RNA–Protein interactions for RNA: ENST00000504644.1

RAB28-204, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5

Gene RAB28, Length 405 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-204ENST00000504644 AEBP2Q6ZN18 517 aaPredicted RBP16.44■□□□□ 0.22
RAB28-204ENST00000504644 CHIC1Q5VXU3 224 aa15.18■□□□□ 0.02
RAB28-204ENST00000504644 SLC24A1O60721 1099 aa14.12□□□□□ -0.15
RAB28-204ENST00000504644 SENP3Q9H4L4 574 aaPredicted RBP13.96□□□□□ -0.17
RAB28-204ENST00000504644 PHF23Q9BUL5 403 aaPredicted RBP13.74□□□□□ -0.21
RAB28-204ENST00000504644 FOXD1Q16676 465 aa13.13□□□□□ -0.31
RAB28-204ENST00000504644 DAXXQ9UER7 740 aaPredicted RBP13.01□□□□□ -0.33
RAB28-204ENST00000504644 TTBK1Q5TCY1 1321 aaPredicted RBP13□□□□□ -0.33
RAB28-204ENST00000504644 MYT1Q01538 1121 aa12.97□□□□□ -0.33
RAB28-204ENST00000504644 POTEDQ86YR6 584 aa12.86□□□□□ -0.35
RAB28-204ENST00000504644 EHMT2Q96KQ7 1210 aa12.78□□□□□ -0.36
RAB28-204ENST00000504644 NCBP3Q53F19 620 aaKnown RBP12.7□□□□□ -0.38
RAB28-204ENST00000504644 PELP1Q8IZL8 1130 aaKnown RBP12.69□□□□□ -0.38
RAB28-204ENST00000504644 AMER1Q5JTC6 1135 aaPredicted RBP12.55□□□□□ -0.4
RAB28-204ENST00000504644 RTN4Q9NQC3 1192 aaKnown RBP12.47□□□□□ -0.41
RAB28-204ENST00000504644 ERICH6Q7L0X2 663 aa12.46□□□□□ -0.41
RAB28-204ENST00000504644 APLP2Q06481 763 aa12.41□□□□□ -0.42
RAB28-204ENST00000504644 MSH5O43196 834 aa12.36□□□□□ -0.43
RAB28-204ENST00000504644 PLPPR3Q6T4P5 718 aa12.34□□□□□ -0.43
RAB28-204ENST00000504644 ARXQ96QS3 562 aa12.33□□□□□ -0.44
RAB28-204ENST00000504644 PIAS4Q8N2W9 510 aaPredicted RBP12.09□□□□□ -0.47
RAB28-204ENST00000504644 PRKCSHP14314 528 aaPredicted RBP12.08□□□□□ -0.48
RAB28-204ENST00000504644 RANGAP1P46060 587 aaPredicted RBP12.06□□□□□ -0.48
RAB28-204ENST00000504644 PPP6R1Q9UPN7 881 aa11.99□□□□□ -0.49
RAB28-204ENST00000504644 KCNA4P22459 653 aa11.97□□□□□ -0.49
RAB28-204ENST00000504644 CSRNP3Q8WYN3 585 aa11.94□□□□□ -0.5
RAB28-204ENST00000504644 HOMEZQ8IX15 550 aa11.89□□□□□ -0.51
RAB28-204ENST00000504644 ADRA2BP18089 450 aa11.86□□□□□ -0.51
RAB28-204ENST00000504644 TIMELESSQ9UNS1 1208 aa11.8□□□□□ -0.52
RAB28-204ENST00000504644 BCANQ96GW7 911 aa11.76□□□□□ -0.53
RAB28-204ENST00000504644 TAOK2Q9UL54 1235 aa11.76□□□□□ -0.53
RAB28-204ENST00000504644 TULP1O00294 542 aaPredicted RBP11.66□□□□□ -0.54
RAB28-204ENST00000504644 EIF5BO60841 1220 aaKnown RBP11.6□□□□□ -0.55
RAB28-204ENST00000504644 TPRNQ4KMQ1 711 aa11.48□□□□□ -0.57
RAB28-204ENST00000504644 PODXL2Q9NZ53 605 aa11.45□□□□□ -0.58
RAB28-204ENST00000504644 GTF3C3Q9Y5Q9 886 aa11.45□□□□□ -0.58
RAB28-204ENST00000504644 PLCB2Q00722 1185 aa11.41□□□□□ -0.58
RAB28-204ENST00000504644 SLC4A1APQ9BWU0 796 aaKnown RBP11.4□□□□□ -0.58
RAB28-204ENST00000504644 FBXO3Q9UK99 471 aa11.37□□□□□ -0.59
RAB28-204ENST00000504644 KLHL34Q8N239 644 aa11.36□□□□□ -0.59
RAB28-204ENST00000504644 NPM2Q86SE8 214 aaKnown RBP11.29□□□□□ -0.6
RAB28-204ENST00000504644 HAP1P54257 671 aaPredicted RBP11.23□□□□□ -0.61
RAB28-204ENST00000504644 VSIG10Q8N0Z9 540 aa11.18□□□□□ -0.62
RAB28-204ENST00000504644 DCAF8L2P0C7V8 631 aa11.17□□□□□ -0.62
RAB28-204ENST00000504644 TMEM132AQ24JP5 1023 aa11.16□□□□□ -0.62
RAB28-204ENST00000504644 C14orf37Q86TY3 774 aa11.1□□□□□ -0.63
RAB28-204ENST00000504644 DMRT2Q9Y5R5 561 aa11.05□□□□□ -0.64
RAB28-204ENST00000504644 MAPK8IP2Q13387 824 aaPredicted RBP11.04□□□□□ -0.64
RAB28-204ENST00000504644 CDK11AQ9UQ88 783 aaPredicted RBP10.87□□□□□ -0.67
RAB28-204ENST00000504644 TRIM26Q12899 539 aaPredicted RBP10.86□□□□□ -0.67
RAB28-204ENST00000504644 HMGB1P09429 215 aaKnown RBP10.84□□□□□ -0.67
RAB28-204ENST00000504644 PLEKHG5O94827 1062 aa10.82□□□□□ -0.68
RAB28-204ENST00000504644 CACNB1Q02641 598 aaPredicted RBP10.82□□□□□ -0.68
RAB28-204ENST00000504644 BCL11AQ9H165 835 aa10.82□□□□□ -0.68
RAB28-204ENST00000504644 SCAF1Q9H7N4 1312 aaKnown RBP10.75□□□□□ -0.69
RAB28-204ENST00000504644 PDIA4P13667 645 aaKnown RBP10.73□□□□□ -0.69
RAB28-204ENST00000504644 SUPT5HO00267 1087 aaKnown RBP10.71□□□□□ -0.69
RAB28-204ENST00000504644 CDK11BP21127 795 aaKnown RBP10.71□□□□□ -0.69
RAB28-204ENST00000504644 FKBP8Q14318 412 aa10.71□□□□□ -0.69
RAB28-204ENST00000504644 KDM2AQ9Y2K7 1162 aa10.71□□□□□ -0.69
RAB28-204ENST00000504644 SHROOM4Q9ULL8 1493 aa10.69□□□□□ -0.7
RAB28-204ENST00000504644 ZBTB22O15209 634 aa10.69□□□□□ -0.7
RAB28-204ENST00000504644 HRCP23327 699 aa10.68□□□□□ -0.7
RAB28-204ENST00000504644 LOC105371045A0A1W2PR82 267 aa10.67□□□□□ -0.7
RAB28-204ENST00000504644 UBE2Q2Q8WVN8 375 aa10.66□□□□□ -0.7
RAB28-204ENST00000504644 CNKSR2Q8WXI2 1034 aa10.66□□□□□ -0.7
RAB28-204ENST00000504644 UBTFP17480 764 aaKnown RBP10.64□□□□□ -0.71
RAB28-204ENST00000504644 HSP90B1P14625 803 aaKnown RBP10.61□□□□□ -0.71
RAB28-204ENST00000504644 BRD2P25440 801 aaKnown RBP10.59□□□□□ -0.71
RAB28-204ENST00000504644 RNF39Q9H2S5 420 aa10.59□□□□□ -0.71
RAB28-204ENST00000504644 CCDC9Q9Y3X0 531 aaKnown RBP10.59□□□□□ -0.71
RAB28-204ENST00000504644 NEFLP07196 543 aa10.54□□□□□ -0.72
RAB28-204ENST00000504644 NBR1Q14596 966 aa10.54□□□□□ -0.72
RAB28-204ENST00000504644 CHMP4AQ9BY43 222 aa10.54□□□□□ -0.72
RAB28-204ENST00000504644 FBLN2P98095 1184 aa10.53□□□□□ -0.72
RAB28-204ENST00000504644 TAF7LQ5H9L4 462 aa10.52□□□□□ -0.73
RAB28-204ENST00000504644 HOXD11P31277 338 aaPredicted RBP10.51□□□□□ -0.73
RAB28-204ENST00000504644 PPP4R3CPQ6ZMV5 832 aa10.49□□□□□ -0.73
RAB28-204ENST00000504644 PDE4CQ08493 712 aa10.47□□□□□ -0.73
RAB28-204ENST00000504644 SAMD1Q6SPF0 538 aaPredicted RBP10.46□□□□□ -0.73
RAB28-204ENST00000504644 DCAF8L1A6NGE4 600 aa10.44□□□□□ -0.74
RAB28-204ENST00000504644 PUS7Q96PZ0 661 aaKnown RBP10.44□□□□□ -0.74
RAB28-204ENST00000504644 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.44□□□□□ -0.74
RAB28-204ENST00000504644 FAM9AQ8IZU1 332 aaPredicted RBP10.43□□□□□ -0.74
RAB28-204ENST00000504644 ZBTB7CA1YPR0 619 aa10.41□□□□□ -0.74
RAB28-204ENST00000504644 NPM3O75607 178 aaKnown RBP10.37□□□□□ -0.75
RAB28-204ENST00000504644 C1QBPQ07021 282 aaKnown RBP10.35□□□□□ -0.75
RAB28-204ENST00000504644 IGSF3O75054 1194 aa10.32□□□□□ -0.76
RAB28-204ENST00000504644 BBXQ8WY36 941 aaPredicted RBP10.32□□□□□ -0.76
RAB28-204ENST00000504644 FOXD4L1Q9NU39 408 aa10.32□□□□□ -0.76
RAB28-204ENST00000504644 BCCIPQ9P287 314 aaKnown RBP eCLIP10.31□□□□□ -0.76
RAB28-204ENST00000504644 ZNF326Q5BKZ1 582 aaKnown RBP10.3□□□□□ -0.76
RAB28-204ENST00000504644 PAXIP1Q6ZW49 1069 aaPredicted RBP10.28□□□□□ -0.76
RAB28-204ENST00000504644 PKNOX2Q96KN3 472 aa10.26□□□□□ -0.77
RAB28-204ENST00000504644 RNF216Q9NWF9 866 aaPredicted RBP10.26□□□□□ -0.77
RAB28-204ENST00000504644 DHX37Q8IY37 1157 aaKnown RBP10.24□□□□□ -0.77
RAB28-204ENST00000504644 CFAP44Q96MT7 982 aa10.23□□□□□ -0.77
RAB28-204ENST00000504644 DNAJC5BQ9UF47 199 aa10.23□□□□□ -0.77
RAB28-204ENST00000504644 POLR3GLQ9BT43 218 aa10.2□□□□□ -0.78
RAB28-204ENST00000504644 ARID3AQ99856 593 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms