RNA–Protein interactions for RNA: ENST00000486883.5

ITCH-206, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene ITCH, Length 703 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-206ENST00000486883 AEBP2Q6ZN18 517 aaPredicted RBP29.08■■■□□ 2.25
ITCH-206ENST00000486883 CHIC1Q5VXU3 224 aa27.7■■■□□ 2.02
ITCH-206ENST00000486883 SENP3Q9H4L4 574 aaPredicted RBP24.88■■□□□ 1.57
ITCH-206ENST00000486883 PHF23Q9BUL5 403 aaPredicted RBP24.57■■□□□ 1.52
ITCH-206ENST00000486883 FOXD1Q16676 465 aa23.15■■□□□ 1.3
ITCH-206ENST00000486883 PLPPR3Q6T4P5 718 aa22.21■■□□□ 1.15
ITCH-206ENST00000486883 PIAS4Q8N2W9 510 aaPredicted RBP21.71■■□□□ 1.07
ITCH-206ENST00000486883 MSH5O43196 834 aa21.69■■□□□ 1.06
ITCH-206ENST00000486883 PPP6R1Q9UPN7 881 aa21.66■■□□□ 1.06
ITCH-206ENST00000486883 ADRA2BP18089 450 aa21.65■■□□□ 1.06
ITCH-206ENST00000486883 POTEDQ86YR6 584 aa21.05■□□□□ 0.96
ITCH-206ENST00000486883 SCAF1Q9H7N4 1312 aaKnown RBP19.89■□□□□ 0.77
ITCH-206ENST00000486883 MAPK8IP2Q13387 824 aaPredicted RBP19.87■□□□□ 0.77
ITCH-206ENST00000486883 DMRT2Q9Y5R5 561 aa19.7■□□□□ 0.74
ITCH-206ENST00000486883 PPP4R3CPQ6ZMV5 832 aa19.47■□□□□ 0.71
ITCH-206ENST00000486883 CNKSR2Q8WXI2 1034 aa19.09■□□□□ 0.65
ITCH-206ENST00000486883 DCAF8L1A6NGE4 600 aa19.07■□□□□ 0.64
ITCH-206ENST00000486883 HOXD11P31277 338 aaPredicted RBP18.97■□□□□ 0.63
ITCH-206ENST00000486883 RNF216Q9NWF9 866 aaPredicted RBP18.88■□□□□ 0.61
ITCH-206ENST00000486883 NCBP3Q53F19 620 aaKnown RBP18.8■□□□□ 0.6
ITCH-206ENST00000486883 CACNB1Q02641 598 aaPredicted RBP18.65■□□□□ 0.58
ITCH-206ENST00000486883 RNF39Q9H2S5 420 aa18.46■□□□□ 0.55
ITCH-206ENST00000486883 NPM3O75607 178 aaKnown RBP18.44■□□□□ 0.54
ITCH-206ENST00000486883 DNAJC5BQ9UF47 199 aa18.27■□□□□ 0.52
ITCH-206ENST00000486883 C1QBPQ07021 282 aaKnown RBP18.24■□□□□ 0.51
ITCH-206ENST00000486883 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.23■□□□□ 0.514e-7■□□□□ 10.5
ITCH-206ENST00000486883 KCNA4P22459 653 aa18.14■□□□□ 0.49
ITCH-206ENST00000486883 U3KPZ7 1027 aaPredicted RBP17.73■□□□□ 0.43
ITCH-206ENST00000486883 SLC4A2P04920 1241 aa17.56■□□□□ 0.4
ITCH-206ENST00000486883 CAPN15O75808 1086 aa17.55■□□□□ 0.4
ITCH-206ENST00000486883 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
ITCH-206ENST00000486883 APLP2Q06481 763 aa17.36■□□□□ 0.37
ITCH-206ENST00000486883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.33■□□□□ 0.36
ITCH-206ENST00000486883 HNRNPUL2Q1KMD3 747 aaKnown RBP17.33■□□□□ 0.36
ITCH-206ENST00000486883 DSG3P32926 999 aa17.32■□□□□ 0.36
ITCH-206ENST00000486883 TRHP20396 242 aaPredicted RBP17.28■□□□□ 0.36
ITCH-206ENST00000486883 SAMD1Q6SPF0 538 aaPredicted RBP17.22■□□□□ 0.35
ITCH-206ENST00000486883 ZNF219Q9P2Y4 722 aaPredicted RBP17.2■□□□□ 0.34
ITCH-206ENST00000486883 SLC4A1APQ9BWU0 796 aaKnown RBP17.19■□□□□ 0.34
ITCH-206ENST00000486883 ABCB7O75027 752 aa17.11■□□□□ 0.33
ITCH-206ENST00000486883 MYCNP04198 464 aaPredicted RBP17.09■□□□□ 0.33
ITCH-206ENST00000486883 FOXD4L1Q9NU39 408 aa16.93■□□□□ 0.3
ITCH-206ENST00000486883 POLA2Q14181 598 aa16.78■□□□□ 0.28
ITCH-206ENST00000486883 ATF5Q9Y2D1 282 aaPredicted RBP16.64■□□□□ 0.25
ITCH-206ENST00000486883 ZBTB22O15209 634 aa16.61■□□□□ 0.25
ITCH-206ENST00000486883 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
ITCH-206ENST00000486883 POTEHQ6S545 545 aa16.54■□□□□ 0.24
ITCH-206ENST00000486883 ZBTB12Q9Y330 459 aaPredicted RBP16.45■□□□□ 0.22
ITCH-206ENST00000486883 ATXN8OSP0DMR3 200 aa16.38■□□□□ 0.21
ITCH-206ENST00000486883 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
ITCH-206ENST00000486883 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
ITCH-206ENST00000486883 CHRDL2Q6WN34 429 aa16.18■□□□□ 0.18
ITCH-206ENST00000486883 FBLN2P98095 1184 aa16.11■□□□□ 0.17
ITCH-206ENST00000486883 REM2Q8IYK8 340 aaPredicted RBP16.04■□□□□ 0.16
ITCH-206ENST00000486883 CSRNP3Q8WYN3 585 aa15.93■□□□□ 0.14
ITCH-206ENST00000486883 SPDYE2BA6NHP3 402 aa15.92■□□□□ 0.14
ITCH-206ENST00000486883 SPDYE6P0CI01 402 aa15.92■□□□□ 0.14
ITCH-206ENST00000486883 SPDYE2Q495Y8 402 aa15.92■□□□□ 0.14
ITCH-206ENST00000486883 EHMT2Q96KQ7 1210 aa15.87■□□□□ 0.13
ITCH-206ENST00000486883 MKRN4PQ13434 485 aaPredicted RBP15.86■□□□□ 0.13
ITCH-206ENST00000486883 PITPNM1O00562 1244 aa15.85■□□□□ 0.13
ITCH-206ENST00000486883 PIP4P2Q8N4L2 257 aa15.79■□□□□ 0.12
ITCH-206ENST00000486883 ZNF692Q9BU19 519 aaPredicted RBP15.79■□□□□ 0.12
ITCH-206ENST00000486883 CLEC11AQ9Y240 323 aa15.7■□□□□ 0.1
ITCH-206ENST00000486883 FXR2P51116 673 aaKnown RBP eCLIP15.68■□□□□ 0.1
ITCH-206ENST00000486883 SPDYE1Q8NFV5 336 aaPredicted RBP15.66■□□□□ 0.1
ITCH-206ENST00000486883 SSUH2Q9Y2M2 353 aa15.65■□□□□ 0.1
ITCH-206ENST00000486883 HAX1O00165 279 aa15.6■□□□□ 0.09
ITCH-206ENST00000486883 PABPN1Q86U42 306 aaKnown RBP eCLIP15.54■□□□□ 0.08
ITCH-206ENST00000486883 SP7Q8TDD2 431 aaPredicted RBP15.53■□□□□ 0.08
ITCH-206ENST00000486883 PRKAR2AP13861 404 aaKnown RBP15.49■□□□□ 0.07
ITCH-206ENST00000486883 PRR29P0C7W0 189 aa15.42■□□□□ 0.06
ITCH-206ENST00000486883 CHADLQ6NUI6 762 aa15.33■□□□□ 0.04
ITCH-206ENST00000486883 EVX2Q03828 476 aa15.27■□□□□ 0.04
ITCH-206ENST00000486883 SPDYE4A6NLX3 237 aa15.23■□□□□ 0.03
ITCH-206ENST00000486883 C19orf67A6NJJ6 358 aa15.18■□□□□ 0.02
ITCH-206ENST00000486883 STAG3Q9UJ98 1225 aa15.14■□□□□ 0.01
ITCH-206ENST00000486883 FARP1Q9Y4F1 1045 aaPredicted RBP15.08■□□□□ 0
ITCH-206ENST00000486883 CD44P16070 742 aaKnown RBP15.01□□□□□ -0.01
ITCH-206ENST00000486883 GABBR2O75899 941 aa14.98□□□□□ -0.01
ITCH-206ENST00000486883 CREBZFQ9NS37 354 aa14.95□□□□□ -0.02
ITCH-206ENST00000486883 ZRANB1Q9UGI0 708 aa14.83□□□□□ -0.04
ITCH-206ENST00000486883 NPM1P06748 294 aaKnown RBP eCLIP14.78□□□□□ -0.04
ITCH-206ENST00000486883 PAK3O75914 559 aaPredicted RBP14.77□□□□□ -0.05
ITCH-206ENST00000486883 CLCN6P51797 869 aa14.77□□□□□ -0.05
ITCH-206ENST00000486883 PROM2Q8N271 834 aa14.72□□□□□ -0.05
ITCH-206ENST00000486883 ZNF579Q8NAF0 562 aaKnown RBP14.72□□□□□ -0.05
ITCH-206ENST00000486883 DCBLD2Q96PD2 775 aa14.68□□□□□ -0.06
ITCH-206ENST00000486883 MNX1P50219 401 aaPredicted RBP14.64□□□□□ -0.07
ITCH-206ENST00000486883 PLEKHG5O94827 1062 aa14.62□□□□□ -0.07
ITCH-206ENST00000486883 POTEIP0CG38 1075 aa14.59□□□□□ -0.07
ITCH-206ENST00000486883 LHX8Q68G74 356 aa14.59□□□□□ -0.07
ITCH-206ENST00000486883 MIER1Q8N108 512 aa14.59□□□□□ -0.07
ITCH-206ENST00000486883 PHF12Q96QT6 1004 aa14.58□□□□□ -0.08
ITCH-206ENST00000486883 GALR2O43603 387 aaPredicted RBP14.55□□□□□ -0.08
ITCH-206ENST00000486883 FKBP8Q14318 412 aa14.54□□□□□ -0.08
ITCH-206ENST00000486883 TSPYL2Q9H2G4 693 aaPredicted RBP14.52□□□□□ -0.09
ITCH-206ENST00000486883 PLCD3Q8N3E9 789 aa14.49□□□□□ -0.09
ITCH-206ENST00000486883 MS4A3Q96HJ5 214 aa14.38□□□□□ -0.11
ITCH-206ENST00000486883 ZBTB47Q9UFB7 747 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms