RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 AEBP2Q6ZN18 517 aaPredicted RBP33.12■■■□□ 2.89
NUDCD1-204ENST00000521439 CHIC1Q5VXU3 224 aa32.22■■■□□ 2.75
NUDCD1-204ENST00000521439 PHF23Q9BUL5 403 aaPredicted RBP28.26■■■□□ 2.11
NUDCD1-204ENST00000521439 SENP3Q9H4L4 574 aaPredicted RBP28.22■■■□□ 2.11
NUDCD1-204ENST00000521439 FOXD1Q16676 465 aa26.15■■□□□ 1.78
NUDCD1-204ENST00000521439 PLPPR3Q6T4P5 718 aa26.11■■□□□ 1.77
NUDCD1-204ENST00000521439 PPP6R1Q9UPN7 881 aa24.98■■□□□ 1.59
NUDCD1-204ENST00000521439 ADRA2BP18089 450 aa24.96■■□□□ 1.59
NUDCD1-204ENST00000521439 PIAS4Q8N2W9 510 aaPredicted RBP24.65■■□□□ 1.54
NUDCD1-204ENST00000521439 MSH5O43196 834 aa24.26■■□□□ 1.47
NUDCD1-204ENST00000521439 PPP4R3CPQ6ZMV5 832 aa22.95■■□□□ 1.26
NUDCD1-204ENST00000521439 SCAF1Q9H7N4 1312 aaKnown RBP22.93■■□□□ 1.26
NUDCD1-204ENST00000521439 MAPK8IP2Q13387 824 aaPredicted RBP22.69■■□□□ 1.22
NUDCD1-204ENST00000521439 DMRT2Q9Y5R5 561 aa22.47■■□□□ 1.19
NUDCD1-204ENST00000521439 CNKSR2Q8WXI2 1034 aa22.38■■□□□ 1.17
NUDCD1-204ENST00000521439 POTEDQ86YR6 584 aa22.37■■□□□ 1.17
NUDCD1-204ENST00000521439 NCBP3Q53F19 620 aaKnown RBP22.34■■□□□ 1.17
NUDCD1-204ENST00000521439 KCNA4P22459 653 aa22.17■■□□□ 1.14
NUDCD1-204ENST00000521439 RNF216Q9NWF9 866 aaPredicted RBP21.99■■□□□ 1.11
NUDCD1-204ENST00000521439 NPM3O75607 178 aaKnown RBP21.96■■□□□ 1.11
NUDCD1-204ENST00000521439 HOXD11P31277 338 aaPredicted RBP21.94■■□□□ 1.1
NUDCD1-204ENST00000521439 DCAF8L1A6NGE4 600 aa21.49■■□□□ 1.03
NUDCD1-204ENST00000521439 DNAJC5BQ9UF47 199 aa21.41■■□□□ 1.02
NUDCD1-204ENST00000521439 SLC4A1APQ9BWU0 796 aaKnown RBP21.11■□□□□ 0.97
NUDCD1-204ENST00000521439 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.91■□□□□ 0.945e-6■■□□□ 13
NUDCD1-204ENST00000521439 EHMT2Q96KQ7 1210 aa20.85■□□□□ 0.93
NUDCD1-204ENST00000521439 SLC4A2P04920 1241 aa20.76■□□□□ 0.91
NUDCD1-204ENST00000521439 RNF39Q9H2S5 420 aa20.73■□□□□ 0.91
NUDCD1-204ENST00000521439 U3KPZ7 1027 aaPredicted RBP20.53■□□□□ 0.88
NUDCD1-204ENST00000521439 FOXD4L1Q9NU39 408 aa20.52■□□□□ 0.88
NUDCD1-204ENST00000521439 C1QBPQ07021 282 aaKnown RBP20.51■□□□□ 0.87
NUDCD1-204ENST00000521439 CSRNP3Q8WYN3 585 aa20.41■□□□□ 0.86
NUDCD1-204ENST00000521439 ZBTB22O15209 634 aa20.38■□□□□ 0.85
NUDCD1-204ENST00000521439 MYCNP04198 464 aaPredicted RBP20.34■□□□□ 0.85
NUDCD1-204ENST00000521439 CACNB1Q02641 598 aaPredicted RBP20.33■□□□□ 0.85
NUDCD1-204ENST00000521439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.28■□□□□ 0.84
NUDCD1-204ENST00000521439 HNRNPUL2Q1KMD3 747 aaKnown RBP20.28■□□□□ 0.84
NUDCD1-204ENST00000521439 SAMD1Q6SPF0 538 aaPredicted RBP20.18■□□□□ 0.82
NUDCD1-204ENST00000521439 APLP2Q06481 763 aa20.13■□□□□ 0.81
NUDCD1-204ENST00000521439 SPINK5Q9NQ38 1064 aaPredicted RBP19.99■□□□□ 0.79
NUDCD1-204ENST00000521439 CAPN15O75808 1086 aa19.95■□□□□ 0.78
NUDCD1-204ENST00000521439 ZNF219Q9P2Y4 722 aaPredicted RBP19.85■□□□□ 0.77
NUDCD1-204ENST00000521439 ATXN8OSP0DMR3 200 aa19.83■□□□□ 0.77
NUDCD1-204ENST00000521439 TRHP20396 242 aaPredicted RBP19.8■□□□□ 0.76
NUDCD1-204ENST00000521439 ATF5Q9Y2D1 282 aaPredicted RBP19.72■□□□□ 0.75
NUDCD1-204ENST00000521439 DSG3P32926 999 aa19.66■□□□□ 0.74
NUDCD1-204ENST00000521439 ABCB7O75027 752 aa19.53■□□□□ 0.72
NUDCD1-204ENST00000521439 POLA2Q14181 598 aa19.44■□□□□ 0.7
NUDCD1-204ENST00000521439 ZBTB12Q9Y330 459 aaPredicted RBP19.17■□□□□ 0.66
NUDCD1-204ENST00000521439 FBLN2P98095 1184 aa19■□□□□ 0.63
NUDCD1-204ENST00000521439 MKRN4PQ13434 485 aaPredicted RBP18.87■□□□□ 0.61
NUDCD1-204ENST00000521439 RBM42Q9BTD8 480 aaKnown RBP18.8■□□□□ 0.6
NUDCD1-204ENST00000521439 OSCARQ8IYS5 282 aa18.79■□□□□ 0.6
NUDCD1-204ENST00000521439 SPDYE2BA6NHP3 402 aa18.62■□□□□ 0.57
NUDCD1-204ENST00000521439 SPDYE6P0CI01 402 aa18.62■□□□□ 0.57
NUDCD1-204ENST00000521439 SPDYE2Q495Y8 402 aa18.62■□□□□ 0.57
NUDCD1-204ENST00000521439 AKT1S1Q96B36 256 aa18.5■□□□□ 0.55
NUDCD1-204ENST00000521439 ZNF692Q9BU19 519 aaPredicted RBP18.49■□□□□ 0.55
NUDCD1-204ENST00000521439 SSUH2Q9Y2M2 353 aa18.43■□□□□ 0.54
NUDCD1-204ENST00000521439 FKBP8Q14318 412 aa18.41■□□□□ 0.54
NUDCD1-204ENST00000521439 SPDYE4A6NLX3 237 aa18.4■□□□□ 0.54
NUDCD1-204ENST00000521439 REM2Q8IYK8 340 aaPredicted RBP18.29■□□□□ 0.52
NUDCD1-204ENST00000521439 PABPN1Q86U42 306 aaKnown RBP eCLIP18.23■□□□□ 0.51
NUDCD1-204ENST00000521439 SPDYE1Q8NFV5 336 aaPredicted RBP18.11■□□□□ 0.49
NUDCD1-204ENST00000521439 PITPNM1O00562 1244 aa18.08■□□□□ 0.48
NUDCD1-204ENST00000521439 PROM2Q8N271 834 aa18.07■□□□□ 0.48
NUDCD1-204ENST00000521439 CHRDL2Q6WN34 429 aa18.05■□□□□ 0.48
NUDCD1-204ENST00000521439 CLEC11AQ9Y240 323 aa18.01■□□□□ 0.47
NUDCD1-204ENST00000521439 STAG3Q9UJ98 1225 aa17.94■□□□□ 0.46
NUDCD1-204ENST00000521439 PRR29P0C7W0 189 aa17.84■□□□□ 0.45
NUDCD1-204ENST00000521439 FXR2P51116 673 aaKnown RBP eCLIP17.79■□□□□ 0.44
NUDCD1-204ENST00000521439 PIP4P2Q8N4L2 257 aa17.76■□□□□ 0.43
NUDCD1-204ENST00000521439 POTEHQ6S545 545 aa17.7■□□□□ 0.42
NUDCD1-204ENST00000521439 FBXO3Q9UK99 471 aa17.69■□□□□ 0.42
NUDCD1-204ENST00000521439 AMER1Q5JTC6 1135 aaPredicted RBP17.67■□□□□ 0.42
NUDCD1-204ENST00000521439 PRKAR2AP13861 404 aaKnown RBP17.63■□□□□ 0.41
NUDCD1-204ENST00000521439 RTN4Q9NQC3 1192 aaKnown RBP17.62■□□□□ 0.41
NUDCD1-204ENST00000521439 CHADLQ6NUI6 762 aa17.56■□□□□ 0.4
NUDCD1-204ENST00000521439 CREBZFQ9NS37 354 aa17.54■□□□□ 0.4
NUDCD1-204ENST00000521439 PLEKHG5O94827 1062 aa17.46■□□□□ 0.39
NUDCD1-204ENST00000521439 MIER1Q8N108 512 aa17.46■□□□□ 0.39
NUDCD1-204ENST00000521439 PLCD3Q8N3E9 789 aa17.43■□□□□ 0.38
NUDCD1-204ENST00000521439 VASPP50552 380 aaPredicted RBP17.41■□□□□ 0.38
NUDCD1-204ENST00000521439 FARP1Q9Y4F1 1045 aaPredicted RBP17.41■□□□□ 0.38
NUDCD1-204ENST00000521439 MNX1P50219 401 aaPredicted RBP17.32■□□□□ 0.36
NUDCD1-204ENST00000521439 ZBTB47Q9UFB7 747 aaPredicted RBP17.31■□□□□ 0.36
NUDCD1-204ENST00000521439 NPM1P06748 294 aaKnown RBP eCLIP17.3■□□□□ 0.36
NUDCD1-204ENST00000521439 HAX1O00165 279 aa17.25■□□□□ 0.35
NUDCD1-204ENST00000521439 C19orf67A6NJJ6 358 aa17.19■□□□□ 0.34
NUDCD1-204ENST00000521439 IFNLR1Q8IU57 520 aaPredicted RBP17.17■□□□□ 0.34
NUDCD1-204ENST00000521439 KLHL34Q8N239 644 aa17.16■□□□□ 0.34
NUDCD1-204ENST00000521439 CD44P16070 742 aaKnown RBP17.12■□□□□ 0.33
NUDCD1-204ENST00000521439 PAK3O75914 559 aaPredicted RBP17.06■□□□□ 0.32
NUDCD1-204ENST00000521439 EVX2Q03828 476 aa17.03■□□□□ 0.32
NUDCD1-204ENST00000521439 NUBP1P53384 320 aa17.02■□□□□ 0.32
NUDCD1-204ENST00000521439 RASEFQ8IZ41 740 aa17■□□□□ 0.31
NUDCD1-204ENST00000521439 SPOCK2Q92563 424 aa16.99■□□□□ 0.31
NUDCD1-204ENST00000521439 ZRANB1Q9UGI0 708 aa16.99■□□□□ 0.31
NUDCD1-204ENST00000521439 TSPYL2Q9H2G4 693 aaPredicted RBP16.95■□□□□ 0.3
NUDCD1-204ENST00000521439 SP7Q8TDD2 431 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms