RNA–Protein interactions for RNA: ENST00000491229.1

PSMD1-212, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 2

Gene PSMD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-212ENST00000491229 AEBP2Q6ZN18 517 aaPredicted RBP17.29■□□□□ 0.36
PSMD1-212ENST00000491229 CHIC1Q5VXU3 224 aa16.72■□□□□ 0.27
PSMD1-212ENST00000491229 SENP3Q9H4L4 574 aaPredicted RBP14.94□□□□□ -0.02
PSMD1-212ENST00000491229 PHF23Q9BUL5 403 aaPredicted RBP14.71□□□□□ -0.05
PSMD1-212ENST00000491229 FOXD1Q16676 465 aa13.77□□□□□ -0.21
PSMD1-212ENST00000491229 PLPPR3Q6T4P5 718 aa13.56□□□□□ -0.24
PSMD1-212ENST00000491229 PIAS4Q8N2W9 510 aaPredicted RBP13.05□□□□□ -0.32
PSMD1-212ENST00000491229 ADRA2BP18089 450 aa13.02□□□□□ -0.33
PSMD1-212ENST00000491229 MSH5O43196 834 aa12.97□□□□□ -0.33
PSMD1-212ENST00000491229 PPP6R1Q9UPN7 881 aa12.96□□□□□ -0.33
PSMD1-212ENST00000491229 POTEDQ86YR6 584 aa12.2□□□□□ -0.46
PSMD1-212ENST00000491229 SCAF1Q9H7N4 1312 aaKnown RBP12.13□□□□□ -0.47
PSMD1-212ENST00000491229 MAPK8IP2Q13387 824 aaPredicted RBP11.87□□□□□ -0.51
PSMD1-212ENST00000491229 PPP4R3CPQ6ZMV5 832 aa11.86□□□□□ -0.51
PSMD1-212ENST00000491229 DMRT2Q9Y5R5 561 aa11.8□□□□□ -0.52
PSMD1-212ENST00000491229 NCBP3Q53F19 620 aaKnown RBP11.63□□□□□ -0.55
PSMD1-212ENST00000491229 CNKSR2Q8WXI2 1034 aa11.63□□□□□ -0.55
PSMD1-212ENST00000491229 DCAF8L1A6NGE4 600 aa11.53□□□□□ -0.56
PSMD1-212ENST00000491229 RNF216Q9NWF9 866 aaPredicted RBP11.45□□□□□ -0.58
PSMD1-212ENST00000491229 HOXD11P31277 338 aaPredicted RBP11.4□□□□□ -0.58
PSMD1-212ENST00000491229 NPM3O75607 178 aaKnown RBP11.25□□□□□ -0.61
PSMD1-212ENST00000491229 KCNA4P22459 653 aa11.2□□□□□ -0.62
PSMD1-212ENST00000491229 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.07□□□□□ -0.642e-6■■■■□ 26
PSMD1-212ENST00000491229 NISCHQ9Y2I1 1504 aa11.07□□□□□ -0.64
PSMD1-212ENST00000491229 CACNB1Q02641 598 aaPredicted RBP11.05□□□□□ -0.64
PSMD1-212ENST00000491229 EHMT2Q96KQ7 1210 aa11.04□□□□□ -0.64
PSMD1-212ENST00000491229 DNAJC5BQ9UF47 199 aa10.99□□□□□ -0.65
PSMD1-212ENST00000491229 RNF39Q9H2S5 420 aa10.96□□□□□ -0.65
PSMD1-212ENST00000491229 C1QBPQ07021 282 aaKnown RBP10.91□□□□□ -0.66
PSMD1-212ENST00000491229 SLC4A1APQ9BWU0 796 aaKnown RBP10.79□□□□□ -0.68
PSMD1-212ENST00000491229 APLP2Q06481 763 aa10.68□□□□□ -0.7
PSMD1-212ENST00000491229 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.67□□□□□ -0.7
PSMD1-212ENST00000491229 HNRNPUL2Q1KMD3 747 aaKnown RBP10.67□□□□□ -0.7
PSMD1-212ENST00000491229 U3KPZ7 1027 aaPredicted RBP10.67□□□□□ -0.7
PSMD1-212ENST00000491229 CSRNP3Q8WYN3 585 aa10.65□□□□□ -0.7
PSMD1-212ENST00000491229 CAPN15O75808 1086 aa10.62□□□□□ -0.71
PSMD1-212ENST00000491229 SLC4A2P04920 1241 aa10.62□□□□□ -0.71
PSMD1-212ENST00000491229 SAMD1Q6SPF0 538 aaPredicted RBP10.55□□□□□ -0.72
PSMD1-212ENST00000491229 MYCNP04198 464 aaPredicted RBP10.5□□□□□ -0.73
PSMD1-212ENST00000491229 TRHP20396 242 aaPredicted RBP10.48□□□□□ -0.73
PSMD1-212ENST00000491229 SPINK5Q9NQ38 1064 aaPredicted RBP10.47□□□□□ -0.73
PSMD1-212ENST00000491229 FOXD4L1Q9NU39 408 aa10.47□□□□□ -0.73
PSMD1-212ENST00000491229 ZNF219Q9P2Y4 722 aaPredicted RBP10.46□□□□□ -0.73
PSMD1-212ENST00000491229 DSG3P32926 999 aa10.34□□□□□ -0.75
PSMD1-212ENST00000491229 ABCB7O75027 752 aa10.31□□□□□ -0.76
PSMD1-212ENST00000491229 ZBTB22O15209 634 aa10.25□□□□□ -0.77
PSMD1-212ENST00000491229 POLA2Q14181 598 aa10.19□□□□□ -0.78
PSMD1-212ENST00000491229 ATXN8OSP0DMR3 200 aa10.13□□□□□ -0.79
PSMD1-212ENST00000491229 ZBTB12Q9Y330 459 aaPredicted RBP10.1□□□□□ -0.79
PSMD1-212ENST00000491229 ABCC9O60706 1549 aa10.1□□□□□ -0.79
PSMD1-212ENST00000491229 ATF5Q9Y2D1 282 aaPredicted RBP10.07□□□□□ -0.8
PSMD1-212ENST00000491229 RBM42Q9BTD8 480 aaKnown RBP10.03□□□□□ -0.8
PSMD1-212ENST00000491229 CCDC180Q9P1Z9 1646 aa9.96□□□□□ -0.81
PSMD1-212ENST00000491229 FBLN2P98095 1184 aa9.95□□□□□ -0.82
PSMD1-212ENST00000491229 AMER1Q5JTC6 1135 aaPredicted RBP9.82□□□□□ -0.84
PSMD1-212ENST00000491229 OSCARQ8IYS5 282 aa9.81□□□□□ -0.84
PSMD1-212ENST00000491229 AKT1S1Q96B36 256 aa9.76□□□□□ -0.85
PSMD1-212ENST00000491229 SPDYE2BA6NHP3 402 aa9.71□□□□□ -0.86
PSMD1-212ENST00000491229 SLC24A1O60721 1099 aa9.71□□□□□ -0.86
PSMD1-212ENST00000491229 SPDYE6P0CI01 402 aa9.71□□□□□ -0.86
PSMD1-212ENST00000491229 SPDYE2Q495Y8 402 aa9.71□□□□□ -0.86
PSMD1-212ENST00000491229 RTN4Q9NQC3 1192 aaKnown RBP9.7□□□□□ -0.86
PSMD1-212ENST00000491229 ZNF692Q9BU19 519 aaPredicted RBP9.68□□□□□ -0.86
PSMD1-212ENST00000491229 POTEHQ6S545 545 aa9.66□□□□□ -0.86
PSMD1-212ENST00000491229 CHRDL2Q6WN34 429 aa9.65□□□□□ -0.86
PSMD1-212ENST00000491229 FKBP8Q14318 412 aa9.64□□□□□ -0.87
PSMD1-212ENST00000491229 REM2Q8IYK8 340 aaPredicted RBP9.64□□□□□ -0.87
PSMD1-212ENST00000491229 MKRN4PQ13434 485 aaPredicted RBP9.62□□□□□ -0.87
PSMD1-212ENST00000491229 RB1CC1Q8TDY2 1594 aa9.56□□□□□ -0.88
PSMD1-212ENST00000491229 CLEC11AQ9Y240 323 aa9.56□□□□□ -0.88
PSMD1-212ENST00000491229 SPDYE1Q8NFV5 336 aaPredicted RBP9.54□□□□□ -0.88
PSMD1-212ENST00000491229 PITPNM1O00562 1244 aa9.51□□□□□ -0.89
PSMD1-212ENST00000491229 PABPN1Q86U42 306 aaKnown RBP eCLIP9.5□□□□□ -0.89
PSMD1-212ENST00000491229 SSUH2Q9Y2M2 353 aa9.49□□□□□ -0.89
PSMD1-212ENST00000491229 NACADO15069 1562 aa9.49□□□□□ -0.89
PSMD1-212ENST00000491229 SPDYE4A6NLX3 237 aa9.45□□□□□ -0.9
PSMD1-212ENST00000491229 PRR29P0C7W0 189 aa9.42□□□□□ -0.9
PSMD1-212ENST00000491229 PIP4P2Q8N4L2 257 aa9.41□□□□□ -0.9
PSMD1-212ENST00000491229 STAG3Q9UJ98 1225 aa9.37□□□□□ -0.91
PSMD1-212ENST00000491229 FXR2P51116 673 aaKnown RBP eCLIP9.36□□□□□ -0.91
PSMD1-212ENST00000491229 MYO15BQ96JP2 1530 aa9.36□□□□□ -0.91
PSMD1-212ENST00000491229 DCAF8L2P0C7V8 631 aa9.34□□□□□ -0.91
PSMD1-212ENST00000491229 PRKAR2AP13861 404 aaKnown RBP9.34□□□□□ -0.91
PSMD1-212ENST00000491229 HAX1O00165 279 aa9.33□□□□□ -0.92
PSMD1-212ENST00000491229 BICRAQ9NZM4 1560 aa9.33□□□□□ -0.92
PSMD1-212ENST00000491229 UNC13AQ9UPW8 1703 aa9.31□□□□□ -0.92
PSMD1-212ENST00000491229 FBXO3Q9UK99 471 aa9.25□□□□□ -0.93
PSMD1-212ENST00000491229 CHADLQ6NUI6 762 aa9.23□□□□□ -0.93
PSMD1-212ENST00000491229 PLEKHG5O94827 1062 aa9.2□□□□□ -0.94
PSMD1-212ENST00000491229 SHROOM4Q9ULL8 1493 aa9.19□□□□□ -0.94
PSMD1-212ENST00000491229 DCAF1Q9Y4B6 1507 aa9.16□□□□□ -0.94
PSMD1-212ENST00000491229 SP7Q8TDD2 431 aaPredicted RBP9.15□□□□□ -0.94
PSMD1-212ENST00000491229 CECR2Q9BXF3 1484 aa9.14□□□□□ -0.95
PSMD1-212ENST00000491229 FARP1Q9Y4F1 1045 aaPredicted RBP9.13□□□□□ -0.95
PSMD1-212ENST00000491229 ZCCHC6Q5VYS8 1495 aaKnown RBP9.13□□□□□ -0.95
PSMD1-212ENST00000491229 CC2D2AQ9P2K1 1620 aa9.13□□□□□ -0.95
PSMD1-212ENST00000491229 NPM1P06748 294 aaKnown RBP eCLIP9.11□□□□□ -0.95
PSMD1-212ENST00000491229 PAK3O75914 559 aaPredicted RBP9.1□□□□□ -0.95
PSMD1-212ENST00000491229 MIER1Q8N108 512 aa9.08□□□□□ -0.96
PSMD1-212ENST00000491229 PROM2Q8N271 834 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms