RNA–Protein interactions for RNA: ENST00000621208.4

FRMD3-207, Transcript of FERM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene FRMD3, Length 5,064 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD3-207ENST00000621208 NISCHQ9Y2I1 1504 aa13.25□□□□□ -0.29
FRMD3-207ENST00000621208 DCAF8L2P0C7V8 631 aa13.18□□□□□ -0.3
FRMD3-207ENST00000621208 ABCC9O60706 1549 aa12.42□□□□□ -0.42
FRMD3-207ENST00000621208 PABPN1Q86U42 306 aaKnown RBP eCLIP11.9□□□□□ -0.5
FRMD3-207ENST00000621208 FAM9AQ8IZU1 332 aaPredicted RBP11.7□□□□□ -0.54
FRMD3-207ENST00000621208 RB1CC1Q8TDY2 1594 aa11.63□□□□□ -0.55
FRMD3-207ENST00000621208 CCDC180Q9P1Z9 1646 aa11.57□□□□□ -0.56
FRMD3-207ENST00000621208 SHROOM4Q9ULL8 1493 aa11.43□□□□□ -0.58
FRMD3-207ENST00000621208 NACADO15069 1562 aa11.37□□□□□ -0.59
FRMD3-207ENST00000621208 ERCC6Q03468 1493 aa11.33□□□□□ -0.6
FRMD3-207ENST00000621208 TRIM41Q8WV44 630 aa11.22□□□□□ -0.61
FRMD3-207ENST00000621208 SCRIBQ14160 1630 aa11.21□□□□□ -0.62
FRMD3-207ENST00000621208 FBLN2P98095 1184 aa11.2□□□□□ -0.62
FRMD3-207ENST00000621208 AEBP2Q6ZN18 517 aaPredicted RBP11.19□□□□□ -0.62
FRMD3-207ENST00000621208 CECR2Q9BXF3 1484 aa11.18□□□□□ -0.62
FRMD3-207ENST00000621208 TRHP20396 242 aaPredicted RBP11.13□□□□□ -0.63
FRMD3-207ENST00000621208 SUPT5HO00267 1087 aaKnown RBP11.12□□□□□ -0.63
FRMD3-207ENST00000621208 NPM1P06748 294 aaKnown RBP eCLIP11.08□□□□□ -0.64
FRMD3-207ENST00000621208 DNAJC5BQ9UF47 199 aa11□□□□□ -0.65
FRMD3-207ENST00000621208 TTBK1Q5TCY1 1321 aaPredicted RBP10.95□□□□□ -0.66
FRMD3-207ENST00000621208 MYT1LQ9UL68 1186 aa10.95□□□□□ -0.66
FRMD3-207ENST00000621208 PDS5BQ9NTI5 1447 aa10.88□□□□□ -0.67
FRMD3-207ENST00000621208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.87□□□□□ -0.67
FRMD3-207ENST00000621208 HNRNPUL2Q1KMD3 747 aaKnown RBP10.87□□□□□ -0.67
FRMD3-207ENST00000621208 CHMP7Q8WUX9 453 aaPredicted RBP10.86□□□□□ -0.67
FRMD3-207ENST00000621208 OSCARQ8IYS5 282 aa10.85□□□□□ -0.67
FRMD3-207ENST00000621208 ZCCHC6Q5VYS8 1495 aaKnown RBP10.82□□□□□ -0.68
FRMD3-207ENST00000621208 BAZ1BQ9UIG0 1483 aaKnown RBP10.82□□□□□ -0.68
FRMD3-207ENST00000621208 MYO15BQ96JP2 1530 aa10.8□□□□□ -0.68
FRMD3-207ENST00000621208 ATP1B4Q9UN42 357 aaPredicted RBP10.8□□□□□ -0.68
FRMD3-207ENST00000621208 ESF1Q9H501 851 aaKnown RBP10.72□□□□□ -0.69
FRMD3-207ENST00000621208 DNAJC5Q9H3Z4 198 aa10.7□□□□□ -0.7
FRMD3-207ENST00000621208 APLP2Q06481 763 aa10.7□□□□□ -0.7
FRMD3-207ENST00000621208 DCAF1Q9Y4B6 1507 aa10.69□□□□□ -0.7
FRMD3-207ENST00000621208 SMARCA2P51531 1590 aa10.69□□□□□ -0.7
FRMD3-207ENST00000621208 CC2D2AQ9P2K1 1620 aa10.66□□□□□ -0.7
FRMD3-207ENST00000621208 RANGAP1P46060 587 aaPredicted RBP10.65□□□□□ -0.7
FRMD3-207ENST00000621208 CYB5RLQ6IPT4 315 aa10.65□□□□□ -0.7
FRMD3-207ENST00000621208 EIF4G1Q04637 1599 aaKnown RBP10.65□□□□□ -0.71
FRMD3-207ENST00000621208 BAZ1AQ9NRL2 1556 aaPredicted RBP10.55□□□□□ -0.72
FRMD3-207ENST00000621208 PLPPR3Q6T4P5 718 aa10.55□□□□□ -0.72
FRMD3-207ENST00000621208 EHMT2Q96KQ7 1210 aa10.55□□□□□ -0.72
FRMD3-207ENST00000621208 CUX2O14529 1486 aa10.54□□□□□ -0.72
FRMD3-207ENST00000621208 CEP164Q9UPV0 1460 aa10.53□□□□□ -0.72
FRMD3-207ENST00000621208 CADPSQ9ULU8 1353 aa10.52□□□□□ -0.73
FRMD3-207ENST00000621208 ARID4BQ4LE39 1312 aaPredicted RBP10.52□□□□□ -0.73
FRMD3-207ENST00000621208 UBTFP17480 764 aaKnown RBP10.51□□□□□ -0.73
FRMD3-207ENST00000621208 ATAD2BQ9ULI0 1458 aa10.44□□□□□ -0.74
FRMD3-207ENST00000621208 NCAPD3P42695 1498 aa10.44□□□□□ -0.74
FRMD3-207ENST00000621208 CHIC1Q5VXU3 224 aa10.42□□□□□ -0.74
FRMD3-207ENST00000621208 CDK11AQ9UQ88 783 aaPredicted RBP10.41□□□□□ -0.74
FRMD3-207ENST00000621208 MRC2Q9UBG0 1479 aa10.39□□□□□ -0.75
FRMD3-207ENST00000621208 ABCC8Q09428 1581 aa10.38□□□□□ -0.75
FRMD3-207ENST00000621208 FANCD2Q9BXW9 1451 aa10.35□□□□□ -0.75
FRMD3-207ENST00000621208 BCANQ96GW7 911 aa10.33□□□□□ -0.76
FRMD3-207ENST00000621208 KCNH8Q96L42 1107 aa10.32□□□□□ -0.76
FRMD3-207ENST00000621208 BICRAQ9NZM4 1560 aa10.3□□□□□ -0.76
FRMD3-207ENST00000621208 FAM69CQ0P6D2 419 aa10.29□□□□□ -0.76
FRMD3-207ENST00000621208 SOGA1O94964 1423 aa10.29□□□□□ -0.76
FRMD3-207ENST00000621208 ARID3CA6NKF2 412 aa10.28□□□□□ -0.76
FRMD3-207ENST00000621208 SCAF1Q9H7N4 1312 aaKnown RBP10.27□□□□□ -0.77
FRMD3-207ENST00000621208 CARMIL2Q6F5E8 1435 aa10.26□□□□□ -0.77
FRMD3-207ENST00000621208 STAG3Q9UJ98 1225 aa10.25□□□□□ -0.77
FRMD3-207ENST00000621208 HMGXB3Q12766 1538 aa10.24□□□□□ -0.77
FRMD3-207ENST00000621208 LAMC3Q9Y6N6 1575 aa10.24□□□□□ -0.77
FRMD3-207ENST00000621208 TDRD9Q8NDG6 1382 aaKnown RBP10.23□□□□□ -0.77
FRMD3-207ENST00000621208 IFT140Q96RY7 1462 aa10.23□□□□□ -0.77
FRMD3-207ENST00000621208 SMARCA4P51532 1647 aa10.23□□□□□ -0.77
FRMD3-207ENST00000621208 NESP48681 1621 aa10.22□□□□□ -0.77
FRMD3-207ENST00000621208 WRNQ14191 1432 aaPredicted RBP eCLIP10.21□□□□□ -0.77
FRMD3-207ENST00000621208 PLEKHD1A6NEE1 506 aa10.2□□□□□ -0.78
FRMD3-207ENST00000621208 P3H3Q8IVL6 736 aa10.17□□□□□ -0.78
FRMD3-207ENST00000621208 ZNF777Q9ULD5 760 aaPredicted RBP10.14□□□□□ -0.79
FRMD3-207ENST00000621208 MROH2BQ7Z745 1585 aa10.14□□□□□ -0.79
FRMD3-207ENST00000621208 JPH4Q96JJ6 628 aa10.14□□□□□ -0.79
FRMD3-207ENST00000621208 RSF1Q96T23 1441 aaPredicted RBP10.14□□□□□ -0.79
FRMD3-207ENST00000621208 MLECQ14165 292 aa10.13□□□□□ -0.79
FRMD3-207ENST00000621208 FOXD1Q16676 465 aa10.12□□□□□ -0.79
FRMD3-207ENST00000621208 KIF27Q86VH2 1401 aa10.11□□□□□ -0.79
FRMD3-207ENST00000621208 PHF23Q9BUL5 403 aaPredicted RBP10.1□□□□□ -0.79
FRMD3-207ENST00000621208 C14orf37Q86TY3 774 aa10.09□□□□□ -0.79
FRMD3-207ENST00000621208 GRIN2BQ13224 1484 aa10.06□□□□□ -0.8
FRMD3-207ENST00000621208 PTPRGP23470 1445 aa10.05□□□□□ -0.8
FRMD3-207ENST00000621208 AQRO60306 1485 aaKnown RBP eCLIP10.05□□□□□ -0.8
FRMD3-207ENST00000621208 TOP2AP11388 1531 aaKnown RBP10.04□□□□□ -0.8
FRMD3-207ENST00000621208 UNC13AQ9UPW8 1703 aa10.04□□□□□ -0.8
FRMD3-207ENST00000621208 DMRT2Q9Y5R5 561 aa10.01□□□□□ -0.81
FRMD3-207ENST00000621208 GAPVD1Q14C86 1478 aa10.01□□□□□ -0.81
FRMD3-207ENST00000621208 PPP1R15AO75807 674 aaPredicted RBP10□□□□□ -0.81
FRMD3-207ENST00000621208 SYNJ1O43426 1573 aa10□□□□□ -0.81
FRMD3-207ENST00000621208 CFTRP13569 1480 aa10□□□□□ -0.81
FRMD3-207ENST00000621208 CCDC88BA6NC98 1476 aa9.99□□□□□ -0.81
FRMD3-207ENST00000621208 TSPY4P0CV99 314 aa9.98□□□□□ -0.81
FRMD3-207ENST00000621208 TSPY10P0CW01 314 aa9.98□□□□□ -0.81
FRMD3-207ENST00000621208 CSRNP3Q8WYN3 585 aa9.98□□□□□ -0.81
FRMD3-207ENST00000621208 POGZQ7Z3K3 1410 aa9.97□□□□□ -0.81
FRMD3-207ENST00000621208 CARMIL1Q5VZK9 1371 aa9.96□□□□□ -0.81
FRMD3-207ENST00000621208 DCAF8L1A6NGE4 600 aa9.96□□□□□ -0.82
FRMD3-207ENST00000621208 CHGAP10645 457 aaKnown RBP9.96□□□□□ -0.82
FRMD3-207ENST00000621208 SENP3Q9H4L4 574 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms