RNA–Protein interactions for RNA: ENST00000523702.5

CPS1-211, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 4

Gene CPS1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-211ENST00000523702 AEBP2Q6ZN18 517 aaPredicted RBP25.62■■□□□ 1.69
CPS1-211ENST00000523702 CHIC1Q5VXU3 224 aa25.34■■□□□ 1.65
CPS1-211ENST00000523702 PHF23Q9BUL5 403 aaPredicted RBP22.47■■□□□ 1.19
CPS1-211ENST00000523702 SENP3Q9H4L4 574 aaPredicted RBP21.44■■□□□ 1.02
CPS1-211ENST00000523702 PLPPR3Q6T4P5 718 aa20.71■□□□□ 0.91
CPS1-211ENST00000523702 FOXD1Q16676 465 aa19.99■□□□□ 0.79
CPS1-211ENST00000523702 PPP6R1Q9UPN7 881 aa19.71■□□□□ 0.75
CPS1-211ENST00000523702 ADRA2BP18089 450 aa19.67■□□□□ 0.74
CPS1-211ENST00000523702 PIAS4Q8N2W9 510 aaPredicted RBP18.89■□□□□ 0.61
CPS1-211ENST00000523702 KCNA4P22459 653 aa18.57■□□□□ 0.56
CPS1-211ENST00000523702 PPP4R3CPQ6ZMV5 832 aa18.39■□□□□ 0.53
CPS1-211ENST00000523702 MSH5O43196 834 aa18.07■□□□□ 0.48
CPS1-211ENST00000523702 NCBP3Q53F19 620 aaKnown RBP17.91■□□□□ 0.46
CPS1-211ENST00000523702 NPM3O75607 178 aaKnown RBP17.81■□□□□ 0.44
CPS1-211ENST00000523702 EHMT2Q96KQ7 1210 aa17.79■□□□□ 0.44
CPS1-211ENST00000523702 MAPK8IP2Q13387 824 aaPredicted RBP17.77■□□□□ 0.44
CPS1-211ENST00000523702 SCAF1Q9H7N4 1312 aaKnown RBP17.75■□□□□ 0.43
CPS1-211ENST00000523702 CNKSR2Q8WXI2 1034 aa17.71■□□□□ 0.43
CPS1-211ENST00000523702 SLC4A1APQ9BWU0 796 aaKnown RBP17.67■□□□□ 0.42
CPS1-211ENST00000523702 CSRNP3Q8WYN3 585 aa17.41■□□□□ 0.38
CPS1-211ENST00000523702 RNF216Q9NWF9 866 aaPredicted RBP17.25■□□□□ 0.35
CPS1-211ENST00000523702 DMRT2Q9Y5R5 561 aa17.24■□□□□ 0.35
CPS1-211ENST00000523702 ZBTB22O15209 634 aa17.15■□□□□ 0.34
CPS1-211ENST00000523702 DNAJC5BQ9UF47 199 aa17.09■□□□□ 0.33
CPS1-211ENST00000523702 HOXD11P31277 338 aaPredicted RBP17.08■□□□□ 0.32
CPS1-211ENST00000523702 FOXD4L1Q9NU39 408 aa16.84■□□□□ 0.29
CPS1-211ENST00000523702 SLC4A2P04920 1241 aa16.76■□□□□ 0.27
CPS1-211ENST00000523702 DCAF8L1A6NGE4 600 aa16.48■□□□□ 0.23
CPS1-211ENST00000523702 MYCNP04198 464 aaPredicted RBP16.33■□□□□ 0.2
CPS1-211ENST00000523702 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.25■□□□□ 0.19
CPS1-211ENST00000523702 ATXN8OSP0DMR3 200 aa16.14■□□□□ 0.17
CPS1-211ENST00000523702 U3KPZ7 1027 aaPredicted RBP16.12■□□□□ 0.17
CPS1-211ENST00000523702 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
CPS1-211ENST00000523702 SAMD1Q6SPF0 538 aaPredicted RBP15.88■□□□□ 0.13
CPS1-211ENST00000523702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.86■□□□□ 0.13
CPS1-211ENST00000523702 HNRNPUL2Q1KMD3 747 aaKnown RBP15.86■□□□□ 0.13
CPS1-211ENST00000523702 POTEDQ86YR6 584 aa15.78■□□□□ 0.12
CPS1-211ENST00000523702 FKBP8Q14318 412 aa15.64■□□□□ 0.09
CPS1-211ENST00000523702 RNF39Q9H2S5 420 aa15.63■□□□□ 0.09
CPS1-211ENST00000523702 ZNF219Q9P2Y4 722 aaPredicted RBP15.63■□□□□ 0.09
CPS1-211ENST00000523702 SPINK5Q9NQ38 1064 aaPredicted RBP15.58■□□□□ 0.08
CPS1-211ENST00000523702 APLP2Q06481 763 aa15.52■□□□□ 0.08
CPS1-211ENST00000523702 TRHP20396 242 aaPredicted RBP15.47■□□□□ 0.07
CPS1-211ENST00000523702 CAPN15O75808 1086 aa15.39■□□□□ 0.05
CPS1-211ENST00000523702 C1QBPQ07021 282 aaKnown RBP15.39■□□□□ 0.05
CPS1-211ENST00000523702 MKRN4PQ13434 485 aaPredicted RBP15.36■□□□□ 0.05
CPS1-211ENST00000523702 POLA2Q14181 598 aa15.34■□□□□ 0.05
CPS1-211ENST00000523702 ABCB7O75027 752 aa15.22■□□□□ 0.03
CPS1-211ENST00000523702 SPDYE4A6NLX3 237 aa15.14■□□□□ 0.01
CPS1-211ENST00000523702 FBLN2P98095 1184 aa15.12■□□□□ 0.01
CPS1-211ENST00000523702 RTN4Q9NQC3 1192 aaKnown RBP15.12■□□□□ 0.01
CPS1-211ENST00000523702 DSG3P32926 999 aa15.07■□□□□ 0
CPS1-211ENST00000523702 AMER1Q5JTC6 1135 aaPredicted RBP14.96□□□□□ -0.01
CPS1-211ENST00000523702 PROM2Q8N271 834 aa14.96□□□□□ -0.01
CPS1-211ENST00000523702 ZBTB12Q9Y330 459 aaPredicted RBP14.91□□□□□ -0.02
CPS1-211ENST00000523702 CACNB1Q02641 598 aaPredicted RBP14.86□□□□□ -0.03
CPS1-211ENST00000523702 FBXO3Q9UK99 471 aa14.8□□□□□ -0.04
CPS1-211ENST00000523702 OSCARQ8IYS5 282 aa14.78□□□□□ -0.04
CPS1-211ENST00000523702 ZNF692Q9BU19 519 aaPredicted RBP14.72□□□□□ -0.05
CPS1-211ENST00000523702 VASPP50552 380 aaPredicted RBP14.69□□□□□ -0.06
CPS1-211ENST00000523702 SPDYE2BA6NHP3 402 aa14.64□□□□□ -0.07
CPS1-211ENST00000523702 SPDYE6P0CI01 402 aa14.64□□□□□ -0.07
CPS1-211ENST00000523702 SPDYE2Q495Y8 402 aa14.64□□□□□ -0.07
CPS1-211ENST00000523702 SSUH2Q9Y2M2 353 aa14.64□□□□□ -0.07
CPS1-211ENST00000523702 IFNLR1Q8IU57 520 aaPredicted RBP14.62□□□□□ -0.07
CPS1-211ENST00000523702 PABPN1Q86U42 306 aaKnown RBP eCLIP14.56□□□□□ -0.08
CPS1-211ENST00000523702 STAG3Q9UJ98 1225 aa14.39□□□□□ -0.11
CPS1-211ENST00000523702 SLC24A1O60721 1099 aa14.32□□□□□ -0.12
CPS1-211ENST00000523702 PKD2Q13563 968 aa14.32□□□□□ -0.12
CPS1-211ENST00000523702 KLHL34Q8N239 644 aa14.32□□□□□ -0.12
CPS1-211ENST00000523702 MIER1Q8N108 512 aa14.31□□□□□ -0.12
CPS1-211ENST00000523702 PLCD3Q8N3E9 789 aa14.3□□□□□ -0.12
CPS1-211ENST00000523702 SPOCK2Q92563 424 aa14.25□□□□□ -0.13
CPS1-211ENST00000523702 AKT1S1Q96B36 256 aa14.18□□□□□ -0.14
CPS1-211ENST00000523702 RBM42Q9BTD8 480 aaKnown RBP14.17□□□□□ -0.14
CPS1-211ENST00000523702 REM2Q8IYK8 340 aaPredicted RBP14.12□□□□□ -0.15
CPS1-211ENST00000523702 SPDYE1Q8NFV5 336 aaPredicted RBP14.09□□□□□ -0.15
CPS1-211ENST00000523702 CLEC11AQ9Y240 323 aa14.09□□□□□ -0.15
CPS1-211ENST00000523702 DCAF8L2P0C7V8 631 aa14.08□□□□□ -0.16
CPS1-211ENST00000523702 ECM2O94769 699 aaPredicted RBP14.05□□□□□ -0.16
CPS1-211ENST00000523702 PLEKHG5O94827 1062 aa14.02□□□□□ -0.17
CPS1-211ENST00000523702 PRR29P0C7W0 189 aa14□□□□□ -0.17
CPS1-211ENST00000523702 CREBZFQ9NS37 354 aa14□□□□□ -0.17
CPS1-211ENST00000523702 RGL2O15211 777 aa13.99□□□□□ -0.17
CPS1-211ENST00000523702 CIZ1Q9ULV3 898 aaPredicted RBP13.99□□□□□ -0.17
CPS1-211ENST00000523702 ZBTB47Q9UFB7 747 aaPredicted RBP13.98□□□□□ -0.17
CPS1-211ENST00000523702 PITPNM1O00562 1244 aa13.95□□□□□ -0.18
CPS1-211ENST00000523702 NPM1P06748 294 aaKnown RBP eCLIP13.94□□□□□ -0.18
CPS1-211ENST00000523702 MNX1P50219 401 aaPredicted RBP13.94□□□□□ -0.18
CPS1-211ENST00000523702 NUBP1P53384 320 aa13.94□□□□□ -0.18
CPS1-211ENST00000523702 PLCB2Q00722 1185 aa13.92□□□□□ -0.18
CPS1-211ENST00000523702 DCAF8Q5TAQ9 597 aa13.81□□□□□ -0.2
CPS1-211ENST00000523702 GSE1Q14687 1217 aa13.78□□□□□ -0.2
CPS1-211ENST00000523702 CHADLQ6NUI6 762 aa13.78□□□□□ -0.2
CPS1-211ENST00000523702 RASEFQ8IZ41 740 aa13.78□□□□□ -0.2
CPS1-211ENST00000523702 RNF25Q96BH1 459 aaPredicted RBP13.78□□□□□ -0.2
CPS1-211ENST00000523702 BBXQ8WY36 941 aaPredicted RBP13.75□□□□□ -0.21
CPS1-211ENST00000523702 HAP1P54257 671 aaPredicted RBP13.73□□□□□ -0.21
CPS1-211ENST00000523702 TRIM41Q8WV44 630 aa13.72□□□□□ -0.21
CPS1-211ENST00000523702 CHGAP10645 457 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms