RNA–Protein interactions for RNA: ENST00000502582.1

CDC42SE2-203, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-203ENST00000502582 AEBP2Q6ZN18 517 aaPredicted RBP20.77■□□□□ 0.92
CDC42SE2-203ENST00000502582 CHIC1Q5VXU3 224 aa19.96■□□□□ 0.79
CDC42SE2-203ENST00000502582 SENP3Q9H4L4 574 aaPredicted RBP17.73■□□□□ 0.43
CDC42SE2-203ENST00000502582 PHF23Q9BUL5 403 aaPredicted RBP17.52■□□□□ 0.4
CDC42SE2-203ENST00000502582 FOXD1Q16676 465 aa16.47■□□□□ 0.23
CDC42SE2-203ENST00000502582 PLPPR3Q6T4P5 718 aa16.07■□□□□ 0.16
CDC42SE2-203ENST00000502582 PPP6R1Q9UPN7 881 aa15.56■□□□□ 0.08
CDC42SE2-203ENST00000502582 ADRA2BP18089 450 aa15.53■□□□□ 0.08
CDC42SE2-203ENST00000502582 PIAS4Q8N2W9 510 aaPredicted RBP15.46■□□□□ 0.07
CDC42SE2-203ENST00000502582 MSH5O43196 834 aa15.37■□□□□ 0.05
CDC42SE2-203ENST00000502582 POTEDQ86YR6 584 aa14.59□□□□□ -0.07
CDC42SE2-203ENST00000502582 SCAF1Q9H7N4 1312 aaKnown RBP14.27□□□□□ -0.12
CDC42SE2-203ENST00000502582 MAPK8IP2Q13387 824 aaPredicted RBP14.2□□□□□ -0.14
CDC42SE2-203ENST00000502582 PPP4R3CPQ6ZMV5 832 aa14.11□□□□□ -0.15
CDC42SE2-203ENST00000502582 DMRT2Q9Y5R5 561 aa14.08□□□□□ -0.16
CDC42SE2-203ENST00000502582 CNKSR2Q8WXI2 1034 aa13.8□□□□□ -0.2
CDC42SE2-203ENST00000502582 NCBP3Q53F19 620 aaKnown RBP13.66□□□□□ -0.22
CDC42SE2-203ENST00000502582 HOXD11P31277 338 aaPredicted RBP13.65□□□□□ -0.22
CDC42SE2-203ENST00000502582 RNF216Q9NWF9 866 aaPredicted RBP13.62□□□□□ -0.23
CDC42SE2-203ENST00000502582 DCAF8L1A6NGE4 600 aa13.5□□□□□ -0.25
CDC42SE2-203ENST00000502582 NPM3O75607 178 aaKnown RBP13.42□□□□□ -0.26
CDC42SE2-203ENST00000502582 KCNA4P22459 653 aa13.35□□□□□ -0.27
CDC42SE2-203ENST00000502582 DNAJC5BQ9UF47 199 aa13.17□□□□□ -0.3
CDC42SE2-203ENST00000502582 RNF39Q9H2S5 420 aa13.11□□□□□ -0.31
CDC42SE2-203ENST00000502582 CACNB1Q02641 598 aaPredicted RBP13.05□□□□□ -0.32
CDC42SE2-203ENST00000502582 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.03□□□□□ -0.32
CDC42SE2-203ENST00000502582 C1QBPQ07021 282 aaKnown RBP12.96□□□□□ -0.33
CDC42SE2-203ENST00000502582 SLC4A2P04920 1241 aa12.75□□□□□ -0.37
CDC42SE2-203ENST00000502582 U3KPZ7 1027 aaPredicted RBP12.74□□□□□ -0.37
CDC42SE2-203ENST00000502582 SLC4A1APQ9BWU0 796 aaKnown RBP12.67□□□□□ -0.38
CDC42SE2-203ENST00000502582 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.52□□□□□ -0.41
CDC42SE2-203ENST00000502582 HNRNPUL2Q1KMD3 747 aaKnown RBP12.52□□□□□ -0.41
CDC42SE2-203ENST00000502582 CAPN15O75808 1086 aa12.49□□□□□ -0.41
CDC42SE2-203ENST00000502582 SPINK5Q9NQ38 1064 aaPredicted RBP12.49□□□□□ -0.41
CDC42SE2-203ENST00000502582 APLP2Q06481 763 aa12.47□□□□□ -0.41
CDC42SE2-203ENST00000502582 SAMD1Q6SPF0 538 aaPredicted RBP12.44□□□□□ -0.42
CDC42SE2-203ENST00000502582 MYCNP04198 464 aaPredicted RBP12.43□□□□□ -0.42
CDC42SE2-203ENST00000502582 FOXD4L1Q9NU39 408 aa12.41□□□□□ -0.42
CDC42SE2-203ENST00000502582 DSG3P32926 999 aa12.35□□□□□ -0.43
CDC42SE2-203ENST00000502582 TRHP20396 242 aaPredicted RBP12.34□□□□□ -0.43
CDC42SE2-203ENST00000502582 ZNF219Q9P2Y4 722 aaPredicted RBP12.33□□□□□ -0.44
CDC42SE2-203ENST00000502582 ZBTB22O15209 634 aa12.26□□□□□ -0.45
CDC42SE2-203ENST00000502582 ABCB7O75027 752 aa12.19□□□□□ -0.46
CDC42SE2-203ENST00000502582 ATF5Q9Y2D1 282 aaPredicted RBP12.09□□□□□ -0.47
CDC42SE2-203ENST00000502582 POLA2Q14181 598 aa12.07□□□□□ -0.48
CDC42SE2-203ENST00000502582 ATXN8OSP0DMR3 200 aa12.03□□□□□ -0.48
CDC42SE2-203ENST00000502582 CSRNP3Q8WYN3 585 aa11.92□□□□□ -0.5
CDC42SE2-203ENST00000502582 EHMT2Q96KQ7 1210 aa11.88□□□□□ -0.51
CDC42SE2-203ENST00000502582 ZBTB12Q9Y330 459 aaPredicted RBP11.85□□□□□ -0.51
CDC42SE2-203ENST00000502582 RBM42Q9BTD8 480 aaKnown RBP11.81□□□□□ -0.52
CDC42SE2-203ENST00000502582 FBLN2P98095 1184 aa11.65□□□□□ -0.54
CDC42SE2-203ENST00000502582 OSCARQ8IYS5 282 aa11.64□□□□□ -0.55
CDC42SE2-203ENST00000502582 AKT1S1Q96B36 256 aa11.58□□□□□ -0.56
CDC42SE2-203ENST00000502582 MKRN4PQ13434 485 aaPredicted RBP11.54□□□□□ -0.56
CDC42SE2-203ENST00000502582 SPDYE2BA6NHP3 402 aa11.49□□□□□ -0.57
CDC42SE2-203ENST00000502582 SPDYE6P0CI01 402 aa11.49□□□□□ -0.57
CDC42SE2-203ENST00000502582 SPDYE2Q495Y8 402 aa11.49□□□□□ -0.57
CDC42SE2-203ENST00000502582 POTEHQ6S545 545 aa11.49□□□□□ -0.57
CDC42SE2-203ENST00000502582 REM2Q8IYK8 340 aaPredicted RBP11.45□□□□□ -0.58
CDC42SE2-203ENST00000502582 CHRDL2Q6WN34 429 aa11.44□□□□□ -0.58
CDC42SE2-203ENST00000502582 ZNF692Q9BU19 519 aaPredicted RBP11.4□□□□□ -0.58
CDC42SE2-203ENST00000502582 SSUH2Q9Y2M2 353 aa11.34□□□□□ -0.59
CDC42SE2-203ENST00000502582 PITPNM1O00562 1244 aa11.31□□□□□ -0.6
CDC42SE2-203ENST00000502582 SPDYE1Q8NFV5 336 aaPredicted RBP11.25□□□□□ -0.61
CDC42SE2-203ENST00000502582 PABPN1Q86U42 306 aaKnown RBP eCLIP11.22□□□□□ -0.61
CDC42SE2-203ENST00000502582 PIP4P2Q8N4L2 257 aa11.21□□□□□ -0.61
CDC42SE2-203ENST00000502582 CLEC11AQ9Y240 323 aa11.21□□□□□ -0.61
CDC42SE2-203ENST00000502582 FXR2P51116 673 aaKnown RBP eCLIP11.19□□□□□ -0.62
CDC42SE2-203ENST00000502582 SPDYE4A6NLX3 237 aa11.14□□□□□ -0.63
CDC42SE2-203ENST00000502582 PRR29P0C7W0 189 aa11.07□□□□□ -0.64
CDC42SE2-203ENST00000502582 PRKAR2AP13861 404 aaKnown RBP11.04□□□□□ -0.64
CDC42SE2-203ENST00000502582 STAG3Q9UJ98 1225 aa10.99□□□□□ -0.65
CDC42SE2-203ENST00000502582 HAX1O00165 279 aa10.97□□□□□ -0.65
CDC42SE2-203ENST00000502582 CHADLQ6NUI6 762 aa10.94□□□□□ -0.66
CDC42SE2-203ENST00000502582 PROM2Q8N271 834 aa10.88□□□□□ -0.67
CDC42SE2-203ENST00000502582 SP7Q8TDD2 431 aaPredicted RBP10.88□□□□□ -0.67
CDC42SE2-203ENST00000502582 FARP1Q9Y4F1 1045 aaPredicted RBP10.83□□□□□ -0.68
CDC42SE2-203ENST00000502582 C19orf67A6NJJ6 358 aa10.81□□□□□ -0.68
CDC42SE2-203ENST00000502582 EVX2Q03828 476 aa10.81□□□□□ -0.68
CDC42SE2-203ENST00000502582 CREBZFQ9NS37 354 aa10.81□□□□□ -0.68
CDC42SE2-203ENST00000502582 FKBP8Q14318 412 aa10.8□□□□□ -0.68
CDC42SE2-203ENST00000502582 CD44P16070 742 aaKnown RBP10.7□□□□□ -0.7
CDC42SE2-203ENST00000502582 NPM1P06748 294 aaKnown RBP eCLIP10.66□□□□□ -0.7
CDC42SE2-203ENST00000502582 MNX1P50219 401 aaPredicted RBP10.64□□□□□ -0.71
CDC42SE2-203ENST00000502582 PLEKHG5O94827 1062 aa10.63□□□□□ -0.71
CDC42SE2-203ENST00000502582 MIER1Q8N108 512 aa10.63□□□□□ -0.71
CDC42SE2-203ENST00000502582 GABBR2O75899 941 aa10.61□□□□□ -0.71
CDC42SE2-203ENST00000502582 ZRANB1Q9UGI0 708 aa10.59□□□□□ -0.71
CDC42SE2-203ENST00000502582 PAK3O75914 559 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE2-203ENST00000502582 CLCN6P51797 869 aa10.57□□□□□ -0.72
CDC42SE2-203ENST00000502582 PLCD3Q8N3E9 789 aa10.56□□□□□ -0.72
CDC42SE2-203ENST00000502582 FBXO3Q9UK99 471 aa10.56□□□□□ -0.72
CDC42SE2-203ENST00000502582 ZNF579Q8NAF0 562 aaKnown RBP10.54□□□□□ -0.72
CDC42SE2-203ENST00000502582 ZBTB47Q9UFB7 747 aaPredicted RBP10.49□□□□□ -0.73
CDC42SE2-203ENST00000502582 TSPYL2Q9H2G4 693 aaPredicted RBP10.45□□□□□ -0.74
CDC42SE2-203ENST00000502582 PHF12Q96QT6 1004 aa10.44□□□□□ -0.74
CDC42SE2-203ENST00000502582 RASEFQ8IZ41 740 aa10.4□□□□□ -0.74
CDC42SE2-203ENST00000502582 GALR2O43603 387 aaPredicted RBP10.39□□□□□ -0.75
CDC42SE2-203ENST00000502582 DCBLD2Q96PD2 775 aa10.39□□□□□ -0.75
CDC42SE2-203ENST00000502582 VASPP50552 380 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms