RNA–Protein interactions for RNA: ENST00000554686.5

TTC8-209, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 5

Gene TTC8, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-209ENST00000554686 NISCHQ9Y2I1 1504 aa16.53■□□□□ 0.24
TTC8-209ENST00000554686 CCDC180Q9P1Z9 1646 aa14.69□□□□□ -0.06
TTC8-209ENST00000554686 ABCC9O60706 1549 aa14.43□□□□□ -0.1
TTC8-209ENST00000554686 RB1CC1Q8TDY2 1594 aa13.84□□□□□ -0.19
TTC8-209ENST00000554686 NACADO15069 1562 aa13.83□□□□□ -0.2
TTC8-209ENST00000554686 DCAF8L2P0C7V8 631 aa13.82□□□□□ -0.2
TTC8-209ENST00000554686 ZCCHC6Q5VYS8 1495 aaKnown RBP13.77□□□□□ -0.21
TTC8-209ENST00000554686 MYO15BQ96JP2 1530 aa13.75□□□□□ -0.21
TTC8-209ENST00000554686 DCAF1Q9Y4B6 1507 aa13.67□□□□□ -0.22
TTC8-209ENST00000554686 AEBP2Q6ZN18 517 aaPredicted RBP13.59□□□□□ -0.23
TTC8-209ENST00000554686 UNC13AQ9UPW8 1703 aa13.56□□□□□ -0.24
TTC8-209ENST00000554686 PABPN1Q86U42 306 aaKnown RBP eCLIP13.48□□□□□ -0.25
TTC8-209ENST00000554686 BICRAQ9NZM4 1560 aa13.46□□□□□ -0.25
TTC8-209ENST00000554686 SCRIBQ14160 1630 aa13.41□□□□□ -0.26
TTC8-209ENST00000554686 DNAJC5BQ9UF47 199 aa13.31□□□□□ -0.28
TTC8-209ENST00000554686 SHROOM4Q9ULL8 1493 aa13.28□□□□□ -0.28
TTC8-209ENST00000554686 EIF4G1Q04637 1599 aaKnown RBP13.1□□□□□ -0.31
TTC8-209ENST00000554686 CC2D2AQ9P2K1 1620 aa13.05□□□□□ -0.32
TTC8-209ENST00000554686 CECR2Q9BXF3 1484 aa12.97□□□□□ -0.33
TTC8-209ENST00000554686 CHIC1Q5VXU3 224 aa12.86□□□□□ -0.35
TTC8-209ENST00000554686 SMARCA4P51532 1647 aa12.83□□□□□ -0.36
TTC8-209ENST00000554686 BAZ1AQ9NRL2 1556 aaPredicted RBP12.8□□□□□ -0.36
TTC8-209ENST00000554686 NCAPD3P42695 1498 aa12.78□□□□□ -0.36
TTC8-209ENST00000554686 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
TTC8-209ENST00000554686 SMARCA2P51531 1590 aa12.74□□□□□ -0.37
TTC8-209ENST00000554686 MROH2BQ7Z745 1585 aa12.74□□□□□ -0.37
TTC8-209ENST00000554686 PEG3Q9GZU2 1588 aa12.72□□□□□ -0.37
TTC8-209ENST00000554686 HMGXB3Q12766 1538 aa12.7□□□□□ -0.38
TTC8-209ENST00000554686 BAZ1BQ9UIG0 1483 aaKnown RBP12.66□□□□□ -0.38
TTC8-209ENST00000554686 RSF1Q96T23 1441 aaPredicted RBP12.59□□□□□ -0.39
TTC8-209ENST00000554686 WIZO95785 1651 aa12.59□□□□□ -0.39
TTC8-209ENST00000554686 SLC24A1O60721 1099 aa12.59□□□□□ -0.39
TTC8-209ENST00000554686 NESP48681 1621 aa12.48□□□□□ -0.41
TTC8-209ENST00000554686 TOP2AP11388 1531 aaKnown RBP12.45□□□□□ -0.42
TTC8-209ENST00000554686 LAMC3Q9Y6N6 1575 aa12.42□□□□□ -0.42
TTC8-209ENST00000554686 ERCC6Q03468 1493 aa12.42□□□□□ -0.42
TTC8-209ENST00000554686 CADPSQ9ULU8 1353 aa12.4□□□□□ -0.42
TTC8-209ENST00000554686 PDS5BQ9NTI5 1447 aa12.34□□□□□ -0.43
TTC8-209ENST00000554686 CFTRP13569 1480 aa12.33□□□□□ -0.44
TTC8-209ENST00000554686 KIF21AQ7Z4S6 1674 aa12.32□□□□□ -0.44
TTC8-209ENST00000554686 CCDC88BA6NC98 1476 aa12.32□□□□□ -0.44
TTC8-209ENST00000554686 CUX2O14529 1486 aa12.3□□□□□ -0.44
TTC8-209ENST00000554686 THOC2Q8NI27 1593 aaKnown RBP12.29□□□□□ -0.44
TTC8-209ENST00000554686 FANCD2Q9BXW9 1451 aa12.26□□□□□ -0.45
TTC8-209ENST00000554686 CEP164Q9UPV0 1460 aa12.23□□□□□ -0.45
TTC8-209ENST00000554686 SUPT5HO00267 1087 aaKnown RBP12.23□□□□□ -0.45
TTC8-209ENST00000554686 MRC2Q9UBG0 1479 aa12.22□□□□□ -0.45
TTC8-209ENST00000554686 PRDM2Q13029 1718 aa12.2□□□□□ -0.46
TTC8-209ENST00000554686 WDR62O43379 1518 aa12.19□□□□□ -0.46
TTC8-209ENST00000554686 URB2Q14146 1524 aaKnown RBP12.14□□□□□ -0.47
TTC8-209ENST00000554686 TOPBP1Q92547 1522 aa12.05□□□□□ -0.48
TTC8-209ENST00000554686 ABCC8Q09428 1581 aa12.03□□□□□ -0.48
TTC8-209ENST00000554686 DNMBPQ6XZF7 1577 aa12.02□□□□□ -0.48
TTC8-209ENST00000554686 POTEDQ86YR6 584 aa12.02□□□□□ -0.48
TTC8-209ENST00000554686 DNAJC5Q9H3Z4 198 aa12□□□□□ -0.49
TTC8-209ENST00000554686 IFT140Q96RY7 1462 aa11.97□□□□□ -0.49
TTC8-209ENST00000554686 CUX1P39880 1505 aa11.96□□□□□ -0.5
TTC8-209ENST00000554686 POLA1P09884 1462 aaPredicted RBP11.96□□□□□ -0.5
TTC8-209ENST00000554686 ZNF608Q9ULD9 1512 aaPredicted RBP11.95□□□□□ -0.5
TTC8-209ENST00000554686 TARBP1Q13395 1621 aaKnown RBP11.93□□□□□ -0.5
TTC8-209ENST00000554686 FGD5Q6ZNL6 1462 aa11.91□□□□□ -0.5
TTC8-209ENST00000554686 RAD54L2Q9Y4B4 1467 aa11.9□□□□□ -0.5
TTC8-209ENST00000554686 SOGA1O94964 1423 aa11.89□□□□□ -0.51
TTC8-209ENST00000554686 EIF4G3O43432 1585 aaKnown RBP11.88□□□□□ -0.51
TTC8-209ENST00000554686 AQRO60306 1485 aaKnown RBP eCLIP11.87□□□□□ -0.51
TTC8-209ENST00000554686 WRNQ14191 1432 aaPredicted RBP eCLIP11.86□□□□□ -0.51
TTC8-209ENST00000554686 TDRD9Q8NDG6 1382 aaKnown RBP11.85□□□□□ -0.51
TTC8-209ENST00000554686 SYNJ1O43426 1573 aa11.84□□□□□ -0.51
TTC8-209ENST00000554686 TOP2BQ02880 1626 aa11.83□□□□□ -0.52
TTC8-209ENST00000554686 BIVM-ERCC5R4GMW8 1640 aa11.82□□□□□ -0.52
TTC8-209ENST00000554686 WDR97A6NE52 1622 aa11.81□□□□□ -0.52
TTC8-209ENST00000554686 OSCARQ8IYS5 282 aa11.8□□□□□ -0.52
TTC8-209ENST00000554686 ABCA10Q8WWZ4 1543 aa11.8□□□□□ -0.52
TTC8-209ENST00000554686 GAPVD1Q14C86 1478 aa11.76□□□□□ -0.53
TTC8-209ENST00000554686 GRIN2BQ13224 1484 aa11.76□□□□□ -0.53
TTC8-209ENST00000554686 ABCA5Q8WWZ7 1642 aa11.75□□□□□ -0.53
TTC8-209ENST00000554686 SNAPC4Q5SXM2 1469 aa11.74□□□□□ -0.53
TTC8-209ENST00000554686 CHD1O14646 1710 aa11.74□□□□□ -0.53
TTC8-209ENST00000554686 MAGI1Q96QZ7 1491 aaPredicted RBP11.73□□□□□ -0.53
TTC8-209ENST00000554686 PBRM1Q86U86 1689 aa11.72□□□□□ -0.53
TTC8-209ENST00000554686 FBLN2P98095 1184 aa11.72□□□□□ -0.53
TTC8-209ENST00000554686 MYT1Q01538 1121 aa11.71□□□□□ -0.53
TTC8-209ENST00000554686 SYNJ2O15056 1496 aa11.69□□□□□ -0.54
TTC8-209ENST00000554686 CHMP7Q8WUX9 453 aaPredicted RBP11.68□□□□□ -0.54
TTC8-209ENST00000554686 ERICH3Q5RHP9 1530 aa11.65□□□□□ -0.54
TTC8-209ENST00000554686 SENP3Q9H4L4 574 aaPredicted RBP11.64□□□□□ -0.55
TTC8-209ENST00000554686 ADAMTS12P58397 1594 aa11.64□□□□□ -0.55
TTC8-209ENST00000554686 ARHGEF11O15085 1522 aa11.62□□□□□ -0.55
TTC8-209ENST00000554686 CLASP1Q7Z460 1538 aa11.62□□□□□ -0.55
TTC8-209ENST00000554686 GRIN2AQ12879 1464 aa11.61□□□□□ -0.55
TTC8-209ENST00000554686 FHAD1B1AJZ9 1412 aa11.61□□□□□ -0.55
TTC8-209ENST00000554686 RIMBP3CA6NJZ7 1639 aa11.61□□□□□ -0.55
TTC8-209ENST00000554686 RIMBP3BA6NNM3 1639 aa11.61□□□□□ -0.55
TTC8-209ENST00000554686 RIMBP3Q9UFD9 1639 aa11.61□□□□□ -0.55
TTC8-209ENST00000554686 KIF27Q86VH2 1401 aa11.61□□□□□ -0.55
TTC8-209ENST00000554686 IGF1RP08069 1367 aa11.59□□□□□ -0.55
TTC8-209ENST00000554686 DAXXQ9UER7 740 aaPredicted RBP11.59□□□□□ -0.55
TTC8-209ENST00000554686 TTBK1Q5TCY1 1321 aaPredicted RBP11.58□□□□□ -0.56
TTC8-209ENST00000554686 NUP160Q12769 1436 aa11.57□□□□□ -0.56
TTC8-209ENST00000554686 TRIM41Q8WV44 630 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms