RNA–Protein interactions for RNA: ENST00000467807.5

ZNF542P-202, Transcript of zinc finger protein 542, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene ZNF542P, Length 3,209 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF542P-202ENST00000467807 NISCHQ9Y2I1 1504 aa14.18□□□□□ -0.14
ZNF542P-202ENST00000467807 CCDC180Q9P1Z9 1646 aa12.4□□□□□ -0.42
ZNF542P-202ENST00000467807 ZCCHC6Q5VYS8 1495 aaKnown RBP11.95□□□□□ -0.5
ZNF542P-202ENST00000467807 DCAF1Q9Y4B6 1507 aa11.75□□□□□ -0.53
ZNF542P-202ENST00000467807 ABCC9O60706 1549 aa11.6□□□□□ -0.55
ZNF542P-202ENST00000467807 MYO15BQ96JP2 1530 aa11.59□□□□□ -0.55
ZNF542P-202ENST00000467807 SHROOM4Q9ULL8 1493 aa11.49□□□□□ -0.57
ZNF542P-202ENST00000467807 DCAF8L2P0C7V8 631 aa11.48□□□□□ -0.57
ZNF542P-202ENST00000467807 NACADO15069 1562 aa11.48□□□□□ -0.57
ZNF542P-202ENST00000467807 SCRIBQ14160 1630 aa11.37□□□□□ -0.59
ZNF542P-202ENST00000467807 RB1CC1Q8TDY2 1594 aa11.37□□□□□ -0.59
ZNF542P-202ENST00000467807 UNC13AQ9UPW8 1703 aa11.32□□□□□ -0.6
ZNF542P-202ENST00000467807 SUPT5HO00267 1087 aaKnown RBP11.2□□□□□ -0.62
ZNF542P-202ENST00000467807 BICRAQ9NZM4 1560 aa11.13□□□□□ -0.63
ZNF542P-202ENST00000467807 HRCP23327 699 aa11.09□□□□□ -0.63
ZNF542P-202ENST00000467807 CECR2Q9BXF3 1484 aa11.02□□□□□ -0.64
ZNF542P-202ENST00000467807 PCGF6Q9BYE7 350 aa11.02□□□□□ -0.64
ZNF542P-202ENST00000467807 PPARGC1BQ86YN6 1023 aaKnown RBP11□□□□□ -0.65
ZNF542P-202ENST00000467807 RSF1Q96T23 1441 aaPredicted RBP11□□□□□ -0.65
ZNF542P-202ENST00000467807 MROH2BQ7Z745 1585 aa10.98□□□□□ -0.65
ZNF542P-202ENST00000467807 BAZ1AQ9NRL2 1556 aaPredicted RBP10.93□□□□□ -0.66
ZNF542P-202ENST00000467807 SMARCA4P51532 1647 aa10.93□□□□□ -0.66
ZNF542P-202ENST00000467807 WIZO95785 1651 aa10.92□□□□□ -0.66
ZNF542P-202ENST00000467807 PABPN1Q86U42 306 aaKnown RBP eCLIP10.9□□□□□ -0.66
ZNF542P-202ENST00000467807 CHIC1Q5VXU3 224 aa10.86□□□□□ -0.67
ZNF542P-202ENST00000467807 PEG3Q9GZU2 1588 aa10.82□□□□□ -0.68
ZNF542P-202ENST00000467807 TOP2AP11388 1531 aaKnown RBP10.76□□□□□ -0.69
ZNF542P-202ENST00000467807 EIF4G1Q04637 1599 aaKnown RBP10.73□□□□□ -0.69
ZNF542P-202ENST00000467807 LOC105371045A0A1W2PR82 267 aa10.71□□□□□ -0.69
ZNF542P-202ENST00000467807 ATAD2BQ9ULI0 1458 aa10.69□□□□□ -0.7
ZNF542P-202ENST00000467807 SMARCA2P51531 1590 aa10.69□□□□□ -0.7
ZNF542P-202ENST00000467807 CCDC88BA6NC98 1476 aa10.64□□□□□ -0.71
ZNF542P-202ENST00000467807 HMGXB3Q12766 1538 aa10.61□□□□□ -0.71
ZNF542P-202ENST00000467807 BAZ1BQ9UIG0 1483 aaKnown RBP10.6□□□□□ -0.71
ZNF542P-202ENST00000467807 NCAPD3P42695 1498 aa10.59□□□□□ -0.71
ZNF542P-202ENST00000467807 CC2D2AQ9P2K1 1620 aa10.57□□□□□ -0.72
ZNF542P-202ENST00000467807 TRIM26Q12899 539 aaPredicted RBP10.57□□□□□ -0.72
ZNF542P-202ENST00000467807 PELP1Q8IZL8 1130 aaKnown RBP10.55□□□□□ -0.72
ZNF542P-202ENST00000467807 AEBP2Q6ZN18 517 aaPredicted RBP10.54□□□□□ -0.72
ZNF542P-202ENST00000467807 SCAF1Q9H7N4 1312 aaKnown RBP10.5□□□□□ -0.73
ZNF542P-202ENST00000467807 EHMT2Q96KQ7 1210 aa10.47□□□□□ -0.73
ZNF542P-202ENST00000467807 ABCC8Q09428 1581 aa10.45□□□□□ -0.74
ZNF542P-202ENST00000467807 PRDM2Q13029 1718 aa10.44□□□□□ -0.74
ZNF542P-202ENST00000467807 ZEB1P37275 1124 aaPredicted RBP10.43□□□□□ -0.74
ZNF542P-202ENST00000467807 FAM9AQ8IZU1 332 aaPredicted RBP10.41□□□□□ -0.74
ZNF542P-202ENST00000467807 CFTRP13569 1480 aa10.38□□□□□ -0.75
ZNF542P-202ENST00000467807 SYNJ1O43426 1573 aa10.36□□□□□ -0.75
ZNF542P-202ENST00000467807 TRIM41Q8WV44 630 aa10.33□□□□□ -0.76
ZNF542P-202ENST00000467807 BIVM-ERCC5R4GMW8 1640 aa10.32□□□□□ -0.76
ZNF542P-202ENST00000467807 TOP2BQ02880 1626 aa10.3□□□□□ -0.76
ZNF542P-202ENST00000467807 WRNQ14191 1432 aaPredicted RBP eCLIP10.3□□□□□ -0.76
ZNF542P-202ENST00000467807 DNAJC5BQ9UF47 199 aa10.29□□□□□ -0.76
ZNF542P-202ENST00000467807 CADPSQ9ULU8 1353 aa10.28□□□□□ -0.76
ZNF542P-202ENST00000467807 NEUROD1Q13562 356 aa10.26□□□□□ -0.77
ZNF542P-202ENST00000467807 CUX1P39880 1505 aa10.26□□□□□ -0.77
ZNF542P-202ENST00000467807 NESP48681 1621 aa10.25□□□□□ -0.77
ZNF542P-202ENST00000467807 ACIN1Q9UKV3 1341 aaKnown RBP10.25□□□□□ -0.77
ZNF542P-202ENST00000467807 LAMC3Q9Y6N6 1575 aa10.24□□□□□ -0.77
ZNF542P-202ENST00000467807 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.24□□□□□ -0.77
ZNF542P-202ENST00000467807 GTF3C3Q9Y5Q9 886 aa10.23□□□□□ -0.77
ZNF542P-202ENST00000467807 SOGA1O94964 1423 aa10.22□□□□□ -0.77
ZNF542P-202ENST00000467807 RUSC2Q8N2Y8 1516 aa10.21□□□□□ -0.77
ZNF542P-202ENST00000467807 CCER1Q8TC90 406 aaPredicted RBP10.21□□□□□ -0.77
ZNF542P-202ENST00000467807 KIF21AQ7Z4S6 1674 aa10.19□□□□□ -0.78
ZNF542P-202ENST00000467807 FANCD2Q9BXW9 1451 aa10.19□□□□□ -0.78
ZNF542P-202ENST00000467807 TTBK1Q5TCY1 1321 aaPredicted RBP10.18□□□□□ -0.78
ZNF542P-202ENST00000467807 CENPBP07199 599 aaPredicted RBP10.15□□□□□ -0.78
ZNF542P-202ENST00000467807 DIEXFQ68CQ4 756 aaKnown RBP10.14□□□□□ -0.79
ZNF542P-202ENST00000467807 EEA1Q15075 1411 aa10.14□□□□□ -0.79
ZNF542P-202ENST00000467807 DNMBPQ6XZF7 1577 aa10.14□□□□□ -0.79
ZNF542P-202ENST00000467807 URB2Q14146 1524 aaKnown RBP10.11□□□□□ -0.79
ZNF542P-202ENST00000467807 KIF21BO75037 1637 aa10.11□□□□□ -0.79
ZNF542P-202ENST00000467807 YTHDC1Q96MU7 727 aaKnown RBP10.11□□□□□ -0.79
ZNF542P-202ENST00000467807 CEP164Q9UPV0 1460 aa10.11□□□□□ -0.79
ZNF542P-202ENST00000467807 TOPBP1Q92547 1522 aa10.11□□□□□ -0.79
ZNF542P-202ENST00000467807 WDR97A6NE52 1622 aa10.11□□□□□ -0.79
ZNF542P-202ENST00000467807 FGD5Q6ZNL6 1462 aa10.1□□□□□ -0.79
ZNF542P-202ENST00000467807 MYT1Q01538 1121 aa10.09□□□□□ -0.79
ZNF542P-202ENST00000467807 PDS5BQ9NTI5 1447 aa10.07□□□□□ -0.8
ZNF542P-202ENST00000467807 POLA1P09884 1462 aaPredicted RBP10.06□□□□□ -0.8
ZNF542P-202ENST00000467807 CSRNP3Q8WYN3 585 aa10.05□□□□□ -0.8
ZNF542P-202ENST00000467807 PRXQ9BXM0 1461 aa10.03□□□□□ -0.8
ZNF542P-202ENST00000467807 ABCA10Q8WWZ4 1543 aa10.03□□□□□ -0.8
ZNF542P-202ENST00000467807 GOLGA3Q08378 1498 aa10.02□□□□□ -0.8
ZNF542P-202ENST00000467807 TARBP1Q13395 1621 aaKnown RBP10.02□□□□□ -0.81
ZNF542P-202ENST00000467807 RAD54L2Q9Y4B4 1467 aa10.02□□□□□ -0.81
ZNF542P-202ENST00000467807 RAPGEF2Q9Y4G8 1499 aa10.02□□□□□ -0.81
ZNF542P-202ENST00000467807 ERICH3Q5RHP9 1530 aa10.02□□□□□ -0.81
ZNF542P-202ENST00000467807 THOC2Q8NI27 1593 aaKnown RBP10.01□□□□□ -0.81
ZNF542P-202ENST00000467807 KIF27Q86VH2 1401 aa10.01□□□□□ -0.81
ZNF542P-202ENST00000467807 ABCA5Q8WWZ7 1642 aa10.01□□□□□ -0.81
ZNF542P-202ENST00000467807 WDR62O43379 1518 aa10□□□□□ -0.81
ZNF542P-202ENST00000467807 CUX2O14529 1486 aa10□□□□□ -0.81
ZNF542P-202ENST00000467807 TNIKQ9UKE5 1360 aa9.99□□□□□ -0.81
ZNF542P-202ENST00000467807 MRC2Q9UBG0 1479 aa9.99□□□□□ -0.81
ZNF542P-202ENST00000467807 IGF1RP08069 1367 aa9.96□□□□□ -0.81
ZNF542P-202ENST00000467807 CEP162Q5TB80 1403 aa9.96□□□□□ -0.82
ZNF542P-202ENST00000467807 PBRM1Q86U86 1689 aa9.94□□□□□ -0.82
ZNF542P-202ENST00000467807 CUL7Q14999 1698 aa9.93□□□□□ -0.82
ZNF542P-202ENST00000467807 ZNF316A6NFI3 1004 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms