RNA–Protein interactions for RNA: ENST00000556133.1

TTC8-212, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 3

Gene TTC8, Length 607 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-212ENST00000556133 AEBP2Q6ZN18 517 aaPredicted RBP24.96■■□□□ 1.59
TTC8-212ENST00000556133 CHIC1Q5VXU3 224 aa23.79■■□□□ 1.4
TTC8-212ENST00000556133 SENP3Q9H4L4 574 aaPredicted RBP21.26■□□□□ 0.99
TTC8-212ENST00000556133 PHF23Q9BUL5 403 aaPredicted RBP21.01■□□□□ 0.95
TTC8-212ENST00000556133 FOXD1Q16676 465 aa19.81■□□□□ 0.76
TTC8-212ENST00000556133 PLPPR3Q6T4P5 718 aa19.05■□□□□ 0.64
TTC8-212ENST00000556133 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
TTC8-212ENST00000556133 ADRA2BP18089 450 aa18.56■□□□□ 0.56
TTC8-212ENST00000556133 PIAS4Q8N2W9 510 aaPredicted RBP18.54■□□□□ 0.56
TTC8-212ENST00000556133 MSH5O43196 834 aa18.48■□□□□ 0.55
TTC8-212ENST00000556133 POTEDQ86YR6 584 aa17.89■□□□□ 0.45
TTC8-212ENST00000556133 MAPK8IP2Q13387 824 aaPredicted RBP17.02■□□□□ 0.32
TTC8-212ENST00000556133 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.3
TTC8-212ENST00000556133 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
TTC8-212ENST00000556133 PPP4R3CPQ6ZMV5 832 aa16.72■□□□□ 0.27
TTC8-212ENST00000556133 CNKSR2Q8WXI2 1034 aa16.38■□□□□ 0.21
TTC8-212ENST00000556133 HOXD11P31277 338 aaPredicted RBP16.29■□□□□ 0.2
TTC8-212ENST00000556133 DCAF8L1A6NGE4 600 aa16.21■□□□□ 0.19
TTC8-212ENST00000556133 RNF216Q9NWF9 866 aaPredicted RBP16.2■□□□□ 0.18
TTC8-212ENST00000556133 NCBP3Q53F19 620 aaKnown RBP16.1■□□□□ 0.17
TTC8-212ENST00000556133 NPM3O75607 178 aaKnown RBP15.87■□□□□ 0.13
TTC8-212ENST00000556133 CACNB1Q02641 598 aaPredicted RBP15.82■□□□□ 0.12
TTC8-212ENST00000556133 RNF39Q9H2S5 420 aa15.79■□□□□ 0.12
TTC8-212ENST00000556133 DNAJC5BQ9UF47 199 aa15.69■□□□□ 0.1
TTC8-212ENST00000556133 KCNA4P22459 653 aa15.67■□□□□ 0.1
TTC8-212ENST00000556133 C1QBPQ07021 282 aaKnown RBP15.55■□□□□ 0.08
TTC8-212ENST00000556133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.54■□□□□ 0.08
TTC8-212ENST00000556133 U3KPZ7 1027 aaPredicted RBP15.22■□□□□ 0.03
TTC8-212ENST00000556133 SLC4A2P04920 1241 aa15.14■□□□□ 0.01
TTC8-212ENST00000556133 SPINK5Q9NQ38 1064 aaPredicted RBP14.98□□□□□ -0.01
TTC8-212ENST00000556133 CAPN15O75808 1086 aa14.95□□□□□ -0.02
TTC8-212ENST00000556133 DSG3P32926 999 aa14.82□□□□□ -0.04
TTC8-212ENST00000556133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.81□□□□□ -0.04
TTC8-212ENST00000556133 HNRNPUL2Q1KMD3 747 aaKnown RBP14.81□□□□□ -0.04
TTC8-212ENST00000556133 SLC4A1APQ9BWU0 796 aaKnown RBP14.81□□□□□ -0.04
TTC8-212ENST00000556133 APLP2Q06481 763 aa14.79□□□□□ -0.04
TTC8-212ENST00000556133 TRHP20396 242 aaPredicted RBP14.74□□□□□ -0.05
TTC8-212ENST00000556133 SAMD1Q6SPF0 538 aaPredicted RBP14.74□□□□□ -0.05
TTC8-212ENST00000556133 ZNF219Q9P2Y4 722 aaPredicted RBP14.7□□□□□ -0.06
TTC8-212ENST00000556133 MYCNP04198 464 aaPredicted RBP14.68□□□□□ -0.06
TTC8-212ENST00000556133 ABCB7O75027 752 aa14.63□□□□□ -0.07
TTC8-212ENST00000556133 FOXD4L1Q9NU39 408 aa14.59□□□□□ -0.07
TTC8-212ENST00000556133 ZBTB22O15209 634 aa14.41□□□□□ -0.1
TTC8-212ENST00000556133 POLA2Q14181 598 aa14.35□□□□□ -0.11
TTC8-212ENST00000556133 ATF5Q9Y2D1 282 aaPredicted RBP14.35□□□□□ -0.11
TTC8-212ENST00000556133 RBM42Q9BTD8 480 aaKnown RBP14.14□□□□□ -0.15
TTC8-212ENST00000556133 ATXN8OSP0DMR3 200 aa14.11□□□□□ -0.15
TTC8-212ENST00000556133 ZBTB12Q9Y330 459 aaPredicted RBP14.05□□□□□ -0.16
TTC8-212ENST00000556133 POTEHQ6S545 545 aa14.03□□□□□ -0.16
TTC8-212ENST00000556133 OSCARQ8IYS5 282 aa13.91□□□□□ -0.18
TTC8-212ENST00000556133 AKT1S1Q96B36 256 aa13.84□□□□□ -0.19
TTC8-212ENST00000556133 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.2
TTC8-212ENST00000556133 CHRDL2Q6WN34 429 aa13.79□□□□□ -0.2
TTC8-212ENST00000556133 FBLN2P98095 1184 aa13.77□□□□□ -0.21
TTC8-212ENST00000556133 EHMT2Q96KQ7 1210 aa13.73□□□□□ -0.21
TTC8-212ENST00000556133 REM2Q8IYK8 340 aaPredicted RBP13.71□□□□□ -0.21
TTC8-212ENST00000556133 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
TTC8-212ENST00000556133 SPDYE2BA6NHP3 402 aa13.64□□□□□ -0.23
TTC8-212ENST00000556133 SPDYE6P0CI01 402 aa13.64□□□□□ -0.23
TTC8-212ENST00000556133 SPDYE2Q495Y8 402 aa13.64□□□□□ -0.23
TTC8-212ENST00000556133 PITPNM1O00562 1244 aa13.57□□□□□ -0.24
TTC8-212ENST00000556133 PIP4P2Q8N4L2 257 aa13.5□□□□□ -0.25
TTC8-212ENST00000556133 ZNF692Q9BU19 519 aaPredicted RBP13.5□□□□□ -0.25
TTC8-212ENST00000556133 SSUH2Q9Y2M2 353 aa13.47□□□□□ -0.25
TTC8-212ENST00000556133 FXR2P51116 673 aaKnown RBP eCLIP13.43□□□□□ -0.26
TTC8-212ENST00000556133 SPDYE1Q8NFV5 336 aaPredicted RBP13.38□□□□□ -0.27
TTC8-212ENST00000556133 CLEC11AQ9Y240 323 aa13.37□□□□□ -0.27
TTC8-212ENST00000556133 PABPN1Q86U42 306 aaKnown RBP eCLIP13.31□□□□□ -0.28
TTC8-212ENST00000556133 HAX1O00165 279 aa13.23□□□□□ -0.29
TTC8-212ENST00000556133 PRKAR2AP13861 404 aaKnown RBP13.22□□□□□ -0.29
TTC8-212ENST00000556133 SP7Q8TDD2 431 aaPredicted RBP13.21□□□□□ -0.29
TTC8-212ENST00000556133 PRR29P0C7W0 189 aa13.16□□□□□ -0.3
TTC8-212ENST00000556133 CHADLQ6NUI6 762 aa13.11□□□□□ -0.31
TTC8-212ENST00000556133 SPDYE4A6NLX3 237 aa13.09□□□□□ -0.31
TTC8-212ENST00000556133 EVX2Q03828 476 aa13.07□□□□□ -0.32
TTC8-212ENST00000556133 C19orf67A6NJJ6 358 aa12.99□□□□□ -0.33
TTC8-212ENST00000556133 STAG3Q9UJ98 1225 aa12.95□□□□□ -0.34
TTC8-212ENST00000556133 FARP1Q9Y4F1 1045 aaPredicted RBP12.91□□□□□ -0.34
TTC8-212ENST00000556133 CREBZFQ9NS37 354 aa12.85□□□□□ -0.35
TTC8-212ENST00000556133 CD44P16070 742 aaKnown RBP12.81□□□□□ -0.36
TTC8-212ENST00000556133 GABBR2O75899 941 aa12.78□□□□□ -0.36
TTC8-212ENST00000556133 PROM2Q8N271 834 aa12.77□□□□□ -0.37
TTC8-212ENST00000556133 ZRANB1Q9UGI0 708 aa12.65□□□□□ -0.38
TTC8-212ENST00000556133 MNX1P50219 401 aaPredicted RBP12.63□□□□□ -0.39
TTC8-212ENST00000556133 NPM1P06748 294 aaKnown RBP eCLIP12.61□□□□□ -0.39
TTC8-212ENST00000556133 ZNF579Q8NAF0 562 aaKnown RBP12.61□□□□□ -0.39
TTC8-212ENST00000556133 CLCN6P51797 869 aa12.58□□□□□ -0.4
TTC8-212ENST00000556133 PAK3O75914 559 aaPredicted RBP12.56□□□□□ -0.4
TTC8-212ENST00000556133 FKBP8Q14318 412 aa12.56□□□□□ -0.4
TTC8-212ENST00000556133 POTEIP0CG38 1075 aa12.51□□□□□ -0.41
TTC8-212ENST00000556133 PHF12Q96QT6 1004 aa12.49□□□□□ -0.41
TTC8-212ENST00000556133 MIER1Q8N108 512 aa12.48□□□□□ -0.41
TTC8-212ENST00000556133 GALR2O43603 387 aaPredicted RBP12.46□□□□□ -0.41
TTC8-212ENST00000556133 DCBLD2Q96PD2 775 aa12.46□□□□□ -0.41
TTC8-212ENST00000556133 PLEKHG5O94827 1062 aa12.45□□□□□ -0.42
TTC8-212ENST00000556133 PLCD3Q8N3E9 789 aa12.41□□□□□ -0.42
TTC8-212ENST00000556133 TSPYL2Q9H2G4 693 aaPredicted RBP12.41□□□□□ -0.42
TTC8-212ENST00000556133 LHX8Q68G74 356 aa12.39□□□□□ -0.43
TTC8-212ENST00000556133 CCDC61Q9Y6R9 512 aa12.33□□□□□ -0.44
TTC8-212ENST00000556133 MS4A3Q96HJ5 214 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms