RNA–Protein interactions for RNA: ENST00000367591.4

PEX3-201, Transcript of peroxisomal biogenesis factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX3, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3-201ENST00000367591 AEBP2Q6ZN18 517 aaPredicted RBP20.7■□□□□ 0.9
PEX3-201ENST00000367591 CHIC1Q5VXU3 224 aa19.99■□□□□ 0.79
PEX3-201ENST00000367591 SENP3Q9H4L4 574 aaPredicted RBP17.59■□□□□ 0.41
PEX3-201ENST00000367591 PHF23Q9BUL5 403 aaPredicted RBP17.55■□□□□ 0.4
PEX3-201ENST00000367591 POTEDQ86YR6 584 aa16.83■□□□□ 0.28
PEX3-201ENST00000367591 FOXD1Q16676 465 aa16.36■□□□□ 0.21
PEX3-201ENST00000367591 PLPPR3Q6T4P5 718 aa16.13■□□□□ 0.17
PEX3-201ENST00000367591 PPP6R1Q9UPN7 881 aa15.57■□□□□ 0.08
PEX3-201ENST00000367591 ADRA2BP18089 450 aa15.53■□□□□ 0.08
PEX3-201ENST00000367591 PIAS4Q8N2W9 510 aaPredicted RBP15.36■□□□□ 0.05
PEX3-201ENST00000367591 MSH5O43196 834 aa15.17■□□□□ 0.02
PEX3-201ENST00000367591 SCAF1Q9H7N4 1312 aaKnown RBP14.21□□□□□ -0.14
PEX3-201ENST00000367591 PPP4R3CPQ6ZMV5 832 aa14.17□□□□□ -0.14
PEX3-201ENST00000367591 MAPK8IP2Q13387 824 aaPredicted RBP14.15□□□□□ -0.14
PEX3-201ENST00000367591 DMRT2Q9Y5R5 561 aa14.01□□□□□ -0.17
PEX3-201ENST00000367591 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
PEX3-201ENST00000367591 NCBP3Q53F19 620 aaKnown RBP13.73□□□□□ -0.21
PEX3-201ENST00000367591 HOXD11P31277 338 aaPredicted RBP13.64□□□□□ -0.23
PEX3-201ENST00000367591 RNF216Q9NWF9 866 aaPredicted RBP13.63□□□□□ -0.23
PEX3-201ENST00000367591 KCNA4P22459 653 aa13.6□□□□□ -0.23
PEX3-201ENST00000367591 NPM3O75607 178 aaKnown RBP13.54□□□□□ -0.24
PEX3-201ENST00000367591 CACNB1Q02641 598 aaPredicted RBP13.54□□□□□ -0.24
PEX3-201ENST00000367591 DCAF8L1A6NGE4 600 aa13.38□□□□□ -0.27
PEX3-201ENST00000367591 DNAJC5BQ9UF47 199 aa13.22□□□□□ -0.29
PEX3-201ENST00000367591 RNF39Q9H2S5 420 aa12.99□□□□□ -0.33
PEX3-201ENST00000367591 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.97□□□□□ -0.33
PEX3-201ENST00000367591 POTEHQ6S545 545 aa12.92□□□□□ -0.34
PEX3-201ENST00000367591 SLC4A1APQ9BWU0 796 aaKnown RBP12.89□□□□□ -0.35
PEX3-201ENST00000367591 SLC4A2P04920 1241 aa12.85□□□□□ -0.35
PEX3-201ENST00000367591 C1QBPQ07021 282 aaKnown RBP12.82□□□□□ -0.36
PEX3-201ENST00000367591 U3KPZ7 1027 aaPredicted RBP12.76□□□□□ -0.37
PEX3-201ENST00000367591 FOXD4L1Q9NU39 408 aa12.57□□□□□ -0.4
PEX3-201ENST00000367591 ZBTB22O15209 634 aa12.52□□□□□ -0.41
PEX3-201ENST00000367591 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.51□□□□□ -0.41
PEX3-201ENST00000367591 MYCNP04198 464 aaPredicted RBP12.51□□□□□ -0.41
PEX3-201ENST00000367591 HNRNPUL2Q1KMD3 747 aaKnown RBP12.51□□□□□ -0.41
PEX3-201ENST00000367591 SPINK5Q9NQ38 1064 aaPredicted RBP12.46□□□□□ -0.41
PEX3-201ENST00000367591 SAMD1Q6SPF0 538 aaPredicted RBP12.45□□□□□ -0.42
PEX3-201ENST00000367591 APLP2Q06481 763 aa12.41□□□□□ -0.42
PEX3-201ENST00000367591 CAPN15O75808 1086 aa12.41□□□□□ -0.42
PEX3-201ENST00000367591 ZNF219Q9P2Y4 722 aaPredicted RBP12.3□□□□□ -0.44
PEX3-201ENST00000367591 TRHP20396 242 aaPredicted RBP12.29□□□□□ -0.44
PEX3-201ENST00000367591 DSG3P32926 999 aa12.27□□□□□ -0.44
PEX3-201ENST00000367591 EHMT2Q96KQ7 1210 aa12.26□□□□□ -0.45
PEX3-201ENST00000367591 CSRNP3Q8WYN3 585 aa12.25□□□□□ -0.45
PEX3-201ENST00000367591 ATF5Q9Y2D1 282 aaPredicted RBP12.19□□□□□ -0.46
PEX3-201ENST00000367591 ATXN8OSP0DMR3 200 aa12.16□□□□□ -0.46
PEX3-201ENST00000367591 ABCB7O75027 752 aa12.15□□□□□ -0.46
PEX3-201ENST00000367591 POLA2Q14181 598 aa12.06□□□□□ -0.48
PEX3-201ENST00000367591 ZBTB12Q9Y330 459 aaPredicted RBP11.84□□□□□ -0.51
PEX3-201ENST00000367591 RBM42Q9BTD8 480 aaKnown RBP11.7□□□□□ -0.54
PEX3-201ENST00000367591 FBLN2P98095 1184 aa11.68□□□□□ -0.54
PEX3-201ENST00000367591 MKRN4PQ13434 485 aaPredicted RBP11.67□□□□□ -0.54
PEX3-201ENST00000367591 OSCARQ8IYS5 282 aa11.65□□□□□ -0.54
PEX3-201ENST00000367591 SPDYE2BA6NHP3 402 aa11.5□□□□□ -0.57
PEX3-201ENST00000367591 SPDYE6P0CI01 402 aa11.5□□□□□ -0.57
PEX3-201ENST00000367591 SPDYE2Q495Y8 402 aa11.5□□□□□ -0.57
PEX3-201ENST00000367591 AKT1S1Q96B36 256 aa11.5□□□□□ -0.57
PEX3-201ENST00000367591 SP7Q8TDD2 431 aaPredicted RBP11.43□□□□□ -0.58
PEX3-201ENST00000367591 ZNF692Q9BU19 519 aaPredicted RBP11.42□□□□□ -0.58
PEX3-201ENST00000367591 SSUH2Q9Y2M2 353 aa11.4□□□□□ -0.58
PEX3-201ENST00000367591 REM2Q8IYK8 340 aaPredicted RBP11.39□□□□□ -0.59
PEX3-201ENST00000367591 CHRDL2Q6WN34 429 aa11.31□□□□□ -0.6
PEX3-201ENST00000367591 PLSCR2Q9NRY7 297 aa11.29□□□□□ -0.6
PEX3-201ENST00000367591 SPDYE4A6NLX3 237 aa11.28□□□□□ -0.6
PEX3-201ENST00000367591 PITPNM1O00562 1244 aa11.27□□□□□ -0.61
PEX3-201ENST00000367591 PABPN1Q86U42 306 aaKnown RBP eCLIP11.26□□□□□ -0.61
PEX3-201ENST00000367591 SPDYE1Q8NFV5 336 aaPredicted RBP11.21□□□□□ -0.61
PEX3-201ENST00000367591 CLEC11AQ9Y240 323 aa11.16□□□□□ -0.62
PEX3-201ENST00000367591 PIP4P2Q8N4L2 257 aa11.11□□□□□ -0.63
PEX3-201ENST00000367591 FXR2P51116 673 aaKnown RBP eCLIP11.1□□□□□ -0.63
PEX3-201ENST00000367591 PROM2Q8N271 834 aa11.09□□□□□ -0.63
PEX3-201ENST00000367591 FKBP8Q14318 412 aa11.07□□□□□ -0.64
PEX3-201ENST00000367591 PRR29P0C7W0 189 aa11.04□□□□□ -0.64
PEX3-201ENST00000367591 STAG3Q9UJ98 1225 aa11.02□□□□□ -0.65
PEX3-201ENST00000367591 PRKAR2AP13861 404 aaKnown RBP10.97□□□□□ -0.65
PEX3-201ENST00000367591 CHADLQ6NUI6 762 aa10.92□□□□□ -0.66
PEX3-201ENST00000367591 CREBZFQ9NS37 354 aa10.85□□□□□ -0.67
PEX3-201ENST00000367591 HAX1O00165 279 aa10.81□□□□□ -0.68
PEX3-201ENST00000367591 FARP1Q9Y4F1 1045 aaPredicted RBP10.81□□□□□ -0.68
PEX3-201ENST00000367591 FBXO3Q9UK99 471 aa10.75□□□□□ -0.69
PEX3-201ENST00000367591 MNX1P50219 401 aaPredicted RBP10.74□□□□□ -0.69
PEX3-201ENST00000367591 C19orf67A6NJJ6 358 aa10.73□□□□□ -0.69
PEX3-201ENST00000367591 EVX2Q03828 476 aa10.72□□□□□ -0.69
PEX3-201ENST00000367591 MIER1Q8N108 512 aa10.72□□□□□ -0.69
PEX3-201ENST00000367591 LHX8Q68G74 356 aa10.7□□□□□ -0.7
PEX3-201ENST00000367591 PLCD3Q8N3E9 789 aa10.67□□□□□ -0.7
PEX3-201ENST00000367591 PLEKHG5O94827 1062 aa10.66□□□□□ -0.7
PEX3-201ENST00000367591 NPM1P06748 294 aaKnown RBP eCLIP10.65□□□□□ -0.7
PEX3-201ENST00000367591 CD44P16070 742 aaKnown RBP10.65□□□□□ -0.71
PEX3-201ENST00000367591 VASPP50552 380 aaPredicted RBP10.61□□□□□ -0.71
PEX3-201ENST00000367591 ZBTB47Q9UFB7 747 aaPredicted RBP10.58□□□□□ -0.72
PEX3-201ENST00000367591 ZRANB1Q9UGI0 708 aa10.54□□□□□ -0.72
PEX3-201ENST00000367591 PAK3O75914 559 aaPredicted RBP10.53□□□□□ -0.72
PEX3-201ENST00000367591 ZNF579Q8NAF0 562 aaKnown RBP10.51□□□□□ -0.73
PEX3-201ENST00000367591 RASEFQ8IZ41 740 aa10.49□□□□□ -0.73
PEX3-201ENST00000367591 GABBR2O75899 941 aa10.48□□□□□ -0.73
PEX3-201ENST00000367591 NUBP1P53384 320 aa10.48□□□□□ -0.73
PEX3-201ENST00000367591 TSPYL2Q9H2G4 693 aaPredicted RBP10.47□□□□□ -0.73
PEX3-201ENST00000367591 KLHL34Q8N239 644 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 176.5 ms