623242 CAPN15O75808 1086 aa11.39□□□□□ -0.59
ATRX-209ENST00000623242 SPINK5Q9NQ38 1064 aaPredicted RBP11.36□□□□□ -0.59
ATRX-209ENST00000623242 ATF5Q9Y2D1 282 aaPredicted RBP11.34□□□□□ -0.59
ATRX-209ENST00000623242 SAMD1Q6SPF0 538 aaPredicted RBP11.33□□□□□ -0.6
ATRX-209ENST00000623242 DSG3P32926 999 aa11.29□□□□□ -0.6
ATRX-209ENST00000623242 TRHP20396 242 aaPredicted RBP11.26□□□□□ -0.61
ATRX-209ENST00000623242 ZNF219Q9P2Y4 722 aaPredicted RBP11.26□□□□□ -0.61
ATRX-209ENST00000623242 ABCB7O75027 752 aa11.14□□□□□ -0.63
ATRX-209ENST00000623242 POLA2Q14181 598 aa10.95□□□□□ -0.66
ATRX-209ENST00000623242 FKBP8Q14318 412 aa10.92□□□□□ -0.66
ATRX-209ENST00000623242 MKRN4PQ13434 485 aaPredicted RBP10.85□□□□□ -0.67
ATRX-209ENST00000623242 RBM42Q9BTD8 480 aaKnown RBP10.82□□□□□ -0.68
ATRX-209ENST00000623242 ZBTB12Q9Y330 459 aaPredicted RBP10.82□□□□□ -0.68
ATRX-209ENST00000623242 FBLN2P98095 1184 aa10.7□□□□□ -0.7
ATRX-209ENST00000623242 SPDYE4A6NLX3 237 aa10.65□□□□□ -0.7
ATRX-209ENST00000623242 OSCARQ8IYS5 282 aa10.6□□□□□ -0.71
ATRX-209ENST00000623242 AKT1S1Q96B36 256 aa10.59□□□□□ -0.71
ATRX-209ENST00000623242 POTEHQ6S545 545 aa10.57□□□□□ -0.72
ATRX-209ENST00000623242 PROM2Q8N271 834 aa10.57□□□□□ -0.72
ATRX-209ENST00000623242 SPDYE2BA6NHP3 402 aa10.48□□□□□ -0.73
ATRX-209ENST00000623242 SPDYE6P0CI01 402 aa10.48□□□□□ -0.73
ATRX-209ENST00000623242 SPDYE2Q495Y8 402 aa10.48□□□□□ -0.73
ATRX-209ENST00000623242 CHRDL2Q6WN34 429 aa10.47□□□□□ -0.73
ATRX-209ENST00000623242 REM2Q8IYK8 340 aaPredicted RBP10.44□□□□□ -0.74
ATRX-209ENST00000623242 RTN4Q9NQC3 1192 aaKnown RBP10.43□□□□□ -0.74
ATRX-209ENST00000623242 ZNF692Q9BU19 519 aaPredicted RBP10.4□□□□□ -0.74
ATRX-209ENST00000623242 SSUH2Q9Y2M2 353 aa10.4□□□□□ -0.74
ATRX-209ENST00000623242 FBXO3Q9UK99 471 aa10.38□□□□□ -0.75
ATRX-209ENST00000623242 AMER1Q5JTC6 1135 aaPredicted RBP10.37□□□□□ -0.75
ATRX-209ENST00000623242 PITPNM1O00562 1244 aa10.32□□□□□ -0.76
ATRX-209ENST00000623242 VASPP50552 380 aaPredicted RBP10.31□□□□□ -0.76
ATRX-209ENST00000623242 PABPN1Q86U42 306 aaKnown RBP eCLIP10.29□□□□□ -0.76
ATRX-209ENST00000623242 FXR2P51116 673 aaKnown RBP eCLIP10.25□□□□□ -0.775e-8■■■□□ 15.2
ATRX-209ENST00000623242 SPDYE1Q8NFV5 336 aaPredicted RBP10.24□□□□□ -0.77
ATRX-209ENST00000623242 CLEC11AQ9Y240 323 aa10.24□□□□□ -0.77
ATRX-209ENST00000623242 IFNLR1Q8IU57 520 aaPredicted RBP10.23□□□□□ -0.77
ATRX-209ENST00000623242 PIP4P2Q8N4L2 257 aa10.23□□□□□ -0.77
ATRX-209ENST00000623242 STAG3Q9UJ98 1225 aa10.15□□□□□ -0.78
ATRX-209ENST00000623242 PRR29P0C7W0 189 aa10.06□□□□□ -0.8
ATRX-209ENST00000623242 PRKAR2AP13861 404 aaKnown RBP10.05□□□□□ -0.8
ATRX-209ENST00000623242 PLCD3Q8N3E9 789 aa10.05□□□□□ -0.8
ATRX-209ENST00000623242 MIER1Q8N108 512 aa10.04□□□□□ -0.8
ATRX-209ENST00000623242 KLHL34Q8N239 644 aa10.02□□□□□ -0.81
ATRX-209ENST00000623242 HAX1O00165 279 aa10.01□□□□□ -0.81
ATRX-209ENST00000623242 PKD2Q13563 968 aa10□□□□□ -0.81
ATRX-209ENST00000623242 SPOCK2Q92563 424 aa10□□□□□ -0.81
ATRX-209ENST00000623242 SP7Q8TDD2 431 aaPredicted RBP9.99□□□□□ -0.81
ATRX-209ENST00000623242 CHADLQ6NUI6 762 aa9.98□□□□□ -0.81
ATRX-209ENST00000623242 C19orf67A6NJJ6 358 aa9.91□□□□□ -0.82
ATRX-209ENST00000623242 CREBZFQ9NS37 354 aa9.91□□□□□ -0.82
ATRX-209ENST00000623242 PLEKHG5O94827 1062 aa9.87□□□□□ -0.83
ATRX-209ENST00000623242 MNX1P50219 401 aaPredicted RBP9.87□□□□□ -0.83
ATRX-209ENST00000623242 ZBTB47Q9UFB7 747 aaPredicted RBP9.86□□□□□ -0.83
ATRX-209ENST00000623242 EVX2Q03828 476 aa9.85□□□□□ -0.83
ATRX-209ENST00000623242 FARP1Q9Y4F1 1045 aaPredicted RBP9.85□□□□□ -0.83
ATRX-209ENST00000623242 NUBP1P53384 320 aa9.83□□□□□ -0.84
ATRX-209ENST00000623242 ECM2O94769 699 aaPredicted RBP9.81□□□□□ -0.84
ATRX-209ENST00000623242 SLC24A1O60721 1099 aa9.79□□□□□ -0.84
ATRX-209ENST00000623242 CIZ1Q9ULV3 898 aaPredicted RBP9.79□□□□□ -0.84
ATRX-209ENST00000623242 RGL2O15211 777 aa9.78□□□□□ -0.84
ATRX-209ENST00000623242 DCAF8L2P0C7V8 631 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms