RNA–Protein interactions for RNA: ENST00000614860.1

USPL1-203, Transcript of ubiquitin specific peptidase like 1, humanhuman

TSL 1 (best) BASIC

Gene USPL1, Length 4,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1-203ENST00000614860 NISCHQ9Y2I1 1504 aa14.88□□□□□ -0.03
USPL1-203ENST00000614860 DCAF8L2P0C7V8 631 aa13.24□□□□□ -0.29
USPL1-203ENST00000614860 SHROOM4Q9ULL8 1493 aa13.01□□□□□ -0.33
USPL1-203ENST00000614860 SUPT5HO00267 1087 aaKnown RBP12.65□□□□□ -0.38
USPL1-203ENST00000614860 ZCCHC6Q5VYS8 1495 aaKnown RBP12.52□□□□□ -0.4
USPL1-203ENST00000614860 CCDC180Q9P1Z9 1646 aa12.49□□□□□ -0.41
USPL1-203ENST00000614860 ABCC9O60706 1549 aa12.13□□□□□ -0.47
USPL1-203ENST00000614860 CHIC1Q5VXU3 224 aa12.08□□□□□ -0.48
USPL1-203ENST00000614860 MYO15BQ96JP2 1530 aa12.08□□□□□ -0.48
USPL1-203ENST00000614860 SCRIBQ14160 1630 aa12.03□□□□□ -0.48
USPL1-203ENST00000614860 DCAF1Q9Y4B6 1507 aa11.98□□□□□ -0.49
USPL1-203ENST00000614860 LOC105371045A0A1W2PR82 267 aa11.93□□□□□ -0.5
USPL1-203ENST00000614860 EHMT2Q96KQ7 1210 aa11.86□□□□□ -0.51
USPL1-203ENST00000614860 CECR2Q9BXF3 1484 aa11.83□□□□□ -0.52
USPL1-203ENST00000614860 RSF1Q96T23 1441 aaPredicted RBP11.82□□□□□ -0.52
USPL1-203ENST00000614860 FAM9AQ8IZU1 332 aaPredicted RBP11.77□□□□□ -0.53
USPL1-203ENST00000614860 PABPN1Q86U42 306 aaKnown RBP eCLIP11.72□□□□□ -0.53
USPL1-203ENST00000614860 RB1CC1Q8TDY2 1594 aa11.71□□□□□ -0.54
USPL1-203ENST00000614860 MROH2BQ7Z745 1585 aa11.69□□□□□ -0.54
USPL1-203ENST00000614860 PCGF6Q9BYE7 350 aa11.68□□□□□ -0.54
USPL1-203ENST00000614860 NACADO15069 1562 aa11.65□□□□□ -0.54
USPL1-203ENST00000614860 WIZO95785 1651 aa11.63□□□□□ -0.55
USPL1-203ENST00000614860 TRIM41Q8WV44 630 aa11.63□□□□□ -0.55
USPL1-203ENST00000614860 PPARGC1BQ86YN6 1023 aaKnown RBP11.53□□□□□ -0.56
USPL1-203ENST00000614860 UNC13AQ9UPW8 1703 aa11.5□□□□□ -0.57
USPL1-203ENST00000614860 ABCC8Q09428 1581 aa11.39□□□□□ -0.59
USPL1-203ENST00000614860 HRCP23327 699 aa11.39□□□□□ -0.59
USPL1-203ENST00000614860 RANGAP1P46060 587 aaPredicted RBP11.39□□□□□ -0.59
USPL1-203ENST00000614860 TTBK1Q5TCY1 1321 aaPredicted RBP11.38□□□□□ -0.59
USPL1-203ENST00000614860 BICRAQ9NZM4 1560 aa11.38□□□□□ -0.59
USPL1-203ENST00000614860 CCDC88BA6NC98 1476 aa11.36□□□□□ -0.59
USPL1-203ENST00000614860 BAZ1AQ9NRL2 1556 aaPredicted RBP11.36□□□□□ -0.59
USPL1-203ENST00000614860 SMARCA4P51532 1647 aa11.35□□□□□ -0.59
USPL1-203ENST00000614860 RUSC2Q8N2Y8 1516 aa11.28□□□□□ -0.6
USPL1-203ENST00000614860 SMARCA2P51531 1590 aa11.27□□□□□ -0.6
USPL1-203ENST00000614860 SOGA1O94964 1423 aa11.27□□□□□ -0.61
USPL1-203ENST00000614860 TRIM26Q12899 539 aaPredicted RBP11.26□□□□□ -0.61
USPL1-203ENST00000614860 TOP2AP11388 1531 aaKnown RBP11.25□□□□□ -0.61
USPL1-203ENST00000614860 EIF4G1Q04637 1599 aaKnown RBP11.25□□□□□ -0.61
USPL1-203ENST00000614860 APLP2Q06481 763 aa11.18□□□□□ -0.62
USPL1-203ENST00000614860 ATP1B4Q9UN42 357 aaPredicted RBP11.17□□□□□ -0.62
USPL1-203ENST00000614860 ATAD2BQ9ULI0 1458 aa11.15□□□□□ -0.63
USPL1-203ENST00000614860 UBTFP17480 764 aaKnown RBP11.14□□□□□ -0.63
USPL1-203ENST00000614860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.1□□□□□ -0.63
USPL1-203ENST00000614860 BAZ1BQ9UIG0 1483 aaKnown RBP11.09□□□□□ -0.63
USPL1-203ENST00000614860 CSRNP3Q8WYN3 585 aa11.09□□□□□ -0.63
USPL1-203ENST00000614860 SYNJ1O43426 1573 aa11.06□□□□□ -0.64
USPL1-203ENST00000614860 WRNQ14191 1432 aaPredicted RBP eCLIP11.06□□□□□ -0.64
USPL1-203ENST00000614860 CEP162Q5TB80 1403 aa11.02□□□□□ -0.64
USPL1-203ENST00000614860 PEG3Q9GZU2 1588 aa11.01□□□□□ -0.65
USPL1-203ENST00000614860 DNAJC5BQ9UF47 199 aa11□□□□□ -0.65
USPL1-203ENST00000614860 RAPGEF2Q9Y4G8 1499 aa10.94□□□□□ -0.66
USPL1-203ENST00000614860 TNIKQ9UKE5 1360 aa10.92□□□□□ -0.66
USPL1-203ENST00000614860 CCER1Q8TC90 406 aaPredicted RBP10.91□□□□□ -0.66
USPL1-203ENST00000614860 HNRNPUL2Q1KMD3 747 aaKnown RBP10.9□□□□□ -0.66
USPL1-203ENST00000614860 NCAPD3P42695 1498 aa10.87□□□□□ -0.67
USPL1-203ENST00000614860 GOLGA3Q08378 1498 aa10.87□□□□□ -0.67
USPL1-203ENST00000614860 CUX1P39880 1505 aa10.85□□□□□ -0.67
USPL1-203ENST00000614860 CLIP1P30622 1438 aa10.83□□□□□ -0.68
USPL1-203ENST00000614860 FBLN2P98095 1184 aa10.81□□□□□ -0.68
USPL1-203ENST00000614860 KANK4Q5T7N3 995 aaPredicted RBP10.81□□□□□ -0.68
USPL1-203ENST00000614860 TOP2BQ02880 1626 aa10.81□□□□□ -0.68
USPL1-203ENST00000614860 NESP48681 1621 aa10.8□□□□□ -0.68
USPL1-203ENST00000614860 CEP164Q9UPV0 1460 aa10.8□□□□□ -0.68
USPL1-203ENST00000614860 EEA1Q15075 1411 aa10.8□□□□□ -0.68
USPL1-203ENST00000614860 CC2D2AQ9P2K1 1620 aa10.79□□□□□ -0.68
USPL1-203ENST00000614860 P3H3Q8IVL6 736 aa10.79□□□□□ -0.68
USPL1-203ENST00000614860 CFTRP13569 1480 aa10.78□□□□□ -0.68
USPL1-203ENST00000614860 HMGXB3Q12766 1538 aa10.77□□□□□ -0.69
USPL1-203ENST00000614860 ITGAEP38570 1179 aa10.75□□□□□ -0.69
USPL1-203ENST00000614860 KIF21BO75037 1637 aa10.75□□□□□ -0.69
USPL1-203ENST00000614860 ZEB1P37275 1124 aaPredicted RBP10.74□□□□□ -0.69
USPL1-203ENST00000614860 CADPSQ9ULU8 1353 aa10.73□□□□□ -0.69
USPL1-203ENST00000614860 MYT1LQ9UL68 1186 aa10.73□□□□□ -0.69
USPL1-203ENST00000614860 BIVM-ERCC5R4GMW8 1640 aa10.72□□□□□ -0.69
USPL1-203ENST00000614860 ARAP1Q96P48 1450 aa10.71□□□□□ -0.69
USPL1-203ENST00000614860 RAD54L2Q9Y4B4 1467 aa10.71□□□□□ -0.69
USPL1-203ENST00000614860 CUX2O14529 1486 aa10.71□□□□□ -0.69
USPL1-203ENST00000614860 PRXQ9BXM0 1461 aa10.71□□□□□ -0.69
USPL1-203ENST00000614860 VPS8Q8N3P4 1428 aa10.71□□□□□ -0.7
USPL1-203ENST00000614860 IGF1RP08069 1367 aa10.7□□□□□ -0.7
USPL1-203ENST00000614860 FGD5Q6ZNL6 1462 aa10.68□□□□□ -0.7
USPL1-203ENST00000614860 KIF27Q86VH2 1401 aa10.68□□□□□ -0.7
USPL1-203ENST00000614860 FANCD2Q9BXW9 1451 aa10.65□□□□□ -0.7
USPL1-203ENST00000614860 ARHGAP35Q9NRY4 1499 aa10.63□□□□□ -0.71
USPL1-203ENST00000614860 ARID3CA6NKF2 412 aa10.63□□□□□ -0.71
USPL1-203ENST00000614860 TDRD9Q8NDG6 1382 aaKnown RBP10.62□□□□□ -0.71
USPL1-203ENST00000614860 CARMIL1Q5VZK9 1371 aa10.62□□□□□ -0.71
USPL1-203ENST00000614860 DIEXFQ68CQ4 756 aaKnown RBP10.59□□□□□ -0.71
USPL1-203ENST00000614860 POLA1P09884 1462 aaPredicted RBP10.57□□□□□ -0.72
USPL1-203ENST00000614860 ERICH3Q5RHP9 1530 aa10.56□□□□□ -0.72
USPL1-203ENST00000614860 TOPBP1Q92547 1522 aa10.55□□□□□ -0.72
USPL1-203ENST00000614860 SCAF1Q9H7N4 1312 aaKnown RBP10.54□□□□□ -0.72
USPL1-203ENST00000614860 URB2Q14146 1524 aaKnown RBP10.54□□□□□ -0.72
USPL1-203ENST00000614860 FHOD3Q2V2M9 1422 aa10.54□□□□□ -0.72
USPL1-203ENST00000614860 YTHDC1Q96MU7 727 aaKnown RBP10.53□□□□□ -0.72
USPL1-203ENST00000614860 FAM50AQ14320 339 aaKnown RBP10.51□□□□□ -0.73
USPL1-203ENST00000614860 PRDM2Q13029 1718 aa10.51□□□□□ -0.73
USPL1-203ENST00000614860 NEUROD1Q13562 356 aa10.51□□□□□ -0.73
USPL1-203ENST00000614860 PHLDB1Q86UU1 1377 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms