RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 AEBP2Q6ZN18 517 aaPredicted RBP7□□□□□ -1.29
CLOCK-209ENST00000511124 CHIC1Q5VXU3 224 aa6.67□□□□□ -1.34
CLOCK-209ENST00000511124 NISCHQ9Y2I1 1504 aa6.11□□□□□ -1.43
CLOCK-209ENST00000511124 PHF23Q9BUL5 403 aaPredicted RBP6.09□□□□□ -1.43
CLOCK-209ENST00000511124 CCDC180Q9P1Z9 1646 aa5.61□□□□□ -1.51
CLOCK-209ENST00000511124 DCAF8L2P0C7V8 631 aa5.6□□□□□ -1.51
CLOCK-209ENST00000511124 ABCC9O60706 1549 aa5.59□□□□□ -1.51
CLOCK-209ENST00000511124 SENP3Q9H4L4 574 aaPredicted RBP5.53□□□□□ -1.52
CLOCK-209ENST00000511124 SHROOM4Q9ULL8 1493 aa5.49□□□□□ -1.53
CLOCK-209ENST00000511124 RB1CC1Q8TDY2 1594 aa5.42□□□□□ -1.54
CLOCK-209ENST00000511124 NACADO15069 1562 aa5.35□□□□□ -1.55
CLOCK-209ENST00000511124 FOXD1Q16676 465 aa5.34□□□□□ -1.56
CLOCK-209ENST00000511124 UNC13AQ9UPW8 1703 aa5.33□□□□□ -1.56
CLOCK-209ENST00000511124 MYO15BQ96JP2 1530 aa5.32□□□□□ -1.56
CLOCK-209ENST00000511124 PPP6R1Q9UPN7 881 aa5.26□□□□□ -1.57
CLOCK-209ENST00000511124 PABPN1Q86U42 306 aaKnown RBP eCLIP5.23□□□□□ -1.57
CLOCK-209ENST00000511124 POTEDQ86YR6 584 aa5.22□□□□□ -1.57
CLOCK-209ENST00000511124 PLPPR3Q6T4P5 718 aa5.2□□□□□ -1.58
CLOCK-209ENST00000511124 FAM9AQ8IZU1 332 aaPredicted RBP5.14□□□□□ -1.59
CLOCK-209ENST00000511124 CECR2Q9BXF3 1484 aa5.11□□□□□ -1.59
CLOCK-209ENST00000511124 DCAF1Q9Y4B6 1507 aa5.1□□□□□ -1.59
CLOCK-209ENST00000511124 ERCC6Q03468 1493 aa5.09□□□□□ -1.59
CLOCK-209ENST00000511124 ADRA2BP18089 450 aa5.09□□□□□ -1.6
CLOCK-209ENST00000511124 BICRAQ9NZM4 1560 aa5.08□□□□□ -1.6
CLOCK-209ENST00000511124 SCRIBQ14160 1630 aa5.05□□□□□ -1.6
CLOCK-209ENST00000511124 CUX2O14529 1486 aa5.04□□□□□ -1.6
CLOCK-209ENST00000511124 ZCCHC6Q5VYS8 1495 aaKnown RBP5.01□□□□□ -1.61
CLOCK-209ENST00000511124 DNAJC5BQ9UF47 199 aa5□□□□□ -1.61
CLOCK-209ENST00000511124 PDS5BQ9NTI5 1447 aa4.99□□□□□ -1.61
CLOCK-209ENST00000511124 DNAJC5Q9H3Z4 198 aa4.98□□□□□ -1.61
CLOCK-209ENST00000511124 SMARCA2P51531 1590 aa4.96□□□□□ -1.62
CLOCK-209ENST00000511124 EIF4G1Q04637 1599 aaKnown RBP4.94□□□□□ -1.62
CLOCK-209ENST00000511124 CC2D2AQ9P2K1 1620 aa4.93□□□□□ -1.62
CLOCK-209ENST00000511124 BAZ1BQ9UIG0 1483 aaKnown RBP4.91□□□□□ -1.62
CLOCK-209ENST00000511124 OSCARQ8IYS5 282 aa4.91□□□□□ -1.62
CLOCK-209ENST00000511124 NPM1P06748 294 aaKnown RBP eCLIP4.9□□□□□ -1.62
CLOCK-209ENST00000511124 TRIM41Q8WV44 630 aa4.9□□□□□ -1.63
CLOCK-209ENST00000511124 THOC2Q8NI27 1593 aaKnown RBP4.88□□□□□ -1.63
CLOCK-209ENST00000511124 NCAPD3P42695 1498 aa4.88□□□□□ -1.63
CLOCK-209ENST00000511124 BAZ1AQ9NRL2 1556 aaPredicted RBP4.88□□□□□ -1.63
CLOCK-209ENST00000511124 TRHP20396 242 aaPredicted RBP4.86□□□□□ -1.63
CLOCK-209ENST00000511124 ABCC8Q09428 1581 aa4.84□□□□□ -1.63
CLOCK-209ENST00000511124 FBLN2P98095 1184 aa4.83□□□□□ -1.64
CLOCK-209ENST00000511124 HMGXB3Q12766 1538 aa4.82□□□□□ -1.64
CLOCK-209ENST00000511124 CADPSQ9ULU8 1353 aa4.82□□□□□ -1.64
CLOCK-209ENST00000511124 ATAD2BQ9ULI0 1458 aa4.81□□□□□ -1.64
CLOCK-209ENST00000511124 CEP164Q9UPV0 1460 aa4.8□□□□□ -1.64
CLOCK-209ENST00000511124 LAMC3Q9Y6N6 1575 aa4.8□□□□□ -1.64
CLOCK-209ENST00000511124 CHMP7Q8WUX9 453 aaPredicted RBP4.8□□□□□ -1.64
CLOCK-209ENST00000511124 MSH5O43196 834 aa4.8□□□□□ -1.64
CLOCK-209ENST00000511124 MRC2Q9UBG0 1479 aa4.79□□□□□ -1.64
CLOCK-209ENST00000511124 PRDM2Q13029 1718 aa4.77□□□□□ -1.65
CLOCK-209ENST00000511124 PEG3Q9GZU2 1588 aa4.74□□□□□ -1.65
CLOCK-209ENST00000511124 SMARCA4P51532 1647 aa4.73□□□□□ -1.65
CLOCK-209ENST00000511124 IFT140Q96RY7 1462 aa4.72□□□□□ -1.65
CLOCK-209ENST00000511124 FANCD2Q9BXW9 1451 aa4.71□□□□□ -1.66
CLOCK-209ENST00000511124 PIAS4Q8N2W9 510 aaPredicted RBP4.71□□□□□ -1.66
CLOCK-209ENST00000511124 CYB5RLQ6IPT4 315 aa4.7□□□□□ -1.66
CLOCK-209ENST00000511124 WDR97A6NE52 1622 aa4.7□□□□□ -1.66
CLOCK-209ENST00000511124 ESF1Q9H501 851 aaKnown RBP4.66□□□□□ -1.66
CLOCK-209ENST00000511124 SUPT5HO00267 1087 aaKnown RBP4.65□□□□□ -1.66
CLOCK-209ENST00000511124 RSF1Q96T23 1441 aaPredicted RBP4.64□□□□□ -1.67
CLOCK-209ENST00000511124 SOGA1O94964 1423 aa4.64□□□□□ -1.67
CLOCK-209ENST00000511124 CARMIL2Q6F5E8 1435 aa4.64□□□□□ -1.67
CLOCK-209ENST00000511124 HOXD11P31277 338 aaPredicted RBP4.64□□□□□ -1.67
CLOCK-209ENST00000511124 CFTRP13569 1480 aa4.63□□□□□ -1.67
CLOCK-209ENST00000511124 MYT1LQ9UL68 1186 aa4.63□□□□□ -1.67
CLOCK-209ENST00000511124 TOP2AP11388 1531 aaKnown RBP4.63□□□□□ -1.67
CLOCK-209ENST00000511124 KCNA4P22459 653 aa4.62□□□□□ -1.67
CLOCK-209ENST00000511124 MROH2BQ7Z745 1585 aa4.62□□□□□ -1.67
CLOCK-209ENST00000511124 PPP4R3CPQ6ZMV5 832 aa4.62□□□□□ -1.67
CLOCK-209ENST00000511124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.62□□□□□ -1.67
CLOCK-209ENST00000511124 HNRNPUL2Q1KMD3 747 aaKnown RBP4.62□□□□□ -1.67
CLOCK-209ENST00000511124 CDK11AQ9UQ88 783 aaPredicted RBP4.62□□□□□ -1.67
CLOCK-209ENST00000511124 DMRT2Q9Y5R5 561 aa4.62□□□□□ -1.67
CLOCK-209ENST00000511124 WRNQ14191 1432 aaPredicted RBP eCLIP4.62□□□□□ -1.67
CLOCK-209ENST00000511124 SYNJ1O43426 1573 aa4.62□□□□□ -1.67
CLOCK-209ENST00000511124 NESP48681 1621 aa4.61□□□□□ -1.67
CLOCK-209ENST00000511124 MAPK8IP2Q13387 824 aaPredicted RBP4.61□□□□□ -1.67
CLOCK-209ENST00000511124 WDR62O43379 1518 aa4.61□□□□□ -1.67
CLOCK-209ENST00000511124 GRIN2BQ13224 1484 aa4.61□□□□□ -1.67
CLOCK-209ENST00000511124 MAGI1Q96QZ7 1491 aaPredicted RBP4.59□□□□□ -1.67
CLOCK-209ENST00000511124 NPM3O75607 178 aaKnown RBP4.57□□□□□ -1.68
CLOCK-209ENST00000511124 DNMBPQ6XZF7 1577 aa4.57□□□□□ -1.68
CLOCK-209ENST00000511124 FAM69CQ0P6D2 419 aa4.56□□□□□ -1.68
CLOCK-209ENST00000511124 TTBK1Q5TCY1 1321 aaPredicted RBP4.55□□□□□ -1.68
CLOCK-209ENST00000511124 TOPBP1Q92547 1522 aa4.55□□□□□ -1.68
CLOCK-209ENST00000511124 KIF27Q86VH2 1401 aa4.55□□□□□ -1.68
CLOCK-209ENST00000511124 KDM6BO15054 1643 aa4.55□□□□□ -1.68
CLOCK-209ENST00000511124 APLP2Q06481 763 aa4.54□□□□□ -1.68
CLOCK-209ENST00000511124 JPH4Q96JJ6 628 aa4.54□□□□□ -1.68
CLOCK-209ENST00000511124 SYNJ2O15056 1496 aa4.54□□□□□ -1.68
CLOCK-209ENST00000511124 GAPVD1Q14C86 1478 aa4.54□□□□□ -1.68
CLOCK-209ENST00000511124 TDRD9Q8NDG6 1382 aaKnown RBP4.54□□□□□ -1.68
CLOCK-209ENST00000511124 ARID4BQ4LE39 1312 aaPredicted RBP4.54□□□□□ -1.68
CLOCK-209ENST00000511124 ZBTB22O15209 634 aa4.54□□□□□ -1.68
CLOCK-209ENST00000511124 FHAD1B1AJZ9 1412 aa4.54□□□□□ -1.68
CLOCK-209ENST00000511124 TEX14Q8IWB6 1497 aa4.52□□□□□ -1.69
CLOCK-209ENST00000511124 POGZQ7Z3K3 1410 aa4.52□□□□□ -1.69
CLOCK-209ENST00000511124 RIMBP3CA6NJZ7 1639 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms