RNA–Protein interactions for RNA: ENST00000576585.1

PRPF8-214, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 2,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-214ENST00000576585 NISCHQ9Y2I1 1504 aa28.59■■■□□ 2.17
PRPF8-214ENST00000576585 SLC24A1O60721 1099 aa25.24■■□□□ 1.63
PRPF8-214ENST00000576585 CCDC180Q9P1Z9 1646 aa25.2■■□□□ 1.62
PRPF8-214ENST00000576585 ABCC9O60706 1549 aa24.12■■□□□ 1.45
PRPF8-214ENST00000576585 ZCCHC6Q5VYS8 1495 aaKnown RBP23.93■■□□□ 1.42
PRPF8-214ENST00000576585 MYT1Q01538 1121 aa23.71■■□□□ 1.39
PRPF8-214ENST00000576585 DCAF1Q9Y4B6 1507 aa23.71■■□□□ 1.39
PRPF8-214ENST00000576585 MYO15BQ96JP2 1530 aa23.62■■□□□ 1.37
PRPF8-214ENST00000576585 DCAF8L2P0C7V8 631 aa23.59■■□□□ 1.37
PRPF8-214ENST00000576585 NACADO15069 1562 aa23.57■■□□□ 1.36
PRPF8-214ENST00000576585 TTBK1Q5TCY1 1321 aaPredicted RBP23.49■■□□□ 1.35
PRPF8-214ENST00000576585 RB1CC1Q8TDY2 1594 aa23.44■■□□□ 1.34
PRPF8-214ENST00000576585 PELP1Q8IZL8 1130 aaKnown RBP23.35■■□□□ 1.33
PRPF8-214ENST00000576585 DAXXQ9UER7 740 aaPredicted RBP23.34■■□□□ 1.33
PRPF8-214ENST00000576585 SHROOM4Q9ULL8 1493 aa23.12■■□□□ 1.29
PRPF8-214ENST00000576585 SCRIBQ14160 1630 aa22.99■■□□□ 1.27
PRPF8-214ENST00000576585 UNC13AQ9UPW8 1703 aa22.97■■□□□ 1.27
PRPF8-214ENST00000576585 PRKCSHP14314 528 aaPredicted RBP22.9■■□□□ 1.26
PRPF8-214ENST00000576585 APLP2Q06481 763 aa22.89■■□□□ 1.26
PRPF8-214ENST00000576585 BICRAQ9NZM4 1560 aa22.77■■□□□ 1.24
PRPF8-214ENST00000576585 ERICH6Q7L0X2 663 aa22.77■■□□□ 1.24
PRPF8-214ENST00000576585 PABPN1Q86U42 306 aaKnown RBP eCLIP22.63■■□□□ 1.21
PRPF8-214ENST00000576585 EHMT2Q96KQ7 1210 aa22.5■■□□□ 1.19
PRPF8-214ENST00000576585 NCBP3Q53F19 620 aaKnown RBP22.45■■□□□ 1.18
PRPF8-214ENST00000576585 PLPPR3Q6T4P5 718 aa22.25■■□□□ 1.15
PRPF8-214ENST00000576585 SUPT5HO00267 1087 aaKnown RBP22.23■■□□□ 1.15
PRPF8-214ENST00000576585 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
PRPF8-214ENST00000576585 RTN4Q9NQC3 1192 aaKnown RBP22.21■■□□□ 1.15
PRPF8-214ENST00000576585 BAZ1AQ9NRL2 1556 aaPredicted RBP22.1■■□□□ 1.13
PRPF8-214ENST00000576585 EIF4G1Q04637 1599 aaKnown RBP22.09■■□□□ 1.13
PRPF8-214ENST00000576585 SMARCA4P51532 1647 aa22.07■■□□□ 1.12
PRPF8-214ENST00000576585 MROH2BQ7Z745 1585 aa22.05■■□□□ 1.12
PRPF8-214ENST00000576585 RSF1Q96T23 1441 aaPredicted RBP21.98■■□□□ 1.11
PRPF8-214ENST00000576585 PEG3Q9GZU2 1588 aa21.88■■□□□ 1.09
PRPF8-214ENST00000576585 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
PRPF8-214ENST00000576585 ATAD2BQ9ULI0 1458 aa21.83■■□□□ 1.09
PRPF8-214ENST00000576585 WIZO95785 1651 aa21.83■■□□□ 1.08
PRPF8-214ENST00000576585 SMARCA2P51531 1590 aa21.81■■□□□ 1.08
PRPF8-214ENST00000576585 ARXQ96QS3 562 aa21.77■■□□□ 1.08
PRPF8-214ENST00000576585 NCAPD3P42695 1498 aa21.75■■□□□ 1.07
PRPF8-214ENST00000576585 DNAJC5BQ9UF47 199 aa21.74■■□□□ 1.07
PRPF8-214ENST00000576585 HMGXB3Q12766 1538 aa21.67■■□□□ 1.06
PRPF8-214ENST00000576585 BAZ1BQ9UIG0 1483 aaKnown RBP21.64■■□□□ 1.05
PRPF8-214ENST00000576585 AMER1Q5JTC6 1135 aaPredicted RBP21.63■■□□□ 1.05
PRPF8-214ENST00000576585 TOP2AP11388 1531 aaKnown RBP21.62■■□□□ 1.05
PRPF8-214ENST00000576585 EIF5BO60841 1220 aaKnown RBP21.51■■□□□ 1.03
PRPF8-214ENST00000576585 CHIC1Q5VXU3 224 aa21.48■■□□□ 1.03
PRPF8-214ENST00000576585 TIMELESSQ9UNS1 1208 aa21.41■■□□□ 1.02
PRPF8-214ENST00000576585 RANGAP1P46060 587 aaPredicted RBP21.4■■□□□ 1.02
PRPF8-214ENST00000576585 CCDC88BA6NC98 1476 aa21.37■■□□□ 1.01
PRPF8-214ENST00000576585 CADPSQ9ULU8 1353 aa21.12■□□□□ 0.97
PRPF8-214ENST00000576585 CFTRP13569 1480 aa21.12■□□□□ 0.97
PRPF8-214ENST00000576585 KCNA4P22459 653 aa21.07■□□□□ 0.96
PRPF8-214ENST00000576585 LAMC3Q9Y6N6 1575 aa21.07■□□□□ 0.96
PRPF8-214ENST00000576585 NESP48681 1621 aa21.05■□□□□ 0.96
PRPF8-214ENST00000576585 TULP1O00294 542 aaPredicted RBP21.03■□□□□ 0.96
PRPF8-214ENST00000576585 HOMEZQ8IX15 550 aa21.02■□□□□ 0.96
PRPF8-214ENST00000576585 KLHL34Q8N239 644 aa21.02■□□□□ 0.96
PRPF8-214ENST00000576585 PRDM2Q13029 1718 aa21■□□□□ 0.95
PRPF8-214ENST00000576585 BCL11AQ9H165 835 aa20.89■□□□□ 0.94
PRPF8-214ENST00000576585 PDS5BQ9NTI5 1447 aa20.89■□□□□ 0.93
PRPF8-214ENST00000576585 FANCD2Q9BXW9 1451 aa20.87■□□□□ 0.93
PRPF8-214ENST00000576585 TRIM41Q8WV44 630 aa20.85■□□□□ 0.93
PRPF8-214ENST00000576585 KIF21AQ7Z4S6 1674 aa20.82■□□□□ 0.92
PRPF8-214ENST00000576585 TAOK2Q9UL54 1235 aa20.81■□□□□ 0.92
PRPF8-214ENST00000576585 ABCC8Q09428 1581 aa20.78■□□□□ 0.92
PRPF8-214ENST00000576585 CEP164Q9UPV0 1460 aa20.78■□□□□ 0.92
PRPF8-214ENST00000576585 PLEKHG5O94827 1062 aa20.75■□□□□ 0.91
PRPF8-214ENST00000576585 CSRNP3Q8WYN3 585 aa20.74■□□□□ 0.91
PRPF8-214ENST00000576585 ERCC6Q03468 1493 aa20.71■□□□□ 0.91
PRPF8-214ENST00000576585 PODXL2Q9NZ53 605 aa20.7■□□□□ 0.91
PRPF8-214ENST00000576585 WRNQ14191 1432 aaPredicted RBP eCLIP20.68■□□□□ 0.9
PRPF8-214ENST00000576585 MRC2Q9UBG0 1479 aa20.65■□□□□ 0.9
PRPF8-214ENST00000576585 CUX1P39880 1505 aa20.65■□□□□ 0.9
PRPF8-214ENST00000576585 URB2Q14146 1524 aaKnown RBP20.65■□□□□ 0.9
PRPF8-214ENST00000576585 THOC2Q8NI27 1593 aaKnown RBP20.63■□□□□ 0.89
PRPF8-214ENST00000576585 SYNJ1O43426 1573 aa20.62■□□□□ 0.89
PRPF8-214ENST00000576585 DNMBPQ6XZF7 1577 aa20.62■□□□□ 0.89
PRPF8-214ENST00000576585 BIVM-ERCC5R4GMW8 1640 aa20.61■□□□□ 0.89
PRPF8-214ENST00000576585 TOPBP1Q92547 1522 aa20.6■□□□□ 0.89
PRPF8-214ENST00000576585 TOP2BQ02880 1626 aa20.6■□□□□ 0.89
PRPF8-214ENST00000576585 WDR62O43379 1518 aa20.59■□□□□ 0.89
PRPF8-214ENST00000576585 FAM9AQ8IZU1 332 aaPredicted RBP20.55■□□□□ 0.88
PRPF8-214ENST00000576585 LOC105371045A0A1W2PR82 267 aa20.51■□□□□ 0.87
PRPF8-214ENST00000576585 FGD5Q6ZNL6 1462 aa20.48■□□□□ 0.87
PRPF8-214ENST00000576585 POLA1P09884 1462 aaPredicted RBP20.46■□□□□ 0.87
PRPF8-214ENST00000576585 TPRNQ4KMQ1 711 aa20.45■□□□□ 0.86
PRPF8-214ENST00000576585 BCANQ96GW7 911 aa20.45■□□□□ 0.86
PRPF8-214ENST00000576585 CUX2O14529 1486 aa20.42■□□□□ 0.86
PRPF8-214ENST00000576585 SOGA1O94964 1423 aa20.39■□□□□ 0.85
PRPF8-214ENST00000576585 RAD54L2Q9Y4B4 1467 aa20.37■□□□□ 0.85
PRPF8-214ENST00000576585 TARBP1Q13395 1621 aaKnown RBP20.36■□□□□ 0.85
PRPF8-214ENST00000576585 IFT140Q96RY7 1462 aa20.33■□□□□ 0.85
PRPF8-214ENST00000576585 RUSC2Q8N2Y8 1516 aa20.33■□□□□ 0.85
PRPF8-214ENST00000576585 WDR97A6NE52 1622 aa20.32■□□□□ 0.84
PRPF8-214ENST00000576585 ABCA10Q8WWZ4 1543 aa20.32■□□□□ 0.84
PRPF8-214ENST00000576585 NPM2Q86SE8 214 aaKnown RBP20.3■□□□□ 0.84
PRPF8-214ENST00000576585 GTF3C3Q9Y5Q9 886 aa20.28■□□□□ 0.84
PRPF8-214ENST00000576585 EEA1Q15075 1411 aa20.21■□□□□ 0.83
PRPF8-214ENST00000576585 ZNF608Q9ULD9 1512 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms