RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 NISCHQ9Y2I1 1504 aa16.57■□□□□ 0.24
CDC42SE2-201ENST00000360515 CCDC180Q9P1Z9 1646 aa15.45■□□□□ 0.06
CDC42SE2-201ENST00000360515 ABCC9O60706 1549 aa14.99□□□□□ -0.01
CDC42SE2-201ENST00000360515 RB1CC1Q8TDY2 1594 aa14.59□□□□□ -0.07
CDC42SE2-201ENST00000360515 NACADO15069 1562 aa14.5□□□□□ -0.09
CDC42SE2-201ENST00000360515 MYO15BQ96JP2 1530 aa14.48□□□□□ -0.09
CDC42SE2-201ENST00000360515 UNC13AQ9UPW8 1703 aa14.41□□□□□ -0.1
CDC42SE2-201ENST00000360515 DNAJC5BQ9UF47 199 aa14.39□□□□□ -0.11
CDC42SE2-201ENST00000360515 SHROOM4Q9ULL8 1493 aa14.38□□□□□ -0.11
CDC42SE2-201ENST00000360515 BICRAQ9NZM4 1560 aa14.25□□□□□ -0.13
CDC42SE2-201ENST00000360515 DCAF1Q9Y4B6 1507 aa14.06□□□□□ -0.16
CDC42SE2-201ENST00000360515 CC2D2AQ9P2K1 1620 aa13.87□□□□□ -0.19
CDC42SE2-201ENST00000360515 EIF4G1Q04637 1599 aaKnown RBP13.79□□□□□ -0.2
CDC42SE2-201ENST00000360515 ZCCHC6Q5VYS8 1495 aaKnown RBP13.73□□□□□ -0.21
CDC42SE2-201ENST00000360515 CECR2Q9BXF3 1484 aa13.72□□□□□ -0.21
CDC42SE2-201ENST00000360515 DNAJC5Q9H3Z4 198 aa13.68□□□□□ -0.22
CDC42SE2-201ENST00000360515 PABPN1Q86U42 306 aaKnown RBP eCLIP13.61□□□□□ -0.23
CDC42SE2-201ENST00000360515 CUX2O14529 1486 aa13.6□□□□□ -0.23
CDC42SE2-201ENST00000360515 SCRIBQ14160 1630 aa13.41□□□□□ -0.26
CDC42SE2-201ENST00000360515 NCAPD3P42695 1498 aa13.3□□□□□ -0.28
CDC42SE2-201ENST00000360515 HMGXB3Q12766 1538 aa13.3□□□□□ -0.28
CDC42SE2-201ENST00000360515 THOC2Q8NI27 1593 aaKnown RBP13.25□□□□□ -0.29
CDC42SE2-201ENST00000360515 PEG3Q9GZU2 1588 aa13.23□□□□□ -0.29
CDC42SE2-201ENST00000360515 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
CDC42SE2-201ENST00000360515 LAMC3Q9Y6N6 1575 aa13.12□□□□□ -0.31
CDC42SE2-201ENST00000360515 ATAD2BQ9ULI0 1458 aa13.06□□□□□ -0.32
CDC42SE2-201ENST00000360515 SMARCA4P51532 1647 aa13.06□□□□□ -0.32
CDC42SE2-201ENST00000360515 DCAF8L2P0C7V8 631 aa13.01□□□□□ -0.33
CDC42SE2-201ENST00000360515 ERCC6Q03468 1493 aa12.97□□□□□ -0.33
CDC42SE2-201ENST00000360515 KIF21AQ7Z4S6 1674 aa12.96□□□□□ -0.33
CDC42SE2-201ENST00000360515 WDR62O43379 1518 aa12.96□□□□□ -0.33
CDC42SE2-201ENST00000360515 BAZ1AQ9NRL2 1556 aaPredicted RBP12.91□□□□□ -0.34
CDC42SE2-201ENST00000360515 NESP48681 1621 aa12.83□□□□□ -0.36
CDC42SE2-201ENST00000360515 PRDM2Q13029 1718 aa12.8□□□□□ -0.36
CDC42SE2-201ENST00000360515 MRC2Q9UBG0 1479 aa12.79□□□□□ -0.36
CDC42SE2-201ENST00000360515 BAZ1BQ9UIG0 1483 aaKnown RBP12.79□□□□□ -0.36
CDC42SE2-201ENST00000360515 PDS5BQ9NTI5 1447 aa12.79□□□□□ -0.36
CDC42SE2-201ENST00000360515 CADPSQ9ULU8 1353 aa12.66□□□□□ -0.38
CDC42SE2-201ENST00000360515 RIMBP3CA6NJZ7 1639 aa12.63□□□□□ -0.39
CDC42SE2-201ENST00000360515 RIMBP3BA6NNM3 1639 aa12.63□□□□□ -0.39
CDC42SE2-201ENST00000360515 RIMBP3Q9UFD9 1639 aa12.63□□□□□ -0.39
CDC42SE2-201ENST00000360515 MROH2BQ7Z745 1585 aa12.61□□□□□ -0.39
CDC42SE2-201ENST00000360515 CFTRP13569 1480 aa12.59□□□□□ -0.39
CDC42SE2-201ENST00000360515 WDR97A6NE52 1622 aa12.57□□□□□ -0.4
CDC42SE2-201ENST00000360515 CEP164Q9UPV0 1460 aa12.56□□□□□ -0.4
CDC42SE2-201ENST00000360515 URB2Q14146 1524 aaKnown RBP12.49□□□□□ -0.41
CDC42SE2-201ENST00000360515 FANCD2Q9BXW9 1451 aa12.49□□□□□ -0.41
CDC42SE2-201ENST00000360515 ARHGEF11O15085 1522 aa12.46□□□□□ -0.41
CDC42SE2-201ENST00000360515 TOP2AP11388 1531 aaKnown RBP12.45□□□□□ -0.42
CDC42SE2-201ENST00000360515 IFT140Q96RY7 1462 aa12.45□□□□□ -0.42
CDC42SE2-201ENST00000360515 WIZO95785 1651 aa12.44□□□□□ -0.42
CDC42SE2-201ENST00000360515 RSF1Q96T23 1441 aaPredicted RBP12.43□□□□□ -0.42
CDC42SE2-201ENST00000360515 ABCC8Q09428 1581 aa12.41□□□□□ -0.42
CDC42SE2-201ENST00000360515 TARBP1Q13395 1621 aaKnown RBP12.41□□□□□ -0.42
CDC42SE2-201ENST00000360515 OSCARQ8IYS5 282 aa12.41□□□□□ -0.42
CDC42SE2-201ENST00000360515 CHD1O14646 1710 aa12.38□□□□□ -0.43
CDC42SE2-201ENST00000360515 EIF4G3O43432 1585 aaKnown RBP12.38□□□□□ -0.43
CDC42SE2-201ENST00000360515 CLASP1Q7Z460 1538 aa12.38□□□□□ -0.43
CDC42SE2-201ENST00000360515 DNMBPQ6XZF7 1577 aa12.34□□□□□ -0.43
CDC42SE2-201ENST00000360515 ARAP1Q96P48 1450 aa12.31□□□□□ -0.44
CDC42SE2-201ENST00000360515 TRIM41Q8WV44 630 aa12.31□□□□□ -0.44
CDC42SE2-201ENST00000360515 TOPBP1Q92547 1522 aa12.28□□□□□ -0.44
CDC42SE2-201ENST00000360515 ZNF608Q9ULD9 1512 aaPredicted RBP12.23□□□□□ -0.45
CDC42SE2-201ENST00000360515 SYNJ1O43426 1573 aa12.17□□□□□ -0.46
CDC42SE2-201ENST00000360515 MAGI1Q96QZ7 1491 aaPredicted RBP12.16□□□□□ -0.46
CDC42SE2-201ENST00000360515 SHROOM2Q13796 1616 aa12.15□□□□□ -0.46
CDC42SE2-201ENST00000360515 PBRM1Q86U86 1689 aa12.11□□□□□ -0.47
CDC42SE2-201ENST00000360515 CCDC88BA6NC98 1476 aa12.09□□□□□ -0.47
CDC42SE2-201ENST00000360515 POLA1P09884 1462 aaPredicted RBP12.09□□□□□ -0.47
CDC42SE2-201ENST00000360515 KIF13AQ9H1H9 1805 aa12.08□□□□□ -0.47
CDC42SE2-201ENST00000360515 ABCA5Q8WWZ7 1642 aa12.08□□□□□ -0.48
CDC42SE2-201ENST00000360515 SYNJ2O15056 1496 aa12.04□□□□□ -0.48
CDC42SE2-201ENST00000360515 GRIN2BQ13224 1484 aa12□□□□□ -0.49
CDC42SE2-201ENST00000360515 SNAPC4Q5SXM2 1469 aa11.98□□□□□ -0.49
CDC42SE2-201ENST00000360515 AQRO60306 1485 aaKnown RBP eCLIP11.97□□□□□ -0.491e-6■■□□□ 11.4
CDC42SE2-201ENST00000360515 ABCA10Q8WWZ4 1543 aa11.95□□□□□ -0.5
CDC42SE2-201ENST00000360515 NUP160Q12769 1436 aa11.95□□□□□ -0.5
CDC42SE2-201ENST00000360515 MAPKBP1O60336 1514 aa11.95□□□□□ -0.5
CDC42SE2-201ENST00000360515 ADAMTS12P58397 1594 aa11.94□□□□□ -0.5
CDC42SE2-201ENST00000360515 GAPVD1Q14C86 1478 aa11.93□□□□□ -0.5
CDC42SE2-201ENST00000360515 CUX1P39880 1505 aa11.92□□□□□ -0.5
CDC42SE2-201ENST00000360515 BIVM-ERCC5R4GMW8 1640 aa11.9□□□□□ -0.5
CDC42SE2-201ENST00000360515 FGD5Q6ZNL6 1462 aa11.9□□□□□ -0.5
CDC42SE2-201ENST00000360515 CEP170Q5SW79 1584 aa11.9□□□□□ -0.5
CDC42SE2-201ENST00000360515 SOGA1O94964 1423 aa11.88□□□□□ -0.51
CDC42SE2-201ENST00000360515 CYB5RLQ6IPT4 315 aa11.86□□□□□ -0.51
CDC42SE2-201ENST00000360515 RAD54L2Q9Y4B4 1467 aa11.85□□□□□ -0.51
CDC42SE2-201ENST00000360515 ERICH3Q5RHP9 1530 aa11.85□□□□□ -0.51
CDC42SE2-201ENST00000360515 DIP2BQ9P265 1576 aa11.85□□□□□ -0.51
CDC42SE2-201ENST00000360515 GRIN2AQ12879 1464 aa11.84□□□□□ -0.51
CDC42SE2-201ENST00000360515 GLI2P10070 1586 aa11.81□□□□□ -0.52
CDC42SE2-201ENST00000360515 ERCC6L2Q5T890 1561 aa11.81□□□□□ -0.52
CDC42SE2-201ENST00000360515 ABCC10Q5T3U5 1492 aa11.81□□□□□ -0.52
CDC42SE2-201ENST00000360515 RUSC2Q8N2Y8 1516 aa11.79□□□□□ -0.52
CDC42SE2-201ENST00000360515 PPRC1Q5VV67 1664 aaKnown RBP11.78□□□□□ -0.52
CDC42SE2-201ENST00000360515 TOP2BQ02880 1626 aa11.77□□□□□ -0.52
CDC42SE2-201ENST00000360515 ADCY10Q96PN6 1610 aa11.74□□□□□ -0.53
CDC42SE2-201ENST00000360515 FHAD1B1AJZ9 1412 aa11.74□□□□□ -0.53
CDC42SE2-201ENST00000360515 TDRD9Q8NDG6 1382 aaKnown RBP11.72□□□□□ -0.53
CDC42SE2-201ENST00000360515 AEBP2Q6ZN18 517 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms