Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.116e-6■■■■□ 22.5
U2AF2P26368 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC8.13□□□□□ -1.116e-6■■■■□ 22.5
U2AF2P26368 TTC8-209ENST00000554686 1859 ntTSL 58.07□□□□□ -1.126e-6■■■■□ 22.5
U2AF2P26368 PPM1A-204ENST00000525399 854 ntTSL 38.06□□□□□ -1.128e-11■■■■□ 22.5
U2AF2P26368 RCL1-209ENST00000473230 441 ntTSL 38.03□□□□□ -1.126e-6■■■■□ 22.5
U2AF2P26368 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.98□□□□□ -1.136e-6■■■■□ 22.5
U2AF2P26368 SMARCE1-201ENST00000264640 631 ntTSL 37.94□□□□□ -1.148e-11■■■■□ 22.5
U2AF2P26368 CPS1-210ENST00000518043 585 ntTSL 27.89□□□□□ -1.156e-6■■■■□ 22.5
U2AF2P26368 CPS1-202ENST00000417946 699 ntTSL 37.89□□□□□ -1.156e-6■■■■□ 22.5
U2AF2P26368 TMBIM6-226ENST00000552635 574 ntTSL 47.88□□□□□ -1.156e-6■■■■□ 22.5
U2AF2P26368 MIER3-201ENST00000336942 601 ntTSL 57.87□□□□□ -1.156e-6■■■■□ 22.5
U2AF2P26368 VPS50-218ENST00000485994 573 ntTSL 27.86□□□□□ -1.156e-6■■■■□ 22.5
U2AF2P26368 ZNF542P-208ENST00000587208 572 ntTSL 47.69□□□□□ -1.186e-6■■■■□ 22.5
U2AF2P26368 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.64□□□□□ -1.196e-6■■■■□ 22.5
U2AF2P26368 CHURC1-FNTB-204ENST00000553743 207 ntTSL 27.56□□□□□ -1.26e-6■■■■□ 22.5
U2AF2P26368 TMBIM6-206ENST00000546914 521 ntTSL 47.54□□□□□ -1.26e-6■■■■□ 22.5
U2AF2P26368 TMBIM6-210ENST00000547832 640 ntTSL 37.39□□□□□ -1.236e-6■■■■□ 22.5
U2AF2P26368 HSD17B4-227ENST00000522415 900 ntTSL 57.37□□□□□ -1.236e-6■■■■□ 22.5
U2AF2P26368 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.22□□□□□ -1.256e-6■■■■□ 22.5
U2AF2P26368 RAB28-204ENST00000504644 405 ntTSL 57.21□□□□□ -1.266e-6■■■■□ 22.5
U2AF2P26368 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.2□□□□□ -1.266e-6■■■■□ 22.5
U2AF2P26368 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.266e-6■■■■□ 22.5
U2AF2P26368 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.15□□□□□ -1.276e-6■■■■□ 22.5
U2AF2P26368 LRBA-203ENST00000503716 3712 ntTSL 1 (best)7.09□□□□□ -1.276e-6■■■■□ 22.5
U2AF2P26368 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.07□□□□□ -1.286e-6■■■■□ 22.5
U2AF2P26368 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.07□□□□□ -1.286e-6■■■■□ 22.5
U2AF2P26368 RAB28-207ENST00000511649 715 ntTSL 57.05□□□□□ -1.286e-6■■■■□ 22.5
U2AF2P26368 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.286e-6■■■■□ 22.5
U2AF2P26368 PPP6C-204ENST00000456642 569 ntTSL 36.92□□□□□ -1.36e-6■■■■□ 22.5
U2AF2P26368 VPS50-215ENST00000480943 801 ntTSL 56.74□□□□□ -1.336e-6■■■■□ 22.5
U2AF2P26368 EDRF1-213ENST00000530795 945 ntTSL 56.61□□□□□ -1.356e-6■■■■□ 22.5
U2AF2P26368 ENTPD1-AS1-208ENST00000451364 716 ntTSL 26.49□□□□□ -1.376e-6■■■■□ 22.5
U2AF2P26368 PEX19-203ENST00000462644 904 ntTSL 36.47□□□□□ -1.376e-6■■■■□ 22.5
U2AF2P26368 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.396e-6■■■■□ 22.5
U2AF2P26368 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.396e-6■■■■□ 22.5
U2AF2P26368 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.396e-6■■■■□ 22.5
U2AF2P26368 NUDCD1-204ENST00000521439 1172 ntTSL 1 (best)6.24□□□□□ -1.416e-6■■■■□ 22.5
U2AF2P26368 ITCH-206ENST00000486883 703 ntTSL 25.95□□□□□ -1.466e-6■■■■□ 22.5
U2AF2P26368 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.81□□□□□ -1.486e-6■■■■□ 22.5
U2AF2P26368 ZNF542P-201ENST00000462524 555 ntTSL 45.72□□□□□ -1.496e-6■■■■□ 22.5
U2AF2P26368 PPM1A-208ENST00000532036 1561 ntTSL 55.67□□□□□ -1.58e-11■■■■□ 22.5
U2AF2P26368 ANKHD1-216ENST00000490185 829 ntTSL 25.67□□□□□ -1.56e-6■■■■□ 22.5
U2AF2P26368 PPM1A-207ENST00000531937 569 ntTSL 45.6□□□□□ -1.518e-11■■■■□ 22.5
U2AF2P26368 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.566e-6■■■■□ 22.5
U2AF2P26368 NAPEPLD-206ENST00000422589 2672 ntTSL 1 (best)5.22□□□□□ -1.576e-6■■■■□ 22.5
U2AF2P26368 MIER3-207ENST00000451637 304 ntTSL 54.83□□□□□ -1.646e-6■■■■□ 22.5
U2AF2P26368 PSMD1-212ENST00000491229 546 ntTSL 24.64□□□□□ -1.676e-6■■■■□ 22.5
U2AF2P26368 CBLB-209ENST00000476370 4722 ntTSL 1 (best)4.56□□□□□ -1.686e-6■■■■□ 22.5
U2AF2P26368 FBXL21-207ENST00000498734 724 ntTSL 24.48□□□□□ -1.696e-6■■■■□ 22.5
U2AF2P26368 VPS50-214ENST00000477935 760 ntTSL 24.48□□□□□ -1.696e-6■■■■□ 22.5
U2AF2P26368 C5orf22-203ENST00000504866 2447 ntTSL 1 (best)4.44□□□□□ -1.76e-6■■■■□ 22.5
U2AF2P26368 SORBS2-253ENST00000485380 658 ntTSL 24.27□□□□□ -1.736e-6■■■■□ 22.5
U2AF2P26368 ZNF542P-204ENST00000482727 1305 ntBASIC4.05□□□□□ -1.766e-6■■■■□ 22.5
U2AF2P26368 DROSHA-205ENST00000505601 552 ntTSL 44.01□□□□□ -1.776e-6■■■■□ 22.5
U2AF2P26368 TTC8-212ENST00000556133 607 ntTSL 33.83□□□□□ -1.86e-6■■■■□ 22.5
U2AF2P26368 DNAJB11-203ENST00000464877 639 ntTSL 23.8□□□□□ -1.86e-6■■■■□ 22.5
U2AF2P26368 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.817e-7■■■■□ 22.5
U2AF2P26368 MIER3-208ENST00000452157 5240 ntTSL 1 (best)3.73□□□□□ -1.816e-6■■■■□ 22.5
U2AF2P26368 CPS1-211ENST00000523702 546 ntTSL 43.71□□□□□ -1.826e-6■■■■□ 22.5
U2AF2P26368 PROM1-216ENST00000513946 581 ntTSL 33.62□□□□□ -1.836e-6■■■■□ 22.5
U2AF2P26368 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.96e-6■■■■□ 22.5
U2AF2P26368 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.96e-6■■■■□ 22.5
U2AF2P26368 MCM9-207ENST00000505446 470 ntTSL 23.11□□□□□ -1.916e-6■■■■□ 22.5
U2AF2P26368 ZNF280D-211ENST00000560002 4040 ntTSL 53.08□□□□□ -1.927e-7■■■■□ 22.5
U2AF2P26368 CLOCK-209ENST00000511124 3932 ntTSL 1 (best)2.93□□□□□ -1.948e-11■■■■□ 22.5
U2AF2P26368 SORBS2-262ENST00000494140 538 ntTSL 42.9□□□□□ -1.956e-6■■■■□ 22.5
U2AF2P26368 CHURC1-FNTB-202ENST00000551823 517 ntTSL 22.85□□□□□ -1.956e-6■■■■□ 22.5
U2AF2P26368 UBE2F-221ENST00000480828 802 ntTSL 22.8□□□□□ -1.966e-6■■■■□ 22.5
U2AF2P26368 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.986e-6■■■■□ 22.5
U2AF2P26368 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.066e-6■■■■□ 22.5
U2AF2P26368 DROSHA-206ENST00000507174 572 ntTSL 41.85□□□□□ -2.116e-6■■■■□ 22.5
U2AF2P26368 CDC42SE2-203ENST00000502582 277 ntTSL 31.66□□□□□ -2.146e-6■■■■□ 22.5
U2AF2P26368 SORBS2-245ENST00000466289 1031 ntTSL 21.53□□□□□ -2.166e-6■■■■□ 22.5
U2AF2P26368 TM9SF3-203ENST00000464654 658 ntTSL 51.43□□□□□ -2.182e-7■■■■□ 22.5
U2AF2P26368 TNRC6A-210ENST00000563201 276 ntTSL 31.38□□□□□ -2.196e-6■■■■□ 22.5
U2AF2P26368 TTC19-208ENST00000497842 1360 ntTSL 532.7■■■□□ 2.829e-7■■■■□ 22.5
U2AF2P26368 TTC19-206ENST00000475723 2591 ntTSL 225.34■■□□□ 1.659e-7■■■■□ 22.5
U2AF2P26368 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.29e-7■■■■□ 22.5
U2AF2P26368 C10orf10-203ENST00000496638 868 ntTSL 324.49■■□□□ 1.515e-10■■■■□ 22.5
U2AF2P26368 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.179e-7■■■■□ 22.5
U2AF2P26368 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.869e-7■■■■□ 22.5
U2AF2P26368 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.829e-7■■■■□ 22.5
U2AF2P26368 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.755e-10■■■■□ 22.5
U2AF2P26368 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.79e-7■■■■□ 22.5
U2AF2P26368 DMKN-255ENST00000490622 1579 ntTSL 218.34■□□□□ 0.539e-7■■■■□ 22.5
U2AF2P26368 DMKN-264ENST00000597212 638 ntTSL 317■□□□□ 0.319e-7■■■■□ 22.5
U2AF2P26368 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.099e-7■■■■□ 22.5
U2AF2P26368 DMKN-228ENST00000467532 877 ntTSL 315.54■□□□□ 0.089e-7■■■■□ 22.5
U2AF2P26368 DMKN-220ENST00000462126 622 ntTSL 315.32■□□□□ 0.049e-7■■■■□ 22.5
U2AF2P26368 DMKN-251ENST00000488542 1074 ntTSL 315.32■□□□□ 0.049e-7■■■■□ 22.5
U2AF2P26368 DMKN-203ENST00000402589 935 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.049e-7■■■■□ 22.5
U2AF2P26368 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -09e-7■■■■□ 22.5
U2AF2P26368 C10orf10-202ENST00000448778 613 ntTSL 314.9□□□□□ -0.025e-10■■■■□ 22.5
U2AF2P26368 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.219e-7■■■■□ 22.5
U2AF2P26368 DMKN-222ENST00000462721 970 ntTSL 1 (best)12.56□□□□□ -0.49e-7■■■■□ 22.5
U2AF2P26368 DMKN-252ENST00000488762 691 ntTSL 312.51□□□□□ -0.419e-7■■■■□ 22.5
U2AF2P26368 DMKN-237ENST00000472252 593 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.689e-7■■■■□ 22.5
U2AF2P26368 DMKN-205ENST00000414866 867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.769e-7■■■■□ 22.5
U2AF2P26368 ANKRD17-206ENST00000514252 3259 ntTSL 26.4□□□□□ -1.384e-7■■■■□ 22.5
U2AF2P26368 TRIO-221ENST00000513206 7995 ntTSL 518.06■□□□□ 0.481e-6■■■■□ 22.5
Retrieved 100 of 36,523 protein–RNA pairs in 329.4 ms